EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023322 (Gene tree)
Gene ID: 106951347
Gene Symbol: chd7
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 7-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 93661 bases
Position: chrKQ545768.1:152038-245698
Accession: 106951347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000031376	ResIII	PF04851.15	6.7e-06	1	1
ENSPLAP00000031376	BRK	PF07533.16	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031935	-	12028	XM_015038805	ENSPLAP00000031376	3288 (aa)	XP_014894291	UPI00072DF37D

Gene Model

Click here to download ENSPLAG00000023322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023322	chd7	58	59.511	ENSPLAG00000003128	chd6	53	63.733

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023322	chd7	68	79.250	ENSG00000171316	CHD7	71	78.807	Homo_sapiens
ENSPLAG00000023322	chd7	50	66.149	ENSG00000100888	CHD8	86	85.227	Homo_sapiens
ENSPLAG00000023322	chd7	82	84.865	ENSAPOG00000009351	chd7	98	82.511	Acanthochromis_polyacanthus
ENSPLAG00000023322	chd7	50	66.517	ENSAMEG00000006307	CHD8	60	68.908	Ailuropoda_melanoleuca
ENSPLAG00000023322	chd7	50	59.388	ENSACIG00000006440	chd8	60	63.963	Amphilophus_citrinellus
ENSPLAG00000023322	chd7	70	87.957	ENSACIG00000001590	chd7	98	94.180	Amphilophus_citrinellus
ENSPLAG00000023322	chd7	69	93.492	ENSAOCG00000002337	chd7	97	93.557	Amphiprion_ocellaris
ENSPLAG00000023322	chd7	99	84.678	ENSAPEG00000010332	chd7	99	84.451	Amphiprion_percula
ENSPLAG00000023322	chd7	70	85.409	ENSATEG00000002590	chd7	95	95.004	Anabas_testudineus
ENSPLAG00000023322	chd7	70	78.852	ENSACAG00000005760	CHD7	72	78.571	Anolis_carolinensis
ENSPLAG00000023322	chd7	50	66.667	ENSANAG00000037714	CHD8	65	69.072	Aotus_nancymaae
ENSPLAG00000023322	chd7	50	66.667	ENSACLG00000019692	chd8	71	64.075	Astatotilapia_calliptera
ENSPLAG00000023322	chd7	70	79.553	ENSBTAG00000021841	CHD7	78	78.997	Bos_taurus
ENSPLAG00000023322	chd7	50	66.592	ENSBTAG00000020422	CHD8	68	69.072	Bos_taurus
ENSPLAG00000023322	chd7	50	66.742	ENSCJAG00000009002	CHD8	65	69.151	Callithrix_jacchus
ENSPLAG00000023322	chd7	70	79.553	ENSCHIG00000011729	CHD7	71	79.075	Capra_hircus
ENSPLAG00000023322	chd7	50	66.667	ENSCHIG00000026157	CHD8	61	69.072	Capra_hircus
ENSPLAG00000023322	chd7	50	65.106	ENSTSYG00000004018	CHD7	71	78.650	Carlito_syrichta
ENSPLAG00000023322	chd7	68	74.701	ENSCAPG00000007952	CHD7	71	74.391	Cavia_aperea
ENSPLAG00000023322	chd7	50	62.431	ENSCAPG00000016749	CHD8	59	62.948	Cavia_aperea
ENSPLAG00000023322	chd7	68	79.569	ENSCPOG00000013385	CHD7	71	79.356	Cavia_porcellus
ENSPLAG00000023322	chd7	50	66.392	ENSCPOG00000002538	CHD8	60	68.780	Cavia_porcellus
ENSPLAG00000023322	chd7	50	66.742	ENSCCAG00000020467	CHD8	65	69.151	Cebus_capucinus
ENSPLAG00000023322	chd7	68	79.250	ENSCATG00000020229	CHD7	72	78.807	Cercocebus_atys
ENSPLAG00000023322	chd7	50	66.742	ENSCATG00000004861	CHD8	65	69.151	Cercocebus_atys
ENSPLAG00000023322	chd7	51	66.592	ENSCSAG00000016489	CHD8	58	68.993	Chlorocebus_sabaeus
ENSPLAG00000023322	chd7	68	79.170	ENSCSAG00000014349	CHD7	72	78.728	Chlorocebus_sabaeus
ENSPLAG00000023322	chd7	52	80.893	ENSCHOG00000008478	CHD7	76	78.784	Choloepus_hoffmanni
ENSPLAG00000023322	chd7	78	81.505	ENSCPBG00000021517	CHD7	91	79.259	Chrysemys_picta_bellii
ENSPLAG00000023322	chd7	68	79.090	ENSCANG00000041382	CHD7	72	78.650	Colobus_angolensis_palliatus
ENSPLAG00000023322	chd7	50	66.742	ENSCANG00000042948	CHD8	65	69.151	Colobus_angolensis_palliatus
ENSPLAG00000023322	chd7	86	79.665	ENSCGRG00001011949	Chd7	75	79.121	Cricetulus_griseus_chok1gshd
ENSPLAG00000023322	chd7	50	66.223	ENSCGRG00001014351	Chd8	60	69.231	Cricetulus_griseus_chok1gshd
ENSPLAG00000023322	chd7	50	66.223	ENSCGRG00000009710	Chd8	63	69.231	Cricetulus_griseus_crigri
ENSPLAG00000023322	chd7	82	74.431	ENSCGRG00000000481	Chd7	64	74.254	Cricetulus_griseus_crigri
ENSPLAG00000023322	chd7	70	84.245	ENSCSEG00000017886	chd7	99	74.841	Cynoglossus_semilaevis
ENSPLAG00000023322	chd7	100	90.414	ENSCVAG00000017584	chd7	100	90.928	Cyprinodon_variegatus
ENSPLAG00000023322	chd7	71	82.322	ENSDARG00000075211	chd7	61	82.247	Danio_rerio
ENSPLAG00000023322	chd7	54	62.983	ENSDNOG00000005838	CHD8	57	69.206	Dasypus_novemcinctus
ENSPLAG00000023322	chd7	68	79.968	ENSDNOG00000011674	CHD7	50	79.183	Dasypus_novemcinctus
ENSPLAG00000023322	chd7	68	79.266	ENSDORG00000003515	Chd7	75	78.571	Dipodomys_ordii
ENSPLAG00000023322	chd7	54	65.043	ENSETEG00000012353	CHD8	63	68.471	Echinops_telfairi
ENSPLAG00000023322	chd7	55	76.911	ENSETEG00000016689	-	54	77.496	Echinops_telfairi
ENSPLAG00000023322	chd7	55	63.784	ENSEBUG00000007607	chd8	64	69.944	Eptatretus_burgeri
ENSPLAG00000023322	chd7	50	66.517	ENSEASG00005010882	CHD8	69	67.834	Equus_asinus_asinus
ENSPLAG00000023322	chd7	50	66.592	ENSECAG00000016102	CHD8	61	68.993	Equus_caballus
ENSPLAG00000023322	chd7	76	79.696	ENSECAG00000001445	CHD7	78	78.885	Equus_caballus
ENSPLAG00000023322	chd7	76	83.895	ENSEEUG00000013559	CHD7	69	78.249	Erinaceus_europaeus
ENSPLAG00000023322	chd7	94	60.078	ENSELUG00000024442	chd7	93	77.571	Esox_lucius
ENSPLAG00000023322	chd7	50	66.667	ENSFCAG00000013859	CHD8	62	69.072	Felis_catus
ENSPLAG00000023322	chd7	88	79.407	ENSFDAG00000000528	CHD7	75	78.964	Fukomys_damarensis
ENSPLAG00000023322	chd7	100	90.462	ENSFHEG00000001311	chd7	100	90.522	Fundulus_heteroclitus
ENSPLAG00000023322	chd7	58	85.965	ENSGMOG00000004232	chd7	81	85.684	Gadus_morhua
ENSPLAG00000023322	chd7	50	79.373	ENSGALG00000041080	CHD7	71	79.121	Gallus_gallus
ENSPLAG00000023322	chd7	81	96.760	ENSGAFG00000006858	chd7	97	96.760	Gambusia_affinis
ENSPLAG00000023322	chd7	70	81.415	ENSGACG00000014897	chd7	99	74.408	Gasterosteus_aculeatus
ENSPLAG00000023322	chd7	71	80.957	ENSGAGG00000017996	CHD7	92	79.326	Gopherus_agassizii
ENSPLAG00000023322	chd7	50	66.149	ENSGGOG00000002251	CHD8	65	69.151	Gorilla_gorilla
ENSPLAG00000023322	chd7	68	79.330	ENSGGOG00000012224	CHD7	75	78.885	Gorilla_gorilla
ENSPLAG00000023322	chd7	99	82.764	ENSHBUG00000019225	chd7	99	82.739	Haplochromis_burtoni
ENSPLAG00000023322	chd7	50	59.179	ENSHBUG00000002850	chd8	60	63.516	Haplochromis_burtoni
ENSPLAG00000023322	chd7	99	77.325	ENSHCOG00000014380	chd7	99	79.927	Hippocampus_comes
ENSPLAG00000023322	chd7	77	65.914	ENSIPUG00000007585	chd7	93	74.032	Ictalurus_punctatus
ENSPLAG00000023322	chd7	57	66.223	ENSSTOG00000001854	CHD8	58	69.151	Ictidomys_tridecemlineatus
ENSPLAG00000023322	chd7	74	79.506	ENSJJAG00000022064	Chd7	72	78.885	Jaculus_jaculus
ENSPLAG00000023322	chd7	50	66.223	ENSJJAG00000000408	Chd8	60	69.231	Jaculus_jaculus
ENSPLAG00000023322	chd7	99	86.966	ENSKMAG00000009724	chd7	100	85.975	Kryptolebias_marmoratus
ENSPLAG00000023322	chd7	100	79.018	ENSLBEG00000020842	chd7	100	78.988	Labrus_bergylta
ENSPLAG00000023322	chd7	52	66.954	ENSLACG00000011367	CHD8	65	66.824	Latimeria_chalumnae
ENSPLAG00000023322	chd7	64	81.009	ENSLOCG00000005062	chd7	69	81.825	Lepisosteus_oculatus
ENSPLAG00000023322	chd7	50	61.905	ENSLAFG00000000403	CHD7	69	78.448	Loxodonta_africana
ENSPLAG00000023322	chd7	68	79.250	ENSMFAG00000041825	CHD7	85	78.807	Macaca_fascicularis
ENSPLAG00000023322	chd7	50	66.742	ENSMFAG00000035402	CHD8	65	69.151	Macaca_fascicularis
ENSPLAG00000023322	chd7	68	79.250	ENSMMUG00000011584	CHD7	72	78.807	Macaca_mulatta
ENSPLAG00000023322	chd7	50	66.742	ENSMMUG00000015002	CHD8	65	69.151	Macaca_mulatta
ENSPLAG00000023322	chd7	50	66.742	ENSMNEG00000031076	CHD8	65	69.151	Macaca_nemestrina
ENSPLAG00000023322	chd7	68	79.250	ENSMNEG00000040978	CHD7	71	78.807	Macaca_nemestrina
ENSPLAG00000023322	chd7	50	66.742	ENSMLEG00000035911	CHD8	65	69.151	Mandrillus_leucophaeus
ENSPLAG00000023322	chd7	68	79.250	ENSMLEG00000038817	CHD7	72	78.807	Mandrillus_leucophaeus
ENSPLAG00000023322	chd7	98	80.926	ENSMAMG00000011569	chd7	100	79.413	Mastacembelus_armatus
ENSPLAG00000023322	chd7	99	82.672	ENSMZEG00005010646	chd7	99	82.678	Maylandia_zebra
ENSPLAG00000023322	chd7	50	59.594	ENSMZEG00005012027	chd8	60	64.016	Maylandia_zebra
ENSPLAG00000023322	chd7	68	79.216	ENSMGAG00000011092	CHD7	71	79.121	Meleagris_gallopavo
ENSPLAG00000023322	chd7	83	81.715	ENSMAUG00000001000	Chd7	69	81.627	Mesocricetus_auratus
ENSPLAG00000023322	chd7	69	79.409	ENSMICG00000002430	CHD7	71	79.042	Microcebus_murinus
ENSPLAG00000023322	chd7	69	79.616	ENSMOCG00000011408	Chd7	71	78.885	Microtus_ochrogaster
ENSPLAG00000023322	chd7	73	79.435	ENSMODG00000008488	CHD7	71	79.340	Monodelphis_domestica
ENSPLAG00000023322	chd7	74	83.130	ENSMALG00000004389	chd7	99	82.859	Monopterus_albus
ENSPLAG00000023322	chd7	50	66.297	MGP_CAROLIEiJ_G0019237	Chd8	67	69.310	Mus_caroli
ENSPLAG00000023322	chd7	87	79.426	MGP_CAROLIEiJ_G0025797	Chd7	72	78.807	Mus_caroli
ENSPLAG00000023322	chd7	87	79.426	ENSMUSG00000041235	Chd7	71	78.807	Mus_musculus
ENSPLAG00000023322	chd7	50	66.297	ENSMUSG00000053754	Chd8	74	63.516	Mus_musculus
ENSPLAG00000023322	chd7	70	79.426	MGP_PahariEiJ_G0023920	Chd7	55	78.807	Mus_pahari
ENSPLAG00000023322	chd7	50	66.223	MGP_PahariEiJ_G0030258	Chd8	67	69.231	Mus_pahari
ENSPLAG00000023322	chd7	87	79.506	MGP_SPRETEiJ_G0026745	Chd7	72	78.885	Mus_spretus
ENSPLAG00000023322	chd7	58	79.409	ENSMPUG00000002338	CHD7	75	78.885	Mustela_putorius_furo
ENSPLAG00000023322	chd7	50	66.667	ENSMPUG00000000174	CHD8	54	69.072	Mustela_putorius_furo
ENSPLAG00000023322	chd7	50	66.742	ENSMLUG00000001878	CHD8	57	69.151	Myotis_lucifugus
ENSPLAG00000023322	chd7	94	59.712	ENSNGAG00000010767	Chd7	72	78.650	Nannospalax_galili
ENSPLAG00000023322	chd7	74	79.012	ENSNBRG00000001280	chd7	68	86.074	Neolamprologus_brichardi
ENSPLAG00000023322	chd7	50	59.734	ENSNBRG00000017428	chd8	59	64.173	Neolamprologus_brichardi
ENSPLAG00000023322	chd7	68	74.370	ENSMEUG00000010045	CHD7	62	73.980	Notamacropus_eugenii
ENSPLAG00000023322	chd7	50	66.592	ENSODEG00000001047	CHD8	58	69.072	Octodon_degus
ENSPLAG00000023322	chd7	98	76.581	ENSONIG00000016614	chd7	100	76.928	Oreochromis_niloticus
ENSPLAG00000023322	chd7	50	66.667	ENSONIG00000015569	chd8	61	66.667	Oreochromis_niloticus
ENSPLAG00000023322	chd7	74	79.569	ENSOCUG00000010034	CHD7	89	79.042	Oryctolagus_cuniculus
ENSPLAG00000023322	chd7	98	82.905	ENSORLG00000013492	chd7	99	82.044	Oryzias_latipes
ENSPLAG00000023322	chd7	98	82.707	ENSORLG00020020002	chd7	99	81.955	Oryzias_latipes_hni
ENSPLAG00000023322	chd7	98	82.824	ENSORLG00015020858	chd7	99	82.019	Oryzias_latipes_hsok
ENSPLAG00000023322	chd7	98	83.226	ENSOMEG00000016881	chd7	99	82.504	Oryzias_melastigma
ENSPLAG00000023322	chd7	50	64.681	ENSOGAG00000013905	CHD7	72	78.964	Otolemur_garnettii
ENSPLAG00000023322	chd7	54	66.223	ENSOGAG00000002722	CHD8	57	69.151	Otolemur_garnettii
ENSPLAG00000023322	chd7	50	66.617	ENSOARG00000019643	CHD8	61	69.017	Ovis_aries
ENSPLAG00000023322	chd7	67	79.365	ENSOARG00000016176	CHD7	70	78.840	Ovis_aries
ENSPLAG00000023322	chd7	68	79.250	ENSPPAG00000033330	CHD7	71	78.807	Pan_paniscus
ENSPLAG00000023322	chd7	53	65.760	ENSPPAG00000039987	CHD8	58	68.716	Pan_paniscus
ENSPLAG00000023322	chd7	50	66.667	ENSPPRG00000006591	CHD8	68	69.072	Panthera_pardus
ENSPLAG00000023322	chd7	69	79.330	ENSPPRG00000022248	CHD7	71	78.712	Panthera_pardus
ENSPLAG00000023322	chd7	65	78.309	ENSPTIG00000011702	CHD7	70	78.177	Panthera_tigris_altaica
ENSPLAG00000023322	chd7	50	66.667	ENSPTIG00000021989	CHD8	68	69.072	Panthera_tigris_altaica
ENSPLAG00000023322	chd7	68	79.250	ENSPTRG00000020286	CHD7	71	78.807	Pan_troglodytes
ENSPLAG00000023322	chd7	50	66.075	ENSPTRG00000006124	CHD8	65	69.072	Pan_troglodytes
ENSPLAG00000023322	chd7	68	79.250	ENSPANG00000018419	CHD7	72	78.807	Papio_anubis
ENSPLAG00000023322	chd7	50	66.742	ENSPANG00000011742	CHD8	65	69.151	Papio_anubis
ENSPLAG00000023322	chd7	78	65.064	ENSPKIG00000009637	chd7	52	75.082	Paramormyrops_kingsleyae
ENSPLAG00000023322	chd7	50	66.667	ENSPKIG00000009142	chd8	58	67.066	Paramormyrops_kingsleyae
ENSPLAG00000023322	chd7	63	79.952	ENSPSIG00000012003	CHD7	74	79.419	Pelodiscus_sinensis
ENSPLAG00000023322	chd7	71	86.397	ENSPMGG00000018543	chd7	98	85.971	Periophthalmus_magnuspinnatus
ENSPLAG00000023322	chd7	50	66.223	ENSPEMG00000022977	Chd8	60	69.756	Peromyscus_maniculatus_bairdii
ENSPLAG00000023322	chd7	86	80.365	ENSPEMG00000023028	Chd7	72	80.331	Peromyscus_maniculatus_bairdii
ENSPLAG00000023322	chd7	51	65.507	ENSPCIG00000020931	CHD8	70	70.825	Phascolarctos_cinereus
ENSPLAG00000023322	chd7	68	81.214	ENSPCIG00000000025	-	71	79.830	Phascolarctos_cinereus
ENSPLAG00000023322	chd7	57	65.385	ENSPFOG00000010939	-	82	65.432	Poecilia_formosa
ENSPLAG00000023322	chd7	100	99.272	ENSPFOG00000004891	chd7	100	99.272	Poecilia_formosa
ENSPLAG00000023322	chd7	77	84.667	ENSPMEG00000005879	chd7	99	84.667	Poecilia_mexicana
ENSPLAG00000023322	chd7	57	96.687	ENSPREG00000014744	chd7	80	96.687	Poecilia_reticulata
ENSPLAG00000023322	chd7	50	66.149	ENSPPYG00000005596	CHD8	61	69.151	Pongo_abelii
ENSPLAG00000023322	chd7	68	79.250	ENSPPYG00000018618	CHD7	75	78.807	Pongo_abelii
ENSPLAG00000023322	chd7	74	76.966	ENSPCAG00000000227	CHD7	60	76.647	Procavia_capensis
ENSPLAG00000023322	chd7	57	65.706	ENSPCOG00000014628	CHD8	61	68.022	Propithecus_coquereli
ENSPLAG00000023322	chd7	50	65.957	ENSPCOG00000013850	CHD7	72	78.807	Propithecus_coquereli
ENSPLAG00000023322	chd7	50	66.667	ENSPVAG00000000272	CHD8	64	69.127	Pteropus_vampyrus
ENSPLAG00000023322	chd7	63	82.386	ENSPVAG00000011873	CHD7	64	82.292	Pteropus_vampyrus
ENSPLAG00000023322	chd7	50	59.371	ENSPNYG00000018020	chd8	60	63.006	Pundamilia_nyererei
ENSPLAG00000023322	chd7	74	77.140	ENSPNYG00000012490	chd7	98	87.317	Pundamilia_nyererei
ENSPLAG00000023322	chd7	63	77.729	ENSPNAG00000011245	chd7	65	77.656	Pygocentrus_nattereri
ENSPLAG00000023322	chd7	92	63.830	ENSRNOG00000006689	Chd7	71	79.121	Rattus_norvegicus
ENSPLAG00000023322	chd7	50	66.075	ENSRNOG00000025011	Chd8	60	69.072	Rattus_norvegicus
ENSPLAG00000023322	chd7	68	78.143	ENSRBIG00000043575	CHD7	72	77.752	Rhinopithecus_bieti
ENSPLAG00000023322	chd7	50	62.983	ENSRBIG00000039239	CHD8	64	64.155	Rhinopithecus_bieti
ENSPLAG00000023322	chd7	68	79.346	ENSRROG00000008981	CHD7	72	78.650	Rhinopithecus_roxellana
ENSPLAG00000023322	chd7	50	66.742	ENSRROG00000044285	CHD8	65	69.151	Rhinopithecus_roxellana
ENSPLAG00000023322	chd7	50	66.742	ENSSBOG00000023442	CHD8	59	69.151	Saimiri_boliviensis_boliviensis
ENSPLAG00000023322	chd7	69	79.513	ENSSHAG00000011522	CHD7	71	79.419	Sarcophilus_harrisii
ENSPLAG00000023322	chd7	88	76.587	ENSSFOG00015015077	chd7	71	83.333	Scleropages_formosus
ENSPLAG00000023322	chd7	50	59.454	ENSSDUG00000012439	chd8	60	64.415	Seriola_dumerili
ENSPLAG00000023322	chd7	98	81.959	ENSSDUG00000013773	chd7	100	81.170	Seriola_dumerili
ENSPLAG00000023322	chd7	53	79.826	ENSSARG00000003387	CHD7	65	82.653	Sorex_araneus
ENSPLAG00000023322	chd7	78	78.039	ENSSPUG00000009235	CHD7	74	77.943	Sphenodon_punctatus
ENSPLAG00000023322	chd7	76	86.688	ENSSPAG00000006320	chd7	99	85.632	Stegastes_partitus
ENSPLAG00000023322	chd7	68	79.520	ENSSSCG00000006231	CHD7	51	79.042	Sus_scrofa
ENSPLAG00000023322	chd7	67	80.935	ENSTRUG00000008632	chd7	100	79.726	Takifugu_rubripes
ENSPLAG00000023322	chd7	68	93.333	ENSTNIG00000002647	chd7	99	90.580	Tetraodon_nigroviridis
ENSPLAG00000023322	chd7	65	86.731	ENSTBEG00000001540	CHD7	57	78.149	Tupaia_belangeri
ENSPLAG00000023322	chd7	65	77.697	ENSTTRG00000004221	CHD7	68	77.107	Tursiops_truncatus
ENSPLAG00000023322	chd7	68	76.446	ENSUAMG00000025734	CHD7	77	75.845	Ursus_americanus
ENSPLAG00000023322	chd7	50	66.592	ENSUMAG00000004045	CHD8	71	72.622	Ursus_maritimus
ENSPLAG00000023322	chd7	74	75.600	ENSUMAG00000010436	CHD7	88	77.778	Ursus_maritimus
ENSPLAG00000023322	chd7	51	58.865	ENSVVUG00000018063	CHD7	71	78.712	Vulpes_vulpes
ENSPLAG00000023322	chd7	93	62.754	ENSXETG00000026004	chd8	72	78.873	Xenopus_tropicalis
ENSPLAG00000023322	chd7	100	96.724	ENSXMAG00000018590	chd7	100	96.724	Xiphophorus_maculatus