EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 15758 bases
Position: chrKQ546938.1:40336-56093
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000031377	FAM83	PF07894.12	1.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031934	-	1419	-	ENSPLAP00000031377	472 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000023353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023353	-	56	33.673	ENSPLAG00000002530	-	57	33.673
ENSPLAG00000023353	-	52	34.831	ENSPLAG00000010997	fam83fa	50	34.831
ENSPLAG00000023353	-	54	34.035	ENSPLAG00000019577	fam83d	54	34.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023353	-	74	58.537	ENSAPEG00000010819	-	80	58.537	Amphiprion_percula
ENSPLAG00000023353	-	54	63.077	ENSATEG00000021763	-	74	63.077	Anabas_testudineus
ENSPLAG00000023353	-	88	36.534	ENSAMXG00000035047	fam83b	51	36.534	Astyanax_mexicanus
ENSPLAG00000023353	-	60	34.951	ENSEBUG00000000653	-	57	34.951	Eptatretus_burgeri
ENSPLAG00000023353	-	54	46.520	ENSGMOG00000005524	fam83b	92	46.617	Gadus_morhua
ENSPLAG00000023353	-	57	56.944	ENSGMOG00000007616	-	99	56.944	Gadus_morhua
ENSPLAG00000023353	-	86	53.333	ENSKMAG00000012648	-	53	53.333	Kryptolebias_marmoratus
ENSPLAG00000023353	-	92	53.474	ENSMZEG00005025928	-	50	53.474	Maylandia_zebra
ENSPLAG00000023353	-	84	35.714	ENSMALG00000000850	fam83b	53	36.364	Monopterus_albus
ENSPLAG00000023353	-	87	54.977	ENSNBRG00000004865	-	94	54.324	Neolamprologus_brichardi
ENSPLAG00000023353	-	81	54.726	ENSORLG00015021055	-	70	54.726	Oryzias_latipes_hsok
ENSPLAG00000023353	-	59	59.932	ENSOMEG00000010956	-	79	59.932	Oryzias_melastigma
ENSPLAG00000023353	-	72	85.630	ENSPREG00000021538	-	80	85.630	Poecilia_reticulata
ENSPLAG00000023353	-	89	52.851	ENSTRUG00000022496	-	51	52.119	Takifugu_rubripes
ENSPLAG00000023353	-	54	60.448	ENSTNIG00000003270	-	97	60.448	Tetraodon_nigroviridis