EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023379 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2496 bases
Position: chrKQ548513.1:31146-33641
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000018676	RVT_1	PF00078.27	2.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031951	-	2433	-	ENSPLAP00000018676	810 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000023379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023379	-	99	84.812	ENSPLAG00000022994	-	78	84.812
ENSPLAG00000023379	-	97	84.938	ENSPLAG00000011810	-	76	84.938
ENSPLAG00000023379	-	100	70.000	ENSPLAG00000011817	-	83	70.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023379	-	98	38.943	ENSACIG00000010787	-	75	38.943	Amphilophus_citrinellus
ENSPLAG00000023379	-	98	42.410	ENSACIG00000013116	-	81	42.410	Amphilophus_citrinellus
ENSPLAG00000023379	-	97	42.577	ENSACIG00000009025	-	91	42.577	Amphilophus_citrinellus
ENSPLAG00000023379	-	96	39.800	ENSACIG00000012161	-	71	39.800	Amphilophus_citrinellus
ENSPLAG00000023379	-	97	42.577	ENSACIG00000007038	-	71	42.577	Amphilophus_citrinellus
ENSPLAG00000023379	-	97	39.039	ENSAMXG00000042811	-	69	39.039	Astyanax_mexicanus
ENSPLAG00000023379	-	97	37.695	ENSCPBG00000003842	-	63	37.695	Chrysemys_picta_bellii
ENSPLAG00000023379	-	96	41.708	ENSCVAG00000004138	-	77	41.708	Cyprinodon_variegatus
ENSPLAG00000023379	-	98	38.462	ENSELUG00000004597	-	84	39.103	Esox_lucius
ENSPLAG00000023379	-	79	36.616	ENSELUG00000004618	-	63	36.616	Esox_lucius
ENSPLAG00000023379	-	98	39.659	ENSFHEG00000002865	-	71	39.659	Fundulus_heteroclitus
ENSPLAG00000023379	-	85	44.274	ENSFHEG00000007211	-	75	41.636	Fundulus_heteroclitus
ENSPLAG00000023379	-	99	41.787	ENSFHEG00000022106	-	76	41.787	Fundulus_heteroclitus
ENSPLAG00000023379	-	99	43.154	ENSFHEG00000002853	-	77	43.154	Fundulus_heteroclitus
ENSPLAG00000023379	-	70	40.273	ENSGMOG00000005227	-	99	40.273	Gadus_morhua
ENSPLAG00000023379	-	58	32.164	ENSGACG00000000426	-	98	32.164	Gasterosteus_aculeatus
ENSPLAG00000023379	-	58	34.971	ENSGACG00000015045	-	100	34.971	Gasterosteus_aculeatus
ENSPLAG00000023379	-	98	37.679	ENSHCOG00000007397	-	72	37.679	Hippocampus_comes
ENSPLAG00000023379	-	99	36.396	ENSHCOG00000007389	-	78	36.396	Hippocampus_comes
ENSPLAG00000023379	-	96	37.189	ENSHCOG00000000471	-	68	37.189	Hippocampus_comes
ENSPLAG00000023379	-	83	46.479	ENSHCOG00000007436	-	64	46.479	Hippocampus_comes
ENSPLAG00000023379	-	96	38.272	ENSLBEG00000003745	-	93	38.171	Labrus_bergylta
ENSPLAG00000023379	-	88	38.841	ENSLBEG00000006732	-	86	38.841	Labrus_bergylta
ENSPLAG00000023379	-	88	39.485	ENSLBEG00000004576	-	86	39.485	Labrus_bergylta
ENSPLAG00000023379	-	91	34.127	ENSLACG00000006357	-	95	34.127	Latimeria_chalumnae
ENSPLAG00000023379	-	69	34.729	ENSLACG00000009240	-	100	34.729	Latimeria_chalumnae
ENSPLAG00000023379	-	97	35.383	ENSLOCG00000011928	-	73	35.383	Lepisosteus_oculatus
ENSPLAG00000023379	-	63	39.734	ENSLOCG00000002743	-	99	39.734	Lepisosteus_oculatus
ENSPLAG00000023379	-	97	37.136	ENSLOCG00000017064	-	74	37.136	Lepisosteus_oculatus
ENSPLAG00000023379	-	97	43.834	ENSMAMG00000019985	-	69	43.834	Mastacembelus_armatus
ENSPLAG00000023379	-	99	43.608	ENSONIG00000020875	-	73	43.608	Oreochromis_niloticus
ENSPLAG00000023379	-	97	41.045	ENSOMEG00000015368	-	76	41.045	Oryzias_melastigma
ENSPLAG00000023379	-	73	41.625	ENSPMGG00000001593	-	63	41.625	Periophthalmus_magnuspinnatus
ENSPLAG00000023379	-	97	40.621	ENSPMGG00000017392	-	86	40.621	Periophthalmus_magnuspinnatus
ENSPLAG00000023379	-	100	85.337	ENSPMEG00000008574	-	77	85.337	Poecilia_mexicana
ENSPLAG00000023379	-	100	70.999	ENSPMEG00000003431	-	80	70.999	Poecilia_mexicana
ENSPLAG00000023379	-	99	51.087	ENSPREG00000005756	-	75	51.087	Poecilia_reticulata
ENSPLAG00000023379	-	99	72.859	ENSPREG00000012484	-	74	72.859	Poecilia_reticulata
ENSPLAG00000023379	-	99	50.604	ENSPREG00000005456	-	71	50.604	Poecilia_reticulata
ENSPLAG00000023379	-	99	39.882	ENSPNAG00000003539	-	69	39.882	Pygocentrus_nattereri
ENSPLAG00000023379	-	99	39.146	ENSPNAG00000016635	-	70	39.146	Pygocentrus_nattereri
ENSPLAG00000023379	-	77	40.769	ENSPNAG00000017596	-	67	40.769	Pygocentrus_nattereri
ENSPLAG00000023379	-	96	39.711	ENSPNAG00000021754	-	70	39.711	Pygocentrus_nattereri
ENSPLAG00000023379	-	97	40.633	ENSPNAG00000007038	-	70	40.980	Pygocentrus_nattereri
ENSPLAG00000023379	-	92	35.678	ENSPNAG00000014625	-	69	35.506	Pygocentrus_nattereri
ENSPLAG00000023379	-	99	72.651	ENSXCOG00000008881	-	94	72.651	Xiphophorus_couchianus
ENSPLAG00000023379	-	97	40.594	ENSXCOG00000013093	-	71	40.594	Xiphophorus_couchianus
ENSPLAG00000023379	-	99	69.518	ENSXMAG00000028672	-	76	69.518	Xiphophorus_maculatus