EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023416 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 16072 bases
Position: chrKQ549288.1:12456-28527
Accession: 106942200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000018686	ResIII	PF04851.15	5.2e-08	1	1
ENSPLAP00000018686	DEAD	PF00270.29	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028242	-	1809	XM_015025422	ENSPLAP00000018686	603 (aa)	XP_014880908	-

Gene Model

Click here to download ENSPLAG00000023416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023416	rad54l	94	44.143	ENSPLAG00000010430	rad54b	61	44.652
ENSPLAG00000023416	rad54l	82	30.556	ENSPLAG00000015145	chd1l	51	30.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023416	rad54l	99	80.357	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSPLAG00000023416	rad54l	99	83.442	ENSAPOG00000011643	rad54l	82	83.442	Acanthochromis_polyacanthus
ENSPLAG00000023416	rad54l	99	79.708	ENSAMEG00000013902	RAD54L	81	79.708	Ailuropoda_melanoleuca
ENSPLAG00000023416	rad54l	99	84.578	ENSACIG00000001939	rad54l	82	84.578	Amphilophus_citrinellus
ENSPLAG00000023416	rad54l	99	87.338	ENSAOCG00000017576	rad54l	82	87.338	Amphiprion_ocellaris
ENSPLAG00000023416	rad54l	99	87.175	ENSAPEG00000020658	rad54l	84	87.175	Amphiprion_percula
ENSPLAG00000023416	rad54l	99	88.312	ENSATEG00000006767	rad54l	87	88.312	Anabas_testudineus
ENSPLAG00000023416	rad54l	99	79.545	ENSAPLG00000006389	RAD54L	87	80.844	Anas_platyrhynchos
ENSPLAG00000023416	rad54l	99	82.468	ENSACAG00000002312	RAD54L	82	82.468	Anolis_carolinensis
ENSPLAG00000023416	rad54l	99	80.032	ENSANAG00000035439	RAD54L	81	80.032	Aotus_nancymaae
ENSPLAG00000023416	rad54l	99	84.903	ENSACLG00000018711	rad54l	86	83.173	Astatotilapia_calliptera
ENSPLAG00000023416	rad54l	99	83.766	ENSAMXG00000012777	rad54l	82	85.065	Astyanax_mexicanus
ENSPLAG00000023416	rad54l	99	80.682	ENSBTAG00000019901	RAD54L	81	80.682	Bos_taurus
ENSPLAG00000023416	rad54l	99	58.766	WBGene00004298	rad-54	74	58.766	Caenorhabditis_elegans
ENSPLAG00000023416	rad54l	99	80.357	ENSCJAG00000021080	RAD54L	77	80.357	Callithrix_jacchus
ENSPLAG00000023416	rad54l	99	79.870	ENSCAFG00000004272	RAD54L	81	79.870	Canis_familiaris
ENSPLAG00000023416	rad54l	99	79.870	ENSCAFG00020015066	RAD54L	81	79.870	Canis_lupus_dingo
ENSPLAG00000023416	rad54l	99	80.682	ENSCHIG00000020118	RAD54L	81	80.682	Capra_hircus
ENSPLAG00000023416	rad54l	99	79.870	ENSTSYG00000002032	RAD54L	81	79.870	Carlito_syrichta
ENSPLAG00000023416	rad54l	99	80.357	ENSCPOG00000006768	RAD54L	81	80.357	Cavia_porcellus
ENSPLAG00000023416	rad54l	99	80.519	ENSCCAG00000025783	RAD54L	81	80.519	Cebus_capucinus
ENSPLAG00000023416	rad54l	99	80.195	ENSCATG00000030589	RAD54L	81	80.195	Cercocebus_atys
ENSPLAG00000023416	rad54l	99	80.195	ENSCLAG00000004645	RAD54L	81	80.195	Chinchilla_lanigera
ENSPLAG00000023416	rad54l	99	80.195	ENSCSAG00000001229	RAD54L	81	80.195	Chlorocebus_sabaeus
ENSPLAG00000023416	rad54l	99	81.169	ENSCPBG00000005675	RAD54L	82	81.169	Chrysemys_picta_bellii
ENSPLAG00000023416	rad54l	99	66.348	ENSCING00000024456	-	81	66.348	Ciona_intestinalis
ENSPLAG00000023416	rad54l	99	66.613	ENSCSAVG00000010859	-	80	66.613	Ciona_savignyi
ENSPLAG00000023416	rad54l	99	80.195	ENSCANG00000034891	RAD54L	81	80.195	Colobus_angolensis_palliatus
ENSPLAG00000023416	rad54l	99	78.896	ENSCGRG00001014807	Rad54l	82	78.896	Cricetulus_griseus_chok1gshd
ENSPLAG00000023416	rad54l	99	78.896	ENSCGRG00000016038	Rad54l	82	78.896	Cricetulus_griseus_crigri
ENSPLAG00000023416	rad54l	99	87.825	ENSCSEG00000001983	rad54l	84	87.825	Cynoglossus_semilaevis
ENSPLAG00000023416	rad54l	82	89.130	ENSCVAG00000019561	rad54l	88	89.130	Cyprinodon_variegatus
ENSPLAG00000023416	rad54l	99	83.442	ENSDARG00000018623	rad54l	82	83.442	Danio_rerio
ENSPLAG00000023416	rad54l	99	79.545	ENSDNOG00000003395	RAD54L	81	79.545	Dasypus_novemcinctus
ENSPLAG00000023416	rad54l	99	73.355	ENSDORG00000002632	Rad54l	81	73.515	Dipodomys_ordii
ENSPLAG00000023416	rad54l	99	55.447	FBgn0002989	okr	77	55.447	Drosophila_melanogaster
ENSPLAG00000023416	rad54l	74	79.630	ENSETEG00000000550	RAD54L	59	79.630	Echinops_telfairi
ENSPLAG00000023416	rad54l	99	80.725	ENSEASG00005004511	RAD54L	86	80.725	Equus_asinus_asinus
ENSPLAG00000023416	rad54l	99	80.488	ENSECAG00000008760	RAD54L	86	80.488	Equus_caballus
ENSPLAG00000023416	rad54l	99	80.488	ENSEEUG00000008113	RAD54L	81	80.488	Erinaceus_europaeus
ENSPLAG00000023416	rad54l	99	85.900	ENSELUG00000002295	rad54l	82	85.900	Esox_lucius
ENSPLAG00000023416	rad54l	99	79.545	ENSFCAG00000003444	RAD54L	81	79.545	Felis_catus
ENSPLAG00000023416	rad54l	99	81.169	ENSFALG00000009480	RAD54L	82	81.169	Ficedula_albicollis
ENSPLAG00000023416	rad54l	99	80.032	ENSFDAG00000007806	RAD54L	81	80.032	Fukomys_damarensis
ENSPLAG00000023416	rad54l	72	87.671	ENSFHEG00000009824	rad54l	74	87.671	Fundulus_heteroclitus
ENSPLAG00000023416	rad54l	99	83.766	ENSGMOG00000014568	rad54l	83	83.766	Gadus_morhua
ENSPLAG00000023416	rad54l	99	79.870	ENSGALG00000010356	RAD54L	76	81.169	Gallus_gallus
ENSPLAG00000023416	rad54l	99	94.805	ENSGAFG00000011110	rad54l	90	94.805	Gambusia_affinis
ENSPLAG00000023416	rad54l	99	87.175	ENSGACG00000003111	rad54l	80	87.175	Gasterosteus_aculeatus
ENSPLAG00000023416	rad54l	99	80.357	ENSGAGG00000014089	RAD54L	79	80.357	Gopherus_agassizii
ENSPLAG00000023416	rad54l	99	79.870	ENSGGOG00000010602	RAD54L	81	79.870	Gorilla_gorilla
ENSPLAG00000023416	rad54l	99	85.065	ENSHBUG00000007793	rad54l	86	83.333	Haplochromis_burtoni
ENSPLAG00000023416	rad54l	99	80.032	ENSHGLG00000000753	RAD54L	81	80.032	Heterocephalus_glaber_female
ENSPLAG00000023416	rad54l	99	80.032	ENSHGLG00100016987	RAD54L	81	80.032	Heterocephalus_glaber_male
ENSPLAG00000023416	rad54l	99	83.766	ENSIPUG00000015999	rad54l	87	83.766	Ictalurus_punctatus
ENSPLAG00000023416	rad54l	99	79.708	ENSSTOG00000029125	RAD54L	81	79.708	Ictidomys_tridecemlineatus
ENSPLAG00000023416	rad54l	96	67.513	ENSJJAG00000000235	-	77	67.513	Jaculus_jaculus
ENSPLAG00000023416	rad54l	99	86.039	ENSKMAG00000009944	rad54l	82	86.039	Kryptolebias_marmoratus
ENSPLAG00000023416	rad54l	100	87.034	ENSLBEG00000014617	rad54l	88	87.034	Labrus_bergylta
ENSPLAG00000023416	rad54l	99	84.992	ENSLOCG00000004144	rad54l	90	84.992	Lepisosteus_oculatus
ENSPLAG00000023416	rad54l	99	80.682	ENSLAFG00000007583	RAD54L	82	80.682	Loxodonta_africana
ENSPLAG00000023416	rad54l	99	80.195	ENSMFAG00000031241	RAD54L	81	80.195	Macaca_fascicularis
ENSPLAG00000023416	rad54l	99	80.195	ENSMMUG00000011568	RAD54L	81	80.195	Macaca_mulatta
ENSPLAG00000023416	rad54l	99	80.032	ENSMNEG00000038562	RAD54L	81	80.032	Macaca_nemestrina
ENSPLAG00000023416	rad54l	99	80.195	ENSMLEG00000038145	RAD54L	81	80.195	Mandrillus_leucophaeus
ENSPLAG00000023416	rad54l	100	85.413	ENSMAMG00000022180	rad54l	90	85.227	Mastacembelus_armatus
ENSPLAG00000023416	rad54l	99	84.903	ENSMZEG00005018081	rad54l	86	83.173	Maylandia_zebra
ENSPLAG00000023416	rad54l	99	79.870	ENSMGAG00000010634	RAD54L	82	81.169	Meleagris_gallopavo
ENSPLAG00000023416	rad54l	99	79.708	ENSMAUG00000020076	Rad54l	82	79.708	Mesocricetus_auratus
ENSPLAG00000023416	rad54l	99	80.519	ENSMICG00000003266	RAD54L	81	80.519	Microcebus_murinus
ENSPLAG00000023416	rad54l	99	80.032	ENSMOCG00000001778	Rad54l	82	80.032	Microtus_ochrogaster
ENSPLAG00000023416	rad54l	99	82.764	ENSMALG00000021148	rad54l	81	82.764	Monopterus_albus
ENSPLAG00000023416	rad54l	96	79.595	MGP_CAROLIEiJ_G0026325	Rad54l	77	79.595	Mus_caroli
ENSPLAG00000023416	rad54l	99	79.221	ENSMUSG00000028702	Rad54l	81	79.221	Mus_musculus
ENSPLAG00000023416	rad54l	99	79.221	MGP_PahariEiJ_G0028657	Rad54l	82	79.221	Mus_pahari
ENSPLAG00000023416	rad54l	99	79.383	MGP_SPRETEiJ_G0027297	Rad54l	81	79.383	Mus_spretus
ENSPLAG00000023416	rad54l	99	79.903	ENSMPUG00000012883	RAD54L	81	79.903	Mustela_putorius_furo
ENSPLAG00000023416	rad54l	99	80.682	ENSMLUG00000003763	RAD54L	81	80.682	Myotis_lucifugus
ENSPLAG00000023416	rad54l	99	79.545	ENSNGAG00000024213	Rad54l	82	79.545	Nannospalax_galili
ENSPLAG00000023416	rad54l	99	79.708	ENSNLEG00000016548	RAD54L	81	79.708	Nomascus_leucogenys
ENSPLAG00000023416	rad54l	99	75.733	ENSMEUG00000006793	RAD54L	90	75.733	Notamacropus_eugenii
ENSPLAG00000023416	rad54l	87	84.018	ENSOPRG00000016016	RAD54L	73	84.018	Ochotona_princeps
ENSPLAG00000023416	rad54l	99	80.844	ENSODEG00000008519	RAD54L	81	80.844	Octodon_degus
ENSPLAG00000023416	rad54l	99	85.227	ENSONIG00000007659	rad54l	82	85.227	Oreochromis_niloticus
ENSPLAG00000023416	rad54l	99	80.032	ENSOCUG00000005229	RAD54L	81	80.032	Oryctolagus_cuniculus
ENSPLAG00000023416	rad54l	99	84.416	ENSORLG00000002958	rad54l	83	84.416	Oryzias_latipes
ENSPLAG00000023416	rad54l	99	84.578	ENSORLG00020006554	rad54l	89	84.578	Oryzias_latipes_hni
ENSPLAG00000023416	rad54l	99	84.578	ENSORLG00015002907	rad54l	83	84.578	Oryzias_latipes_hsok
ENSPLAG00000023416	rad54l	99	84.416	ENSOMEG00000007770	rad54l	83	84.416	Oryzias_melastigma
ENSPLAG00000023416	rad54l	99	80.551	ENSOARG00000002264	RAD54L	81	80.551	Ovis_aries
ENSPLAG00000023416	rad54l	99	80.195	ENSPPAG00000031222	RAD54L	81	80.195	Pan_paniscus
ENSPLAG00000023416	rad54l	99	79.545	ENSPPRG00000010317	RAD54L	81	79.545	Panthera_pardus
ENSPLAG00000023416	rad54l	99	79.545	ENSPTIG00000012200	RAD54L	81	79.545	Panthera_tigris_altaica
ENSPLAG00000023416	rad54l	99	80.032	ENSPTRG00000000689	RAD54L	81	80.032	Pan_troglodytes
ENSPLAG00000023416	rad54l	99	80.195	ENSPANG00000016295	RAD54L	86	80.195	Papio_anubis
ENSPLAG00000023416	rad54l	99	78.990	ENSPKIG00000016172	rad54l	82	78.990	Paramormyrops_kingsleyae
ENSPLAG00000023416	rad54l	99	80.519	ENSPSIG00000003258	RAD54L	83	81.818	Pelodiscus_sinensis
ENSPLAG00000023416	rad54l	99	80.195	ENSPMGG00000016335	rad54l	83	80.195	Periophthalmus_magnuspinnatus
ENSPLAG00000023416	rad54l	99	79.383	ENSPEMG00000011422	Rad54l	82	79.383	Peromyscus_maniculatus_bairdii
ENSPLAG00000023416	rad54l	91	76.106	ENSPMAG00000007719	rad54l	75	76.106	Petromyzon_marinus
ENSPLAG00000023416	rad54l	99	79.870	ENSPCIG00000029032	RAD54L	82	79.870	Phascolarctos_cinereus
ENSPLAG00000023416	rad54l	99	96.104	ENSPFOG00000013732	rad54l	96	96.104	Poecilia_formosa
ENSPLAG00000023416	rad54l	99	96.104	ENSPMEG00000008299	rad54l	90	96.104	Poecilia_mexicana
ENSPLAG00000023416	rad54l	99	95.455	ENSPREG00000019955	rad54l	82	95.455	Poecilia_reticulata
ENSPLAG00000023416	rad54l	94	77.148	ENSPPYG00000001398	RAD54L	80	77.148	Pongo_abelii
ENSPLAG00000023416	rad54l	76	87.234	ENSPCAG00000005323	RAD54L	62	87.234	Procavia_capensis
ENSPLAG00000023416	rad54l	99	79.870	ENSPCOG00000015423	RAD54L	81	79.870	Propithecus_coquereli
ENSPLAG00000023416	rad54l	99	83.173	ENSPNYG00000002942	rad54l	86	83.173	Pundamilia_nyererei
ENSPLAG00000023416	rad54l	99	84.903	ENSPNAG00000012483	rad54l	82	84.903	Pygocentrus_nattereri
ENSPLAG00000023416	rad54l	99	79.058	ENSRNOG00000013148	Rad54l	81	79.058	Rattus_norvegicus
ENSPLAG00000023416	rad54l	99	80.195	ENSRBIG00000043495	RAD54L	81	80.195	Rhinopithecus_bieti
ENSPLAG00000023416	rad54l	99	80.195	ENSRROG00000020844	RAD54L	81	80.195	Rhinopithecus_roxellana
ENSPLAG00000023416	rad54l	88	49.915	YGL163C	RAD54	64	50.085	Saccharomyces_cerevisiae
ENSPLAG00000023416	rad54l	99	80.357	ENSSBOG00000024672	RAD54L	81	80.357	Saimiri_boliviensis_boliviensis
ENSPLAG00000023416	rad54l	99	79.612	ENSSHAG00000000110	RAD54L	82	79.612	Sarcophilus_harrisii
ENSPLAG00000023416	rad54l	99	87.175	ENSSDUG00000019147	rad54l	82	87.175	Seriola_dumerili
ENSPLAG00000023416	rad54l	99	86.992	ENSSLDG00000012330	rad54l	86	86.992	Seriola_lalandi_dorsalis
ENSPLAG00000023416	rad54l	91	80.392	ENSSARG00000006689	RAD54L	89	80.392	Sorex_araneus
ENSPLAG00000023416	rad54l	99	86.364	ENSSPAG00000011016	rad54l	82	86.364	Stegastes_partitus
ENSPLAG00000023416	rad54l	99	80.519	ENSSSCG00000003905	RAD54L	81	80.519	Sus_scrofa
ENSPLAG00000023416	rad54l	99	81.331	ENSTGUG00000008233	RAD54L	82	81.331	Taeniopygia_guttata
ENSPLAG00000023416	rad54l	100	83.657	ENSTRUG00000008410	rad54l	86	83.657	Takifugu_rubripes
ENSPLAG00000023416	rad54l	99	80.682	ENSTNIG00000004716	rad54l	83	80.682	Tetraodon_nigroviridis
ENSPLAG00000023416	rad54l	99	77.236	ENSTTRG00000006315	RAD54L	81	77.236	Tursiops_truncatus
ENSPLAG00000023416	rad54l	99	79.545	ENSUAMG00000011824	RAD54L	82	79.545	Ursus_americanus
ENSPLAG00000023416	rad54l	99	78.084	ENSUMAG00000023603	RAD54L	82	78.084	Ursus_maritimus
ENSPLAG00000023416	rad54l	99	79.870	ENSVVUG00000007201	RAD54L	81	79.870	Vulpes_vulpes
ENSPLAG00000023416	rad54l	99	74.879	ENSXETG00000004369	rad54l	85	74.879	Xenopus_tropicalis
ENSPLAG00000023416	rad54l	58	94.901	ENSXCOG00000016028	rad54l	82	86.717	Xiphophorus_couchianus