EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023459 (Gene tree)
Gene ID: 106961351
Gene Symbol: setd1ba
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 16206 bases
Position: chrKQ546606.1:124816-141021
Accession: 106961351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000018753	RRM_1	PF00076.22	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028318	-	7216	XM_015055034	ENSPLAP00000018753	1803 (aa)	XP_014910520	-

Gene Model

Click here to download ENSPLAG00000023459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023459	setd1ba	53	65.714	ENSPLAG00000009294	setd1a	57	65.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023459	setd1ba	50	83.228	ENSG00000139718	SETD1B	91	52.304	Homo_sapiens
ENSPLAG00000023459	setd1ba	100	72.802	ENSACIG00000016453	setd1ba	56	80.674	Amphilophus_citrinellus
ENSPLAG00000023459	setd1ba	97	77.616	ENSAOCG00000012148	setd1ba	99	77.280	Amphiprion_ocellaris
ENSPLAG00000023459	setd1ba	100	76.362	ENSAPEG00000010762	setd1ba	55	79.545	Amphiprion_percula
ENSPLAG00000023459	setd1ba	90	81.374	ENSATEG00000021563	setd1ba	98	81.957	Anabas_testudineus
ENSPLAG00000023459	setd1ba	96	56.509	ENSAPLG00000005217	SETD1B	86	56.413	Anas_platyrhynchos
ENSPLAG00000023459	setd1ba	50	82.278	ENSCJAG00000016930	SETD1B	87	56.487	Callithrix_jacchus
ENSPLAG00000023459	setd1ba	61	69.733	ENSCAFG00020016619	SETD1B	82	51.254	Canis_lupus_dingo
ENSPLAG00000023459	setd1ba	50	72.036	ENSCHIG00000013406	SETD1B	87	51.108	Capra_hircus
ENSPLAG00000023459	setd1ba	73	82.595	ENSCATG00000035803	SETD1B	87	56.825	Cercocebus_atys
ENSPLAG00000023459	setd1ba	66	69.112	ENSCANG00000023445	SETD1B	76	66.545	Colobus_angolensis_palliatus
ENSPLAG00000023459	setd1ba	100	79.792	ENSCVAG00000022068	setd1ba	99	81.267	Cyprinodon_variegatus
ENSPLAG00000023459	setd1ba	55	64.335	ENSDARG00000060847	setd1ba	53	63.933	Danio_rerio
ENSPLAG00000023459	setd1ba	50	80.793	ENSFCAG00000013185	SETD1B	92	52.109	Felis_catus
ENSPLAG00000023459	setd1ba	100	83.170	ENSFHEG00000013126	setd1ba	100	83.061	Fundulus_heteroclitus
ENSPLAG00000023459	setd1ba	53	89.206	ENSGMOG00000009831	setd1ba	59	89.206	Gadus_morhua
ENSPLAG00000023459	setd1ba	94	94.137	ENSGAFG00000008712	setd1ba	95	94.137	Gambusia_affinis
ENSPLAG00000023459	setd1ba	53	77.054	ENSGACG00000017002	setd1ba	56	77.054	Gasterosteus_aculeatus
ENSPLAG00000023459	setd1ba	55	41.935	ENSIPUG00000003992	-	59	48.062	Ictalurus_punctatus
ENSPLAG00000023459	setd1ba	55	78.854	ENSKMAG00000007804	setd1ba	54	78.557	Kryptolebias_marmoratus
ENSPLAG00000023459	setd1ba	100	71.933	ENSLBEG00000020113	setd1ba	54	75.330	Labrus_bergylta
ENSPLAG00000023459	setd1ba	62	57.496	ENSMFAG00000030930	SETD1B	86	58.814	Macaca_fascicularis
ENSPLAG00000023459	setd1ba	51	49.805	ENSMNEG00000014228	SETD1B	51	51.680	Macaca_nemestrina
ENSPLAG00000023459	setd1ba	50	82.911	ENSMICG00000001152	SETD1B	86	57.030	Microcebus_murinus
ENSPLAG00000023459	setd1ba	53	79.697	ENSMMOG00000008190	setd1ba	55	79.409	Mola_mola
ENSPLAG00000023459	setd1ba	100	77.530	ENSNBRG00000002915	setd1ba	54	83.096	Neolamprologus_brichardi
ENSPLAG00000023459	setd1ba	64	82.595	ENSNLEG00000001254	SETD1B	75	81.115	Nomascus_leucogenys
ENSPLAG00000023459	setd1ba	50	79.091	ENSODEG00000010155	SETD1B	83	53.343	Octodon_degus
ENSPLAG00000023459	setd1ba	100	77.537	ENSONIG00000013898	setd1ba	55	81.262	Oreochromis_niloticus
ENSPLAG00000023459	setd1ba	100	71.336	ENSORLG00000008435	setd1ba	55	75.794	Oryzias_latipes
ENSPLAG00000023459	setd1ba	66	71.405	ENSORLG00015004156	setd1ba	81	77.044	Oryzias_latipes_hsok
ENSPLAG00000023459	setd1ba	100	72.271	ENSOMEG00000002270	setd1ba	100	72.510	Oryzias_melastigma
ENSPLAG00000023459	setd1ba	50	82.965	ENSOGAG00000034809	SETD1B	83	56.672	Otolemur_garnettii
ENSPLAG00000023459	setd1ba	50	82.595	ENSPPAG00000043308	SETD1B	91	52.690	Pan_paniscus
ENSPLAG00000023459	setd1ba	70	80.793	ENSPPRG00000021041	SETD1B	86	51.497	Panthera_pardus
ENSPLAG00000023459	setd1ba	50	83.228	ENSPTRG00000005567	SETD1B	91	52.304	Pan_troglodytes
ENSPLAG00000023459	setd1ba	50	83.228	ENSPANG00000014784	SETD1B	83	57.143	Papio_anubis
ENSPLAG00000023459	setd1ba	85	77.592	ENSPMGG00000011527	setd1ba	89	77.592	Periophthalmus_magnuspinnatus
ENSPLAG00000023459	setd1ba	64	80.635	ENSPCIG00000028605	SETD1B	87	57.480	Phascolarctos_cinereus
ENSPLAG00000023459	setd1ba	100	98.626	ENSPFOG00000019768	setd1ba	100	98.626	Poecilia_formosa
ENSPLAG00000023459	setd1ba	100	98.186	ENSPMEG00000020446	setd1ba	100	98.186	Poecilia_mexicana
ENSPLAG00000023459	setd1ba	100	97.141	ENSPREG00000011589	setd1ba	100	97.141	Poecilia_reticulata
ENSPLAG00000023459	setd1ba	100	77.476	ENSPNYG00000009484	setd1ba	54	82.892	Pundamilia_nyererei
ENSPLAG00000023459	setd1ba	76	57.428	ENSPNAG00000016011	setd1ba	57	64.107	Pygocentrus_nattereri
ENSPLAG00000023459	setd1ba	52	75.316	ENSRNOG00000001337	Setd1b	88	48.961	Rattus_norvegicus
ENSPLAG00000023459	setd1ba	60	82.595	ENSSBOG00000033322	SETD1B	84	58.333	Saimiri_boliviensis_boliviensis
ENSPLAG00000023459	setd1ba	96	59.763	ENSSFOG00015015331	setd1ba	93	59.353	Scleropages_formosus
ENSPLAG00000023459	setd1ba	66	80.488	ENSSSCG00000009806	SETD1B	90	60.000	Sus_scrofa
ENSPLAG00000023459	setd1ba	66	80.183	ENSUAMG00000008729	SETD1B	79	56.735	Ursus_americanus
ENSPLAG00000023459	setd1ba	96	55.455	ENSXETG00000003760	setd1b	85	57.528	Xenopus_tropicalis
ENSPLAG00000023459	setd1ba	100	89.295	ENSXCOG00000004451	setd1ba	99	88.859	Xiphophorus_couchianus
ENSPLAG00000023459	setd1ba	99	95.230	ENSXMAG00000014097	setd1ba	100	95.225	Xiphophorus_maculatus