EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023590 (Gene tree)
Gene ID: 106948676
Gene Symbol: -
Alias: -
Full Name: 40S ribosomal protein S27-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2814 bases
Position: chrKQ545616.1:5062-7875
Accession: 106948676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000031530	Ribosomal_S27e	PF01667.17	7.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028447	-	2222	XM_015034493	ENSPLAP00000031530	84 (aa)	XP_014889979	UPI000443FC57

Gene Model

Click here to download ENSPLAG00000023590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023590	-	98	71.951	ENSPLAG00000003173	-	98	71.951
ENSPLAG00000023590	-	98	71.951	ENSPLAG00000005795	-	98	71.951
ENSPLAG00000023590	-	98	71.951	ENSPLAG00000019266	-	98	71.951
ENSPLAG00000023590	-	100	100.000	ENSPLAG00000013332	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023590	-	98	65.854	WBGene00004496	rps-27	99	65.854	Caenorhabditis_elegans
ENSPLAG00000023590	-	98	69.512	FBgn0039300	RpS27	98	69.512	Drosophila_melanogaster
ENSPLAG00000023590	-	90	92.105	ENSFHEG00000004295	-	55	92.105	Fundulus_heteroclitus
ENSPLAG00000023590	-	100	98.810	ENSGAFG00000016054	-	61	98.810	Gambusia_affinis
ENSPLAG00000023590	-	93	80.769	ENSGACG00000011286	-	92	80.769	Gasterosteus_aculeatus
ENSPLAG00000023590	-	95	76.250	ENSMMOG00000020318	-	96	76.250	Mola_mola
ENSPLAG00000023590	-	95	100.000	ENSPFOG00000004190	-	100	100.000	Poecilia_formosa
ENSPLAG00000023590	-	98	93.976	ENSPMEG00000017808	-	90	93.976	Poecilia_mexicana
ENSPLAG00000023590	-	98	59.756	YKL156W	RPS27A	100	59.756	Saccharomyces_cerevisiae
ENSPLAG00000023590	-	98	58.537	YHR021C	RPS27B	100	58.537	Saccharomyces_cerevisiae
ENSPLAG00000023590	-	92	67.532	ENSSLDG00000003982	-	88	67.532	Seriola_lalandi_dorsalis
ENSPLAG00000023590	-	98	97.561	ENSXCOG00000010263	-	99	97.561	Xiphophorus_couchianus
ENSPLAG00000023590	-	90	97.368	ENSXMAG00000003387	-	88	97.368	Xiphophorus_maculatus