EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023871 (Gene tree)
Gene ID: 106950019
Gene Symbol: pde12
Alias: -
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8042 bases
Position: chrKQ545689.1:284419-292460
Accession: 106950019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000031773	Exo_endo_phos	PF03372.23	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028681	-	3558	XM_015036635	ENSPLAP00000031773	535 (aa)	XP_014892121	-

Gene Model

Click here to download ENSPLAG00000023871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023871	pde12	59	30.168	ENSPLAG00000019862	cnot6l	63	30.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023871	pde12	81	61.348	ENSG00000174840	PDE12	72	61.765	Homo_sapiens
ENSPLAG00000023871	pde12	80	84.075	ENSAPOG00000018806	pde12	72	84.075	Acanthochromis_polyacanthus
ENSPLAG00000023871	pde12	80	62.442	ENSAMEG00000011802	PDE12	76	62.442	Ailuropoda_melanoleuca
ENSPLAG00000023871	pde12	80	78.947	ENSACIG00000014918	pde12	73	78.947	Amphilophus_citrinellus
ENSPLAG00000023871	pde12	80	84.309	ENSAOCG00000016376	pde12	73	84.309	Amphiprion_ocellaris
ENSPLAG00000023871	pde12	80	84.309	ENSAPEG00000000756	pde12	73	84.309	Amphiprion_percula
ENSPLAG00000023871	pde12	80	82.670	ENSATEG00000003072	pde12	76	82.670	Anabas_testudineus
ENSPLAG00000023871	pde12	81	57.834	ENSACAG00000003067	PDE12	72	57.834	Anolis_carolinensis
ENSPLAG00000023871	pde12	81	61.625	ENSANAG00000011815	PDE12	72	61.818	Aotus_nancymaae
ENSPLAG00000023871	pde12	80	80.324	ENSACLG00000010127	pde12	73	80.324	Astatotilapia_calliptera
ENSPLAG00000023871	pde12	80	66.219	ENSAMXG00000020765	pde12	74	66.219	Astyanax_mexicanus
ENSPLAG00000023871	pde12	81	62.022	ENSBTAG00000015563	PDE12	72	62.387	Bos_taurus
ENSPLAG00000023871	pde12	81	62.132	ENSCJAG00000019905	PDE12	72	62.132	Callithrix_jacchus
ENSPLAG00000023871	pde12	80	60.998	ENSCAFG00000007792	PDE12	71	61.486	Canis_familiaris
ENSPLAG00000023871	pde12	80	61.224	ENSCAFG00020006692	PDE12	71	61.348	Canis_lupus_dingo
ENSPLAG00000023871	pde12	81	62.022	ENSCHIG00000014202	PDE12	72	62.387	Capra_hircus
ENSPLAG00000023871	pde12	81	61.261	ENSTSYG00000025750	PDE12	72	61.312	Carlito_syrichta
ENSPLAG00000023871	pde12	81	61.124	ENSCPOG00000001620	PDE12	72	61.124	Cavia_porcellus
ENSPLAG00000023871	pde12	81	52.822	ENSCCAG00000031290	PDE12	69	52.822	Cebus_capucinus
ENSPLAG00000023871	pde12	81	61.573	ENSCATG00000044539	PDE12	72	61.991	Cercocebus_atys
ENSPLAG00000023871	pde12	81	59.729	ENSCLAG00000004864	PDE12	72	60.181	Chinchilla_lanigera
ENSPLAG00000023871	pde12	81	61.261	ENSCSAG00000012275	PDE12	72	61.224	Chlorocebus_sabaeus
ENSPLAG00000023871	pde12	69	65.395	ENSCHOG00000002188	-	60	65.217	Choloepus_hoffmanni
ENSPLAG00000023871	pde12	73	64.781	ENSCHOG00000012173	-	96	63.910	Choloepus_hoffmanni
ENSPLAG00000023871	pde12	88	57.950	ENSCPBG00000012353	PDE12	77	57.950	Chrysemys_picta_bellii
ENSPLAG00000023871	pde12	80	38.063	ENSCING00000006903	-	94	38.063	Ciona_intestinalis
ENSPLAG00000023871	pde12	81	61.573	ENSCANG00000038723	PDE12	72	61.991	Colobus_angolensis_palliatus
ENSPLAG00000023871	pde12	80	60.722	ENSCGRG00001021836	Pde12	72	60.771	Cricetulus_griseus_chok1gshd
ENSPLAG00000023871	pde12	80	60.722	ENSCGRG00000012319	Pde12	72	60.771	Cricetulus_griseus_crigri
ENSPLAG00000023871	pde12	80	76.782	ENSCSEG00000018538	pde12	78	76.782	Cynoglossus_semilaevis
ENSPLAG00000023871	pde12	81	62.500	ENSCVAG00000003624	pde12	70	62.500	Cyprinodon_variegatus
ENSPLAG00000023871	pde12	95	58.513	ENSDARG00000030964	pde12	85	58.513	Danio_rerio
ENSPLAG00000023871	pde12	81	60.486	ENSDNOG00000048413	PDE12	73	60.486	Dasypus_novemcinctus
ENSPLAG00000023871	pde12	81	61.765	ENSDORG00000004313	Pde12	72	61.991	Dipodomys_ordii
ENSPLAG00000023871	pde12	80	37.188	FBgn0051759	CG31759	77	37.188	Drosophila_melanogaster
ENSPLAG00000023871	pde12	74	45.205	ENSEBUG00000004803	pde12	75	45.205	Eptatretus_burgeri
ENSPLAG00000023871	pde12	81	61.538	ENSEASG00005000644	PDE12	72	61.798	Equus_asinus_asinus
ENSPLAG00000023871	pde12	81	61.765	ENSECAG00000005326	PDE12	72	62.022	Equus_caballus
ENSPLAG00000023871	pde12	80	69.555	ENSELUG00000014391	pde12	71	69.555	Esox_lucius
ENSPLAG00000023871	pde12	80	61.036	ENSFCAG00000031696	PDE12	72	60.899	Felis_catus
ENSPLAG00000023871	pde12	81	62.587	ENSFALG00000008401	PDE12	91	62.587	Ficedula_albicollis
ENSPLAG00000023871	pde12	81	61.086	ENSFDAG00000021278	PDE12	72	61.348	Fukomys_damarensis
ENSPLAG00000023871	pde12	74	82.957	ENSFHEG00000018967	pde12	66	82.673	Fundulus_heteroclitus
ENSPLAG00000023871	pde12	79	69.718	ENSGMOG00000018041	pde12	76	69.718	Gadus_morhua
ENSPLAG00000023871	pde12	93	58.367	ENSGALG00000052355	PDE12	85	58.367	Gallus_gallus
ENSPLAG00000023871	pde12	81	91.686	ENSGAFG00000002045	pde12	73	91.686	Gambusia_affinis
ENSPLAG00000023871	pde12	80	79.167	ENSGACG00000003914	pde12	73	79.167	Gasterosteus_aculeatus
ENSPLAG00000023871	pde12	88	58.368	ENSGAGG00000010266	PDE12	77	58.368	Gopherus_agassizii
ENSPLAG00000023871	pde12	81	61.348	ENSGGOG00000003312	PDE12	72	61.765	Gorilla_gorilla
ENSPLAG00000023871	pde12	80	80.556	ENSHBUG00000023370	pde12	73	80.556	Haplochromis_burtoni
ENSPLAG00000023871	pde12	81	60.407	ENSHGLG00000005661	PDE12	72	60.860	Heterocephalus_glaber_female
ENSPLAG00000023871	pde12	81	60.407	ENSHGLG00100001136	PDE12	72	60.860	Heterocephalus_glaber_male
ENSPLAG00000023871	pde12	80	73.576	ENSHCOG00000013749	pde12	73	73.576	Hippocampus_comes
ENSPLAG00000023871	pde12	80	66.512	ENSIPUG00000007123	Pde12	73	66.512	Ictalurus_punctatus
ENSPLAG00000023871	pde12	81	61.312	ENSSTOG00000007861	PDE12	72	61.573	Ictidomys_tridecemlineatus
ENSPLAG00000023871	pde12	81	60.449	ENSJJAG00000006038	Pde12	72	60.449	Jaculus_jaculus
ENSPLAG00000023871	pde12	80	81.379	ENSKMAG00000018523	pde12	75	81.193	Kryptolebias_marmoratus
ENSPLAG00000023871	pde12	80	79.863	ENSLBEG00000009762	PDE12	72	81.019	Labrus_bergylta
ENSPLAG00000023871	pde12	80	77.397	ENSLBEG00000026775	pde12	74	77.397	Labrus_bergylta
ENSPLAG00000023871	pde12	80	63.805	ENSLACG00000015492	PDE12	73	63.805	Latimeria_chalumnae
ENSPLAG00000023871	pde12	81	66.898	ENSLOCG00000013277	pde12	73	66.898	Lepisosteus_oculatus
ENSPLAG00000023871	pde12	81	61.400	ENSLAFG00000002821	PDE12	78	61.486	Loxodonta_africana
ENSPLAG00000023871	pde12	81	61.348	ENSMFAG00000030966	PDE12	72	61.765	Macaca_fascicularis
ENSPLAG00000023871	pde12	81	61.348	ENSMMUG00000004052	PDE12	72	61.765	Macaca_mulatta
ENSPLAG00000023871	pde12	81	61.348	ENSMNEG00000030068	PDE12	72	61.765	Macaca_nemestrina
ENSPLAG00000023871	pde12	81	61.348	ENSMLEG00000036137	PDE12	72	61.765	Mandrillus_leucophaeus
ENSPLAG00000023871	pde12	80	82.407	ENSMAMG00000014415	pde12	73	82.407	Mastacembelus_armatus
ENSPLAG00000023871	pde12	80	80.556	ENSMZEG00005016132	pde12	73	80.556	Maylandia_zebra
ENSPLAG00000023871	pde12	80	78.923	ENSMZEG00005028202	-	75	78.220	Maylandia_zebra
ENSPLAG00000023871	pde12	59	67.188	ENSMGAG00000006449	PDE12	99	67.188	Meleagris_gallopavo
ENSPLAG00000023871	pde12	81	60.090	ENSMAUG00000000442	Pde12	79	60.090	Mesocricetus_auratus
ENSPLAG00000023871	pde12	81	61.486	ENSMICG00000005723	PDE12	72	61.538	Microcebus_murinus
ENSPLAG00000023871	pde12	81	61.644	ENSMOCG00000020734	Pde12	72	61.644	Microtus_ochrogaster
ENSPLAG00000023871	pde12	80	77.136	ENSMMOG00000013636	pde12	73	77.136	Mola_mola
ENSPLAG00000023871	pde12	81	59.775	ENSMODG00000000155	PDE12	74	59.775	Monodelphis_domestica
ENSPLAG00000023871	pde12	80	79.487	ENSMALG00000022647	pde12	73	79.487	Monopterus_albus
ENSPLAG00000023871	pde12	81	60.860	MGP_CAROLIEiJ_G0019032	Pde12	72	61.312	Mus_caroli
ENSPLAG00000023871	pde12	81	61.312	ENSMUSG00000043702	Pde12	72	61.765	Mus_musculus
ENSPLAG00000023871	pde12	81	61.765	MGP_PahariEiJ_G0030049	Pde12	72	61.765	Mus_pahari
ENSPLAG00000023871	pde12	81	61.312	MGP_SPRETEiJ_G0019916	Pde12	72	61.765	Mus_spretus
ENSPLAG00000023871	pde12	94	55.299	ENSMPUG00000016869	PDE12	84	55.684	Mustela_putorius_furo
ENSPLAG00000023871	pde12	81	60.899	ENSMLUG00000026487	PDE12	73	61.573	Myotis_lucifugus
ENSPLAG00000023871	pde12	81	61.187	ENSNGAG00000001228	Pde12	72	61.187	Nannospalax_galili
ENSPLAG00000023871	pde12	81	60.899	ENSNLEG00000007269	-	72	61.312	Nomascus_leucogenys
ENSPLAG00000023871	pde12	89	56.795	ENSNLEG00000034833	-	81	57.143	Nomascus_leucogenys
ENSPLAG00000023871	pde12	81	60.093	ENSMEUG00000006786	PDE12	72	60.422	Notamacropus_eugenii
ENSPLAG00000023871	pde12	81	61.298	ENSOPRG00000015273	PDE12	73	62.192	Ochotona_princeps
ENSPLAG00000023871	pde12	81	61.086	ENSODEG00000006268	PDE12	72	61.538	Octodon_degus
ENSPLAG00000023871	pde12	80	80.556	ENSONIG00000004293	pde12	77	80.556	Oreochromis_niloticus
ENSPLAG00000023871	pde12	74	58.968	ENSOANG00000012885	PDE12	74	59.951	Ornithorhynchus_anatinus
ENSPLAG00000023871	pde12	81	61.400	ENSOCUG00000000823	PDE12	72	62.528	Oryctolagus_cuniculus
ENSPLAG00000023871	pde12	80	78.972	ENSORLG00000017444	pde12	73	78.972	Oryzias_latipes
ENSPLAG00000023871	pde12	80	78.738	ENSORLG00020010469	pde12	73	78.738	Oryzias_latipes_hni
ENSPLAG00000023871	pde12	80	78.972	ENSORLG00015004093	pde12	73	78.972	Oryzias_latipes_hsok
ENSPLAG00000023871	pde12	80	78.788	ENSOMEG00000020900	pde12	73	78.788	Oryzias_melastigma
ENSPLAG00000023871	pde12	81	61.124	ENSOGAG00000024093	PDE12	72	61.538	Otolemur_garnettii
ENSPLAG00000023871	pde12	81	62.022	ENSOARG00000013642	PDE12	79	62.387	Ovis_aries
ENSPLAG00000023871	pde12	81	61.124	ENSPPAG00000034712	PDE12	72	61.538	Pan_paniscus
ENSPLAG00000023871	pde12	80	61.036	ENSPPRG00000011738	PDE12	72	60.899	Panthera_pardus
ENSPLAG00000023871	pde12	81	59.645	ENSPTIG00000019166	PDE12	85	59.645	Panthera_tigris_altaica
ENSPLAG00000023871	pde12	81	61.124	ENSPTRG00000030221	PDE12	72	61.538	Pan_troglodytes
ENSPLAG00000023871	pde12	81	61.124	ENSPANG00000007324	PDE12	72	61.538	Papio_anubis
ENSPLAG00000023871	pde12	80	65.035	ENSPKIG00000025354	pde12	73	65.035	Paramormyrops_kingsleyae
ENSPLAG00000023871	pde12	88	59.205	ENSPSIG00000004926	PDE12	77	59.205	Pelodiscus_sinensis
ENSPLAG00000023871	pde12	81	69.838	ENSPMGG00000006742	pde12	88	62.279	Periophthalmus_magnuspinnatus
ENSPLAG00000023871	pde12	76	61.429	ENSPEMG00000007259	Pde12	80	61.722	Peromyscus_maniculatus_bairdii
ENSPLAG00000023871	pde12	81	97.059	ENSPFOG00000011864	pde12	74	97.059	Poecilia_formosa
ENSPLAG00000023871	pde12	81	99.304	ENSPMEG00000005674	pde12	74	99.304	Poecilia_mexicana
ENSPLAG00000023871	pde12	81	96.752	ENSPREG00000022831	pde12	74	96.752	Poecilia_reticulata
ENSPLAG00000023871	pde12	81	61.261	ENSPPYG00000013769	PDE12	72	61.678	Pongo_abelii
ENSPLAG00000023871	pde12	81	61.486	ENSPCOG00000026004	PDE12	72	61.538	Propithecus_coquereli
ENSPLAG00000023871	pde12	81	60.860	ENSPVAG00000008885	PDE12	73	60.811	Pteropus_vampyrus
ENSPLAG00000023871	pde12	80	80.556	ENSPNYG00000013258	pde12	73	80.556	Pundamilia_nyererei
ENSPLAG00000023871	pde12	80	70.327	ENSPNAG00000029032	pde12	73	70.327	Pygocentrus_nattereri
ENSPLAG00000023871	pde12	81	61.538	ENSRNOG00000059442	Pde12	72	61.538	Rattus_norvegicus
ENSPLAG00000023871	pde12	81	61.573	ENSRBIG00000040704	PDE12	72	61.765	Rhinopithecus_bieti
ENSPLAG00000023871	pde12	81	61.573	ENSRROG00000031279	PDE12	72	61.765	Rhinopithecus_roxellana
ENSPLAG00000023871	pde12	81	62.077	ENSSBOG00000023974	PDE12	72	62.217	Saimiri_boliviensis_boliviensis
ENSPLAG00000023871	pde12	63	67.857	ENSSFOG00015003468	pde12	63	67.857	Scleropages_formosus
ENSPLAG00000023871	pde12	85	77.342	ENSSMAG00000003258	pde12	77	77.342	Scophthalmus_maximus
ENSPLAG00000023871	pde12	80	82.639	ENSSDUG00000020470	pde12	73	82.639	Seriola_dumerili
ENSPLAG00000023871	pde12	80	81.030	ENSSLDG00000019833	pde12	72	81.030	Seriola_lalandi_dorsalis
ENSPLAG00000023871	pde12	81	61.538	ENSSARG00000007201	PDE12	73	61.991	Sorex_araneus
ENSPLAG00000023871	pde12	80	82.529	ENSSPAG00000014980	pde12	74	82.529	Stegastes_partitus
ENSPLAG00000023871	pde12	60	57.009	ENSSSCG00000034476	-	74	57.009	Sus_scrofa
ENSPLAG00000023871	pde12	81	61.538	ENSSSCG00000011465	-	72	61.991	Sus_scrofa
ENSPLAG00000023871	pde12	69	64.960	ENSTGUG00000007290	PDE12	100	64.960	Taeniopygia_guttata
ENSPLAG00000023871	pde12	80	77.752	ENSTRUG00000005159	pde12	72	77.752	Takifugu_rubripes
ENSPLAG00000023871	pde12	80	75.115	ENSTNIG00000017497	pde12	74	75.115	Tetraodon_nigroviridis
ENSPLAG00000023871	pde12	57	66.013	ENSTBEG00000008202	PDE12	51	66.013	Tupaia_belangeri
ENSPLAG00000023871	pde12	81	61.312	ENSTTRG00000014707	PDE12	72	61.712	Tursiops_truncatus
ENSPLAG00000023871	pde12	51	57.951	ENSUAMG00000008368	-	64	58.947	Ursus_americanus
ENSPLAG00000023871	pde12	81	61.086	ENSUAMG00000020634	-	72	61.712	Ursus_americanus
ENSPLAG00000023871	pde12	80	61.416	ENSUMAG00000021906	PDE12	99	61.678	Ursus_maritimus
ENSPLAG00000023871	pde12	81	61.086	ENSVVUG00000020335	PDE12	70	61.348	Vulpes_vulpes
ENSPLAG00000023871	pde12	80	52.582	ENSXETG00000008653	pde12	75	52.582	Xenopus_tropicalis
ENSPLAG00000023871	pde12	80	94.444	ENSXCOG00000000407	pde12	76	94.444	Xiphophorus_couchianus
ENSPLAG00000023871	pde12	80	95.602	ENSXMAG00000013370	pde12	74	95.602	Xiphophorus_maculatus