EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000005 (Gene tree)
Gene ID: -
Gene Symbol: ccdc12
Alias: -
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 3577 bases
Position: chrGL476426:77663-81239
Accession: ZDB-GENE-040801-108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000005	cwf18	PF08315.12	5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000005	-	698	-	ENSPMAP00000000005	167 (aa)	-	S4R476

Gene Model

Click here to download ENSPMAG00000000005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000005	ccdc12	98	64.286	ENSG00000160799	CCDC12	94	66.879	Homo_sapiens
ENSPMAG00000000005	ccdc12	92	73.885	ENSAPOG00000014426	ccdc12	58	73.885	Acanthochromis_polyacanthus
ENSPMAG00000000005	ccdc12	99	66.272	ENSAMEG00000012658	CCDC12	94	66.879	Ailuropoda_melanoleuca
ENSPMAG00000000005	ccdc12	67	79.464	ENSACIG00000015192	ccdc12	80	79.464	Amphilophus_citrinellus
ENSPMAG00000000005	ccdc12	69	79.130	ENSACIG00000022676	-	82	79.130	Amphilophus_citrinellus
ENSPMAG00000000005	ccdc12	92	73.885	ENSAOCG00000024127	ccdc12	94	73.885	Amphiprion_ocellaris
ENSPMAG00000000005	ccdc12	92	73.885	ENSAPEG00000009155	ccdc12	83	73.885	Amphiprion_percula
ENSPMAG00000000005	ccdc12	77	72.727	ENSATEG00000004807	ccdc12	99	72.727	Anabas_testudineus
ENSPMAG00000000005	ccdc12	75	69.231	ENSAPLG00000005482	CCDC12	95	69.231	Anas_platyrhynchos
ENSPMAG00000000005	ccdc12	92	70.186	ENSACAG00000004727	CCDC12	83	70.186	Anolis_carolinensis
ENSPMAG00000000005	ccdc12	77	66.917	ENSANAG00000024483	CCDC12	99	67.669	Aotus_nancymaae
ENSPMAG00000000005	ccdc12	92	72.611	ENSACLG00000005356	ccdc12	96	72.611	Astatotilapia_calliptera
ENSPMAG00000000005	ccdc12	95	60.870	ENSACLG00000012742	-	96	62.581	Astatotilapia_calliptera
ENSPMAG00000000005	ccdc12	92	70.701	ENSAMXG00000016319	ccdc12	96	70.701	Astyanax_mexicanus
ENSPMAG00000000005	ccdc12	90	68.627	ENSBTAG00000011311	CCDC12	94	66.038	Bos_taurus
ENSPMAG00000000005	ccdc12	79	38.636	WBGene00022092	Y69A2AR.21	88	37.086	Caenorhabditis_elegans
ENSPMAG00000000005	ccdc12	95	64.815	ENSCJAG00000002280	CCDC12	94	66.879	Callithrix_jacchus
ENSPMAG00000000005	ccdc12	99	65.680	ENSCAFG00000013588	CCDC12	94	66.879	Canis_familiaris
ENSPMAG00000000005	ccdc12	99	65.680	ENSCAFG00020014024	CCDC12	87	66.879	Canis_lupus_dingo
ENSPMAG00000000005	ccdc12	90	68.627	ENSCHIG00000014512	CCDC12	94	66.038	Capra_hircus
ENSPMAG00000000005	ccdc12	99	64.497	ENSTSYG00000032837	CCDC12	94	66.242	Carlito_syrichta
ENSPMAG00000000005	ccdc12	98	64.671	ENSCPOG00000032515	CCDC12	94	66.242	Cavia_porcellus
ENSPMAG00000000005	ccdc12	95	64.815	ENSCCAG00000020126	CCDC12	87	66.879	Cebus_capucinus
ENSPMAG00000000005	ccdc12	97	55.215	ENSCATG00000033681	CCDC12	86	57.143	Cercocebus_atys
ENSPMAG00000000005	ccdc12	98	64.671	ENSCLAG00000016013	CCDC12	94	66.242	Chinchilla_lanigera
ENSPMAG00000000005	ccdc12	98	63.690	ENSCSAG00000016154	CCDC12	87	66.242	Chlorocebus_sabaeus
ENSPMAG00000000005	ccdc12	98	69.643	ENSCPBG00000015804	CCDC12	75	70.701	Chrysemys_picta_bellii
ENSPMAG00000000005	ccdc12	92	45.283	ENSCING00000005261	-	94	45.912	Ciona_intestinalis
ENSPMAG00000000005	ccdc12	97	63.855	ENSCANG00000020857	CCDC12	87	66.242	Colobus_angolensis_palliatus
ENSPMAG00000000005	ccdc12	99	66.272	ENSCGRG00001000459	Ccdc12	94	66.879	Cricetulus_griseus_chok1gshd
ENSPMAG00000000005	ccdc12	99	66.272	ENSCGRG00000012816	Ccdc12	94	66.879	Cricetulus_griseus_crigri
ENSPMAG00000000005	ccdc12	92	70.064	ENSCSEG00000004543	ccdc12	96	70.064	Cynoglossus_semilaevis
ENSPMAG00000000005	ccdc12	77	74.242	ENSCVAG00000011342	ccdc12	99	74.242	Cyprinodon_variegatus
ENSPMAG00000000005	ccdc12	92	70.064	ENSDARG00000023003	ccdc12	96	70.064	Danio_rerio
ENSPMAG00000000005	ccdc12	99	59.172	ENSDORG00000024399	-	94	61.146	Dipodomys_ordii
ENSPMAG00000000005	ccdc12	84	64.828	ENSDORG00000016567	-	94	65.605	Dipodomys_ordii
ENSPMAG00000000005	ccdc12	93	42.308	FBgn0039732	CG15525	89	41.176	Drosophila_melanogaster
ENSPMAG00000000005	ccdc12	66	62.281	ENSETEG00000000030	CCDC12	91	63.462	Echinops_telfairi
ENSPMAG00000000005	ccdc12	95	56.604	ENSEBUG00000005674	ccdc12	96	62.581	Eptatretus_burgeri
ENSPMAG00000000005	ccdc12	99	62.941	ENSEASG00005008148	-	61	67.114	Equus_asinus_asinus
ENSPMAG00000000005	ccdc12	98	58.683	ENSECAG00000008649	CCDC12	94	59.873	Equus_caballus
ENSPMAG00000000005	ccdc12	92	70.253	ENSELUG00000024105	ccdc12	95	71.519	Esox_lucius
ENSPMAG00000000005	ccdc12	99	65.089	ENSFCAG00000015474	CCDC12	94	66.242	Felis_catus
ENSPMAG00000000005	ccdc12	88	59.868	ENSFALG00000001895	CCDC12	93	59.868	Ficedula_albicollis
ENSPMAG00000000005	ccdc12	98	65.476	ENSFDAG00000002549	CCDC12	95	66.879	Fukomys_damarensis
ENSPMAG00000000005	ccdc12	92	73.885	ENSFHEG00000016247	ccdc12	89	73.885	Fundulus_heteroclitus
ENSPMAG00000000005	ccdc12	92	64.331	ENSGMOG00000016901	ccdc12	96	64.331	Gadus_morhua
ENSPMAG00000000005	ccdc12	92	73.248	ENSGAFG00000006762	ccdc12	96	73.248	Gambusia_affinis
ENSPMAG00000000005	ccdc12	92	73.248	ENSGACG00000008629	ccdc12	96	73.248	Gasterosteus_aculeatus
ENSPMAG00000000005	ccdc12	99	70.414	ENSGAGG00000019688	CCDC12	93	71.338	Gopherus_agassizii
ENSPMAG00000000005	ccdc12	98	64.286	ENSGGOG00000009012	CCDC12	87	66.879	Gorilla_gorilla
ENSPMAG00000000005	ccdc12	92	72.611	ENSHBUG00000016447	ccdc12	96	72.611	Haplochromis_burtoni
ENSPMAG00000000005	ccdc12	99	65.680	ENSHGLG00000014058	CCDC12	94	66.879	Heterocephalus_glaber_female
ENSPMAG00000000005	ccdc12	99	65.680	ENSHGLG00100005918	CCDC12	94	66.879	Heterocephalus_glaber_male
ENSPMAG00000000005	ccdc12	92	72.152	ENSHCOG00000015164	ccdc12	96	72.152	Hippocampus_comes
ENSPMAG00000000005	ccdc12	92	68.153	ENSIPUG00000001310	Ccdc12	96	68.153	Ictalurus_punctatus
ENSPMAG00000000005	ccdc12	99	65.680	ENSSTOG00000003085	CCDC12	94	66.879	Ictidomys_tridecemlineatus
ENSPMAG00000000005	ccdc12	99	65.680	ENSJJAG00000014918	Ccdc12	94	66.879	Jaculus_jaculus
ENSPMAG00000000005	ccdc12	92	68.553	ENSKMAG00000013891	ccdc12	96	68.553	Kryptolebias_marmoratus
ENSPMAG00000000005	ccdc12	89	76.159	ENSLBEG00000024714	ccdc12	83	74.684	Labrus_bergylta
ENSPMAG00000000005	ccdc12	92	69.872	ENSLOCG00000005683	ccdc12	88	70.513	Lepisosteus_oculatus
ENSPMAG00000000005	ccdc12	66	73.214	ENSLAFG00000022573	-	98	73.214	Loxodonta_africana
ENSPMAG00000000005	ccdc12	97	62.651	ENSLAFG00000027745	-	96	64.331	Loxodonta_africana
ENSPMAG00000000005	ccdc12	98	63.690	ENSMFAG00000002976	CCDC12	87	66.242	Macaca_fascicularis
ENSPMAG00000000005	ccdc12	98	63.690	ENSMMUG00000019810	CCDC12	87	66.242	Macaca_mulatta
ENSPMAG00000000005	ccdc12	98	63.690	ENSMNEG00000035785	CCDC12	87	66.242	Macaca_nemestrina
ENSPMAG00000000005	ccdc12	98	63.690	ENSMLEG00000038060	CCDC12	87	66.242	Mandrillus_leucophaeus
ENSPMAG00000000005	ccdc12	92	71.975	ENSMAMG00000012165	ccdc12	96	73.418	Mastacembelus_armatus
ENSPMAG00000000005	ccdc12	89	62.252	ENSMZEG00005019013	-	95	62.252	Maylandia_zebra
ENSPMAG00000000005	ccdc12	92	72.611	ENSMZEG00005014728	ccdc12	96	72.611	Maylandia_zebra
ENSPMAG00000000005	ccdc12	78	67.407	ENSMGAG00000002815	CCDC12	89	65.605	Meleagris_gallopavo
ENSPMAG00000000005	ccdc12	99	66.272	ENSMAUG00000008879	Ccdc12	94	66.879	Mesocricetus_auratus
ENSPMAG00000000005	ccdc12	98	62.500	ENSMICG00000032886	CCDC12	94	65.190	Microcebus_murinus
ENSPMAG00000000005	ccdc12	99	65.089	ENSMOCG00000004483	Ccdc12	94	66.242	Microtus_ochrogaster
ENSPMAG00000000005	ccdc12	60	83.000	ENSMMOG00000001860	ccdc12	77	76.577	Mola_mola
ENSPMAG00000000005	ccdc12	92	63.694	ENSMODG00000022615	-	94	63.694	Monodelphis_domestica
ENSPMAG00000000005	ccdc12	92	66.242	ENSMODG00000025021	-	94	66.242	Monodelphis_domestica
ENSPMAG00000000005	ccdc12	98	66.667	ENSMODG00000013967	-	94	70.253	Monodelphis_domestica
ENSPMAG00000000005	ccdc12	92	71.975	ENSMALG00000011850	ccdc12	96	71.975	Monopterus_albus
ENSPMAG00000000005	ccdc12	99	65.680	MGP_CAROLIEiJ_G0032737	-	94	66.879	Mus_caroli
ENSPMAG00000000005	ccdc12	99	65.089	ENSMUSG00000019659	Ccdc12	94	66.242	Mus_musculus
ENSPMAG00000000005	ccdc12	99	65.680	MGP_PahariEiJ_G0015604	Ccdc12	94	66.879	Mus_pahari
ENSPMAG00000000005	ccdc12	99	64.497	MGP_SPRETEiJ_G0033885	Ccdc12	94	66.242	Mus_spretus
ENSPMAG00000000005	ccdc12	99	62.130	ENSMLUG00000009547	CCDC12	94	63.057	Myotis_lucifugus
ENSPMAG00000000005	ccdc12	98	64.671	ENSNGAG00000004149	Ccdc12	94	66.879	Nannospalax_galili
ENSPMAG00000000005	ccdc12	92	69.481	ENSNBRG00000015275	ccdc12	96	69.481	Neolamprologus_brichardi
ENSPMAG00000000005	ccdc12	94	65.217	ENSNLEG00000006219	CCDC12	94	66.879	Nomascus_leucogenys
ENSPMAG00000000005	ccdc12	95	65.000	ENSOPRG00000005086	CCDC12	90	65.541	Ochotona_princeps
ENSPMAG00000000005	ccdc12	99	65.089	ENSODEG00000012202	CCDC12	94	66.242	Octodon_degus
ENSPMAG00000000005	ccdc12	92	72.611	ENSONIG00000003061	ccdc12	96	72.611	Oreochromis_niloticus
ENSPMAG00000000005	ccdc12	78	67.939	ENSOANG00000004263	-	91	68.992	Ornithorhynchus_anatinus
ENSPMAG00000000005	ccdc12	99	66.272	ENSOCUG00000012431	CCDC12	80	67.516	Oryctolagus_cuniculus
ENSPMAG00000000005	ccdc12	86	76.351	ENSORLG00000008126	ccdc12	96	72.327	Oryzias_latipes
ENSPMAG00000000005	ccdc12	92	73.885	ENSORLG00020013927	ccdc12	96	73.885	Oryzias_latipes_hni
ENSPMAG00000000005	ccdc12	92	73.885	ENSORLG00015020115	ccdc12	96	73.885	Oryzias_latipes_hsok
ENSPMAG00000000005	ccdc12	92	73.077	ENSOMEG00000014082	ccdc12	96	73.077	Oryzias_melastigma
ENSPMAG00000000005	ccdc12	92	73.077	ENSOMEG00000022304	ccdc12	96	73.077	Oryzias_melastigma
ENSPMAG00000000005	ccdc12	66	69.643	ENSOGAG00000016807	CCDC12	100	69.643	Otolemur_garnettii
ENSPMAG00000000005	ccdc12	68	71.795	ENSOARG00000006426	CCDC12	99	66.667	Ovis_aries
ENSPMAG00000000005	ccdc12	98	64.881	ENSPPAG00000028782	CCDC12	87	66.879	Pan_paniscus
ENSPMAG00000000005	ccdc12	99	65.089	ENSPPRG00000013547	CCDC12	94	66.242	Panthera_pardus
ENSPMAG00000000005	ccdc12	99	65.089	ENSPTIG00000014875	CCDC12	90	66.242	Panthera_tigris_altaica
ENSPMAG00000000005	ccdc12	98	64.286	ENSPTRG00000014862	CCDC12	87	66.879	Pan_troglodytes
ENSPMAG00000000005	ccdc12	98	63.690	ENSPANG00000017485	CCDC12	89	66.242	Papio_anubis
ENSPMAG00000000005	ccdc12	92	68.987	ENSPKIG00000019130	ccdc12	96	69.620	Paramormyrops_kingsleyae
ENSPMAG00000000005	ccdc12	66	78.378	ENSPSIG00000010867	CCDC12	100	78.378	Pelodiscus_sinensis
ENSPMAG00000000005	ccdc12	92	73.248	ENSPMGG00000012211	ccdc12	96	73.885	Periophthalmus_magnuspinnatus
ENSPMAG00000000005	ccdc12	99	66.272	ENSPEMG00000022196	-	94	66.879	Peromyscus_maniculatus_bairdii
ENSPMAG00000000005	ccdc12	98	52.976	ENSPEMG00000001376	-	94	53.165	Peromyscus_maniculatus_bairdii
ENSPMAG00000000005	ccdc12	100	67.059	ENSPCIG00000025941	CCDC12	94	70.513	Phascolarctos_cinereus
ENSPMAG00000000005	ccdc12	92	73.885	ENSPFOG00000000343	ccdc12	96	73.885	Poecilia_formosa
ENSPMAG00000000005	ccdc12	92	73.248	ENSPLAG00000019010	ccdc12	96	73.248	Poecilia_latipinna
ENSPMAG00000000005	ccdc12	92	73.885	ENSPMEG00000022371	ccdc12	78	73.885	Poecilia_mexicana
ENSPMAG00000000005	ccdc12	92	73.248	ENSPREG00000020932	ccdc12	78	73.248	Poecilia_reticulata
ENSPMAG00000000005	ccdc12	98	64.286	ENSPPYG00000013924	CCDC12	77	66.879	Pongo_abelii
ENSPMAG00000000005	ccdc12	99	64.706	ENSPCAG00000005800	CCDC12	94	65.823	Procavia_capensis
ENSPMAG00000000005	ccdc12	99	63.529	ENSPCOG00000018682	CCDC12	87	65.823	Propithecus_coquereli
ENSPMAG00000000005	ccdc12	99	65.680	ENSPVAG00000004204	CCDC12	94	66.242	Pteropus_vampyrus
ENSPMAG00000000005	ccdc12	92	72.611	ENSPNYG00000016295	ccdc12	96	72.611	Pundamilia_nyererei
ENSPMAG00000000005	ccdc12	92	55.414	ENSPNAG00000028558	ccdc12	90	74.107	Pygocentrus_nattereri
ENSPMAG00000000005	ccdc12	99	65.680	ENSRNOG00000020946	Ccdc12	94	66.879	Rattus_norvegicus
ENSPMAG00000000005	ccdc12	98	63.690	ENSRBIG00000039910	CCDC12	87	66.242	Rhinopithecus_bieti
ENSPMAG00000000005	ccdc12	97	63.855	ENSRROG00000039721	CCDC12	94	66.242	Rhinopithecus_roxellana
ENSPMAG00000000005	ccdc12	95	64.815	ENSSBOG00000035443	CCDC12	87	66.879	Saimiri_boliviensis_boliviensis
ENSPMAG00000000005	ccdc12	98	69.091	ENSSHAG00000003265	-	94	70.968	Sarcophilus_harrisii
ENSPMAG00000000005	ccdc12	92	67.089	ENSSFOG00015001307	ccdc12	96	67.089	Scleropages_formosus
ENSPMAG00000000005	ccdc12	83	78.873	ENSSMAG00000019856	ccdc12	96	75.316	Scophthalmus_maximus
ENSPMAG00000000005	ccdc12	92	70.701	ENSSDUG00000006549	ccdc12	96	71.975	Seriola_dumerili
ENSPMAG00000000005	ccdc12	92	72.611	ENSSLDG00000015956	ccdc12	96	73.885	Seriola_lalandi_dorsalis
ENSPMAG00000000005	ccdc12	86	50.000	ENSSPUG00000013054	CCDC12	91	50.000	Sphenodon_punctatus
ENSPMAG00000000005	ccdc12	92	73.248	ENSSPAG00000007010	ccdc12	96	73.248	Stegastes_partitus
ENSPMAG00000000005	ccdc12	99	65.476	ENSSSCG00000011329	-	94	66.667	Sus_scrofa
ENSPMAG00000000005	ccdc12	60	48.515	ENSSSCG00000007882	-	68	48.515	Sus_scrofa
ENSPMAG00000000005	ccdc12	69	60.000	ENSTGUG00000000186	CCDC12	83	66.038	Taeniopygia_guttata
ENSPMAG00000000005	ccdc12	92	67.532	ENSTRUG00000014023	ccdc12	82	67.532	Takifugu_rubripes
ENSPMAG00000000005	ccdc12	92	68.153	ENSTNIG00000018407	ccdc12	95	68.153	Tetraodon_nigroviridis
ENSPMAG00000000005	ccdc12	99	45.882	ENSTBEG00000000048	CCDC12	94	44.937	Tupaia_belangeri
ENSPMAG00000000005	ccdc12	99	62.353	ENSTTRG00000015854	CCDC12	93	59.880	Tursiops_truncatus
ENSPMAG00000000005	ccdc12	99	59.763	ENSUAMG00000025548	CCDC12	90	71.756	Ursus_americanus
ENSPMAG00000000005	ccdc12	99	65.680	ENSUMAG00000004346	CCDC12	94	66.879	Ursus_maritimus
ENSPMAG00000000005	ccdc12	66	55.752	ENSVPAG00000000070	-	91	56.311	Vicugna_pacos
ENSPMAG00000000005	ccdc12	99	65.680	ENSVVUG00000004582	CCDC12	94	66.879	Vulpes_vulpes
ENSPMAG00000000005	ccdc12	77	72.308	ENSXETG00000013123	ccdc12	98	72.308	Xenopus_tropicalis
ENSPMAG00000000005	ccdc12	92	72.611	ENSXCOG00000019741	ccdc12	96	72.611	Xiphophorus_couchianus
ENSPMAG00000000005	ccdc12	92	71.975	ENSXMAG00000014098	ccdc12	78	71.975	Xiphophorus_maculatus