EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000186 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 9008 bases
Position: chrGL476721:117971-126978
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000216	ResIII	PF04851.15	6.3e-06	1	1
ENSPMAP00000000216	DEAD	PF00270.29	2.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000216	-	1446	-	ENSPMAP00000000216	420 (aa)	-	S4R4T7

Gene Model

Click here to download ENSPMAG00000000186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000186	-	81	49.153	ENSPMAG00000009118	-	55	49.153
ENSPMAG00000000186	-	78	34.940	ENSPMAG00000009017	ddx39aa	77	34.940
ENSPMAG00000000186	-	69	36.774	ENSPMAG00000007486	ddx55	59	37.179
ENSPMAG00000000186	-	78	37.870	ENSPMAG00000009147	ddx18	61	37.870
ENSPMAG00000000186	-	96	45.346	ENSPMAG00000001195	ddx49	90	45.346
ENSPMAG00000000186	-	81	36.127	ENSPMAG00000004337	ddx54	87	36.127
ENSPMAG00000000186	-	81	35.616	ENSPMAG00000003524	-	67	35.616
ENSPMAG00000000186	-	81	37.701	ENSPMAG00000008625	ddx23	50	37.701
ENSPMAG00000000186	-	86	35.326	ENSPMAG00000007168	ddx6	74	35.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000186	-	100	86.493	ENSG00000213782	DDX47	93	86.493	Homo_sapiens
ENSPMAG00000000186	-	98	86.893	ENSAPOG00000021751	ddx47	87	86.842	Acanthochromis_polyacanthus
ENSPMAG00000000186	-	100	86.730	ENSAMEG00000010740	DDX47	93	86.730	Ailuropoda_melanoleuca
ENSPMAG00000000186	-	97	85.575	ENSACIG00000022802	ddx47	87	85.407	Amphilophus_citrinellus
ENSPMAG00000000186	-	97	86.618	ENSAOCG00000015213	ddx47	86	86.603	Amphiprion_ocellaris
ENSPMAG00000000186	-	98	86.265	ENSAPEG00000014476	ddx47	89	88.773	Amphiprion_percula
ENSPMAG00000000186	-	98	85.680	ENSATEG00000010277	ddx47	87	85.646	Anabas_testudineus
ENSPMAG00000000186	-	97	89.731	ENSAPLG00000015324	DDX47	91	89.048	Anas_platyrhynchos
ENSPMAG00000000186	-	100	88.152	ENSACAG00000010648	DDX47	95	88.152	Anolis_carolinensis
ENSPMAG00000000186	-	81	90.294	ENSANAG00000025235	DDX47	92	90.294	Aotus_nancymaae
ENSPMAG00000000186	-	99	85.919	ENSAMXG00000010727	ddx47	89	85.919	Astyanax_mexicanus
ENSPMAG00000000186	-	100	86.256	ENSBTAG00000019608	DDX47	92	86.256	Bos_taurus
ENSPMAG00000000186	-	97	67.718	WBGene00012059	T26G10.1	84	67.718	Caenorhabditis_elegans
ENSPMAG00000000186	-	100	86.493	ENSCJAG00000021633	DDX47	93	86.988	Callithrix_jacchus
ENSPMAG00000000186	-	98	86.747	ENSCAFG00000013224	DDX47	88	86.256	Canis_familiaris
ENSPMAG00000000186	-	98	86.747	ENSCAFG00020006612	DDX47	93	86.256	Canis_lupus_dingo
ENSPMAG00000000186	-	100	86.256	ENSCHIG00000026011	DDX47	92	86.256	Capra_hircus
ENSPMAG00000000186	-	100	86.493	ENSTSYG00000002978	DDX47	93	86.493	Carlito_syrichta
ENSPMAG00000000186	-	62	86.986	ENSCAPG00000002814	DDX47	98	86.986	Cavia_aperea
ENSPMAG00000000186	-	98	86.506	ENSCPOG00000035172	DDX47	93	86.019	Cavia_porcellus
ENSPMAG00000000186	-	100	86.493	ENSCCAG00000025717	DDX47	93	86.493	Cebus_capucinus
ENSPMAG00000000186	-	54	86.222	ENSCATG00000038188	-	88	86.425	Cercocebus_atys
ENSPMAG00000000186	-	100	86.256	ENSCATG00000014281	-	93	86.256	Cercocebus_atys
ENSPMAG00000000186	-	100	85.782	ENSCLAG00000015856	DDX47	93	85.782	Chinchilla_lanigera
ENSPMAG00000000186	-	100	86.493	ENSCSAG00000008569	DDX47	93	86.493	Chlorocebus_sabaeus
ENSPMAG00000000186	-	93	57.545	ENSCHOG00000010943	DDX47	85	57.545	Choloepus_hoffmanni
ENSPMAG00000000186	-	100	87.678	ENSCPBG00000020967	-	93	87.678	Chrysemys_picta_bellii
ENSPMAG00000000186	-	96	73.086	ENSCING00000002081	-	94	71.059	Ciona_intestinalis
ENSPMAG00000000186	-	94	76.904	ENSCSAVG00000011566	-	88	76.904	Ciona_savignyi
ENSPMAG00000000186	-	100	86.493	ENSCANG00000040222	DDX47	93	86.493	Colobus_angolensis_palliatus
ENSPMAG00000000186	-	100	86.256	ENSCGRG00001014927	Ddx47	93	86.256	Cricetulus_griseus_chok1gshd
ENSPMAG00000000186	-	100	86.256	ENSCGRG00000010351	Ddx47	93	87.136	Cricetulus_griseus_crigri
ENSPMAG00000000186	-	95	85.250	ENSCSEG00000007687	ddx47	89	85.250	Cynoglossus_semilaevis
ENSPMAG00000000186	-	100	80.425	ENSDNOG00000040799	DDX47	93	80.425	Dasypus_novemcinctus
ENSPMAG00000000186	-	99	75.300	FBgn0032919	CG9253	84	74.299	Drosophila_melanogaster
ENSPMAG00000000186	-	75	90.698	ENSETEG00000011487	DDX47	76	90.698	Echinops_telfairi
ENSPMAG00000000186	-	100	86.493	ENSEASG00005014653	DDX47	93	86.493	Equus_asinus_asinus
ENSPMAG00000000186	-	100	86.493	ENSECAG00000023622	DDX47	93	86.493	Equus_caballus
ENSPMAG00000000186	-	83	85.535	ENSEEUG00000008639	DDX47	77	85.535	Erinaceus_europaeus
ENSPMAG00000000186	-	98	85.472	ENSELUG00000009495	ddx47	79	85.337	Esox_lucius
ENSPMAG00000000186	-	100	86.967	ENSFCAG00000013990	DDX47	93	86.967	Felis_catus
ENSPMAG00000000186	-	98	89.512	ENSFALG00000011391	DDX47	91	88.571	Ficedula_albicollis
ENSPMAG00000000186	-	71	64.286	ENSFDAG00000004127	-	76	63.571	Fukomys_damarensis
ENSPMAG00000000186	-	100	85.782	ENSFDAG00000014635	-	93	85.782	Fukomys_damarensis
ENSPMAG00000000186	-	98	84.709	ENSFHEG00000011435	ddx47	87	84.689	Fundulus_heteroclitus
ENSPMAG00000000186	-	91	85.379	ENSGMOG00000010290	ddx47	100	85.379	Gadus_morhua
ENSPMAG00000000186	-	97	90.220	ENSGALG00000011794	DDX47	92	89.524	Gallus_gallus
ENSPMAG00000000186	-	98	84.951	ENSGAFG00000017403	ddx47	88	84.928	Gambusia_affinis
ENSPMAG00000000186	-	100	83.649	ENSGACG00000007092	ddx47	91	83.649	Gasterosteus_aculeatus
ENSPMAG00000000186	-	100	86.461	ENSGAGG00000023801	DDX47	84	86.461	Gopherus_agassizii
ENSPMAG00000000186	-	100	86.730	ENSGGOG00000005882	DDX47	93	86.730	Gorilla_gorilla
ENSPMAG00000000186	-	96	85.149	ENSHBUG00000022213	ddx47	87	84.689	Haplochromis_burtoni
ENSPMAG00000000186	-	100	86.493	ENSHGLG00000007623	DDX47	93	86.493	Heterocephalus_glaber_female
ENSPMAG00000000186	-	100	86.493	ENSHGLG00100009764	DDX47	93	86.493	Heterocephalus_glaber_male
ENSPMAG00000000186	-	98	85.542	ENSHCOG00000005496	ddx47	87	85.646	Hippocampus_comes
ENSPMAG00000000186	-	99	85.132	ENSIPUG00000023788	ddx47	89	85.132	Ictalurus_punctatus
ENSPMAG00000000186	-	100	86.256	ENSSTOG00000027266	DDX47	96	86.256	Ictidomys_tridecemlineatus
ENSPMAG00000000186	-	100	85.071	ENSJJAG00000000118	Ddx47	93	85.782	Jaculus_jaculus
ENSPMAG00000000186	-	97	85.158	ENSKMAG00000013071	ddx47	85	85.167	Kryptolebias_marmoratus
ENSPMAG00000000186	-	97	85.575	ENSLBEG00000028348	ddx47	86	85.238	Labrus_bergylta
ENSPMAG00000000186	-	100	89.048	ENSLACG00000013814	DDX47	93	89.048	Latimeria_chalumnae
ENSPMAG00000000186	-	100	86.493	ENSLAFG00000015474	DDX47	93	86.493	Loxodonta_africana
ENSPMAG00000000186	-	100	86.256	ENSMFAG00000042577	DDX47	93	86.256	Macaca_fascicularis
ENSPMAG00000000186	-	100	86.256	ENSMMUG00000017993	DDX47	93	86.256	Macaca_mulatta
ENSPMAG00000000186	-	100	75.118	ENSMNEG00000044164	DDX47	92	75.118	Macaca_nemestrina
ENSPMAG00000000186	-	100	86.256	ENSMLEG00000040358	-	93	86.256	Mandrillus_leucophaeus
ENSPMAG00000000186	-	54	87.111	ENSMLEG00000037204	-	78	87.111	Mandrillus_leucophaeus
ENSPMAG00000000186	-	98	85.194	ENSMAMG00000008915	ddx47	87	85.167	Mastacembelus_armatus
ENSPMAG00000000186	-	96	71.921	ENSMZEG00005004902	DDX47	86	71.564	Maylandia_zebra
ENSPMAG00000000186	-	89	47.507	ENSMZEG00005022989	-	85	47.507	Maylandia_zebra
ENSPMAG00000000186	-	97	89.731	ENSMGAG00000011857	DDX47	97	89.048	Meleagris_gallopavo
ENSPMAG00000000186	-	100	86.256	ENSMAUG00000012214	Ddx47	93	86.256	Mesocricetus_auratus
ENSPMAG00000000186	-	50	74.882	ENSMICG00000044024	-	95	74.882	Microcebus_murinus
ENSPMAG00000000186	-	81	85.437	ENSMICG00000010086	DDX47	99	86.230	Microcebus_murinus
ENSPMAG00000000186	-	100	86.256	ENSMOCG00000003693	Ddx47	93	86.256	Microtus_ochrogaster
ENSPMAG00000000186	-	98	82.082	ENSMMOG00000008610	ddx47	91	81.560	Mola_mola
ENSPMAG00000000186	-	100	86.730	ENSMODG00000018223	DDX47	92	86.730	Monodelphis_domestica
ENSPMAG00000000186	-	97	85.819	ENSMALG00000002420	ddx47	87	85.646	Monopterus_albus
ENSPMAG00000000186	-	100	86.493	MGP_CAROLIEiJ_G0028986	Ddx47	93	86.493	Mus_caroli
ENSPMAG00000000186	-	100	86.256	ENSMUSG00000030204	Ddx47	93	86.256	Mus_musculus
ENSPMAG00000000186	-	100	86.493	MGP_PahariEiJ_G0022748	Ddx47	93	86.493	Mus_pahari
ENSPMAG00000000186	-	100	86.256	MGP_SPRETEiJ_G0030034	Ddx47	93	86.256	Mus_spretus
ENSPMAG00000000186	-	100	86.967	ENSMPUG00000011726	DDX47	93	86.967	Mustela_putorius_furo
ENSPMAG00000000186	-	100	86.730	ENSMLUG00000003163	DDX47	93	86.730	Myotis_lucifugus
ENSPMAG00000000186	-	100	85.782	ENSNGAG00000020166	Ddx47	93	85.782	Nannospalax_galili
ENSPMAG00000000186	-	96	85.396	ENSNBRG00000001394	ddx47	88	84.928	Neolamprologus_brichardi
ENSPMAG00000000186	-	100	86.493	ENSNLEG00000003605	DDX47	93	86.493	Nomascus_leucogenys
ENSPMAG00000000186	-	92	76.093	ENSMEUG00000005930	DDX47	99	76.093	Notamacropus_eugenii
ENSPMAG00000000186	-	77	86.486	ENSOPRG00000014446	DDX47	72	86.486	Ochotona_princeps
ENSPMAG00000000186	-	100	86.019	ENSODEG00000012890	DDX47	92	86.019	Octodon_degus
ENSPMAG00000000186	-	99	85.167	ENSONIG00000008325	ddx47	93	85.167	Oreochromis_niloticus
ENSPMAG00000000186	-	63	86.245	ENSOANG00000003026	-	94	86.245	Ornithorhynchus_anatinus
ENSPMAG00000000186	-	100	86.256	ENSOCUG00000014390	DDX47	93	86.256	Oryctolagus_cuniculus
ENSPMAG00000000186	-	98	85.783	ENSORLG00000015021	ddx47	86	85.680	Oryzias_latipes
ENSPMAG00000000186	-	97	85.575	ENSORLG00020005546	ddx47	87	87.728	Oryzias_latipes_hni
ENSPMAG00000000186	-	97	85.819	ENSORLG00015017712	ddx47	86	85.919	Oryzias_latipes_hsok
ENSPMAG00000000186	-	98	85.783	ENSOMEG00000008065	ddx47	86	85.680	Oryzias_melastigma
ENSPMAG00000000186	-	100	82.938	ENSOGAG00000003748	DDX47	94	82.938	Otolemur_garnettii
ENSPMAG00000000186	-	100	86.256	ENSOARG00000020845	DDX47	90	86.256	Ovis_aries
ENSPMAG00000000186	-	100	86.493	ENSPPAG00000039793	DDX47	93	86.493	Pan_paniscus
ENSPMAG00000000186	-	100	86.730	ENSPPRG00000017561	DDX47	93	86.730	Panthera_pardus
ENSPMAG00000000186	-	100	86.730	ENSPTIG00000019604	DDX47	93	86.730	Panthera_tigris_altaica
ENSPMAG00000000186	-	100	86.493	ENSPTRG00000033743	DDX47	93	86.493	Pan_troglodytes
ENSPMAG00000000186	-	100	86.256	ENSPANG00000016430	DDX47	93	86.256	Papio_anubis
ENSPMAG00000000186	-	97	84.108	ENSPKIG00000006718	ddx47	83	86.423	Paramormyrops_kingsleyae
ENSPMAG00000000186	-	100	87.972	ENSPSIG00000006056	DDX47	93	87.972	Pelodiscus_sinensis
ENSPMAG00000000186	-	98	84.709	ENSPMGG00000009920	ddx47	87	84.689	Periophthalmus_magnuspinnatus
ENSPMAG00000000186	-	100	86.967	ENSPEMG00000009746	Ddx47	93	86.967	Peromyscus_maniculatus_bairdii
ENSPMAG00000000186	-	100	86.967	ENSPCIG00000029927	DDX47	92	86.967	Phascolarctos_cinereus
ENSPMAG00000000186	-	98	84.951	ENSPFOG00000003330	ddx47	84	84.928	Poecilia_formosa
ENSPMAG00000000186	-	91	80.157	ENSPLAG00000014318	ddx47	81	80.157	Poecilia_latipinna
ENSPMAG00000000186	-	98	84.951	ENSPMEG00000018616	ddx47	84	84.928	Poecilia_mexicana
ENSPMAG00000000186	-	98	85.024	ENSPREG00000015560	ddx47	88	83.333	Poecilia_reticulata
ENSPMAG00000000186	-	100	86.493	ENSPPYG00000004309	DDX47	93	86.493	Pongo_abelii
ENSPMAG00000000186	-	65	87.919	ENSPCAG00000013197	-	70	87.919	Procavia_capensis
ENSPMAG00000000186	-	100	86.256	ENSPCOG00000028218	DDX47	93	86.256	Propithecus_coquereli
ENSPMAG00000000186	-	100	83.412	ENSPVAG00000002640	DDX47	93	83.412	Pteropus_vampyrus
ENSPMAG00000000186	-	96	85.149	ENSPNYG00000020669	ddx47	87	84.689	Pundamilia_nyererei
ENSPMAG00000000186	-	98	84.337	ENSPNAG00000011435	ddx47	90	84.086	Pygocentrus_nattereri
ENSPMAG00000000186	-	100	86.493	ENSRNOG00000007838	Ddx47	93	86.493	Rattus_norvegicus
ENSPMAG00000000186	-	100	86.493	ENSRBIG00000026934	DDX47	93	86.493	Rhinopithecus_bieti
ENSPMAG00000000186	-	100	86.493	ENSRROG00000025014	DDX47	93	86.493	Rhinopithecus_roxellana
ENSPMAG00000000186	-	92	57.216	YHR065C	-	77	57.216	Saccharomyces_cerevisiae
ENSPMAG00000000186	-	100	86.730	ENSSBOG00000035866	DDX47	93	86.730	Saimiri_boliviensis_boliviensis
ENSPMAG00000000186	-	100	86.730	ENSSHAG00000010825	DDX47	82	86.730	Sarcophilus_harrisii
ENSPMAG00000000186	-	97	84.841	ENSSFOG00015013392	ddx47	89	84.964	Scleropages_formosus
ENSPMAG00000000186	-	97	85.819	ENSSMAG00000004179	ddx47	85	85.646	Scophthalmus_maximus
ENSPMAG00000000186	-	98	85.301	ENSSDUG00000018110	ddx47	80	85.167	Seriola_dumerili
ENSPMAG00000000186	-	97	85.575	ENSSLDG00000018142	ddx47	84	85.407	Seriola_lalandi_dorsalis
ENSPMAG00000000186	-	64	89.630	ENSSARG00000007535	DDX47	90	89.630	Sorex_araneus
ENSPMAG00000000186	-	100	88.863	ENSSPUG00000004958	DDX47	92	88.863	Sphenodon_punctatus
ENSPMAG00000000186	-	99	85.096	ENSSPAG00000016431	ddx47	84	85.167	Stegastes_partitus
ENSPMAG00000000186	-	100	86.019	ENSSSCG00000033149	DDX47	95	86.019	Sus_scrofa
ENSPMAG00000000186	-	98	88.780	ENSTGUG00000009385	DDX47	93	87.857	Taeniopygia_guttata
ENSPMAG00000000186	-	99	84.615	ENSTRUG00000021826	ddx47	89	84.689	Takifugu_rubripes
ENSPMAG00000000186	-	100	74.408	ENSTBEG00000013697	DDX47	93	74.408	Tupaia_belangeri
ENSPMAG00000000186	-	100	85.782	ENSTTRG00000015036	DDX47	93	85.782	Tursiops_truncatus
ENSPMAG00000000186	-	100	86.493	ENSUAMG00000016382	DDX47	98	88.710	Ursus_americanus
ENSPMAG00000000186	-	100	86.730	ENSUMAG00000002358	DDX47	91	88.739	Ursus_maritimus
ENSPMAG00000000186	-	84	68.661	ENSVPAG00000012483	-	100	68.661	Vicugna_pacos
ENSPMAG00000000186	-	98	86.747	ENSVVUG00000004697	DDX47	88	86.256	Vulpes_vulpes
ENSPMAG00000000186	-	100	88.571	ENSXETG00000022984	ddx47	94	88.571	Xenopus_tropicalis
ENSPMAG00000000186	-	98	85.680	ENSXCOG00000015880	ddx47	88	85.646	Xiphophorus_couchianus
ENSPMAG00000000186	-	98	85.437	ENSXMAG00000008268	ddx47	78	85.407	Xiphophorus_maculatus