EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000195 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 2760 bases
Position: chrGL485346:2779-5538
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000219	EXOSC1	PF10447.9	4.7e-15	1	1
ENSPMAP00000000219	ECR1_N	PF14382.6	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000219	-	588	-	ENSPMAP00000000219	195 (aa)	-	S4R4U0

Gene Model

Click here to download ENSPMAG00000000195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000195	exosc1	95	71.123	ENSG00000171311	EXOSC1	95	71.123	Homo_sapiens
ENSPMAG00000000195	exosc1	95	70.053	ENSAPOG00000007822	exosc1	96	70.053	Acanthochromis_polyacanthus
ENSPMAG00000000195	exosc1	95	71.123	ENSAMEG00000000129	EXOSC1	95	71.123	Ailuropoda_melanoleuca
ENSPMAG00000000195	exosc1	95	70.053	ENSACIG00000018956	exosc1	91	70.053	Amphilophus_citrinellus
ENSPMAG00000000195	exosc1	95	70.430	ENSAOCG00000010699	exosc1	95	70.430	Amphiprion_ocellaris
ENSPMAG00000000195	exosc1	92	60.000	ENSAPEG00000012690	exosc1	96	60.000	Amphiprion_percula
ENSPMAG00000000195	exosc1	95	71.505	ENSATEG00000018683	exosc1	95	71.505	Anabas_testudineus
ENSPMAG00000000195	exosc1	95	67.742	ENSACAG00000002101	EXOSC1	95	67.742	Anolis_carolinensis
ENSPMAG00000000195	exosc1	95	71.123	ENSANAG00000034669	EXOSC1	95	71.123	Aotus_nancymaae
ENSPMAG00000000195	exosc1	95	71.505	ENSACLG00000021243	exosc1	95	71.505	Astatotilapia_calliptera
ENSPMAG00000000195	exosc1	95	73.118	ENSAMXG00000011116	exosc1	95	73.118	Astyanax_mexicanus
ENSPMAG00000000195	exosc1	95	71.658	ENSBTAG00000012699	EXOSC1	95	71.658	Bos_taurus
ENSPMAG00000000195	exosc1	92	34.392	WBGene00012966	exos-1	90	34.392	Caenorhabditis_elegans
ENSPMAG00000000195	exosc1	95	70.588	ENSCJAG00000016586	EXOSC1	95	70.588	Callithrix_jacchus
ENSPMAG00000000195	exosc1	95	71.123	ENSCAFG00000009068	EXOSC1	90	71.123	Canis_familiaris
ENSPMAG00000000195	exosc1	95	71.123	ENSCAFG00020006002	EXOSC1	90	71.123	Canis_lupus_dingo
ENSPMAG00000000195	exosc1	95	71.658	ENSCHIG00000015253	EXOSC1	95	71.658	Capra_hircus
ENSPMAG00000000195	exosc1	95	70.588	ENSTSYG00000000760	EXOSC1	95	70.588	Carlito_syrichta
ENSPMAG00000000195	exosc1	95	71.658	ENSCPOG00000001173	EXOSC1	95	71.658	Cavia_porcellus
ENSPMAG00000000195	exosc1	95	43.617	ENSCCAG00000023986	EXOSC1	95	43.617	Cebus_capucinus
ENSPMAG00000000195	exosc1	95	71.123	ENSCATG00000034114	EXOSC1	95	71.123	Cercocebus_atys
ENSPMAG00000000195	exosc1	95	71.658	ENSCLAG00000002463	EXOSC1	95	71.658	Chinchilla_lanigera
ENSPMAG00000000195	exosc1	95	71.123	ENSCSAG00000005870	EXOSC1	95	71.123	Chlorocebus_sabaeus
ENSPMAG00000000195	exosc1	91	61.453	ENSCHOG00000006477	EXOSC1	95	61.453	Choloepus_hoffmanni
ENSPMAG00000000195	exosc1	55	63.551	ENSCPBG00000011949	EXOSC1	88	63.551	Chrysemys_picta_bellii
ENSPMAG00000000195	exosc1	94	52.174	ENSCING00000022734	-	88	52.174	Ciona_intestinalis
ENSPMAG00000000195	exosc1	94	54.891	ENSCSAVG00000010865	-	94	54.891	Ciona_savignyi
ENSPMAG00000000195	exosc1	95	71.123	ENSCANG00000034159	EXOSC1	95	71.123	Colobus_angolensis_palliatus
ENSPMAG00000000195	exosc1	95	70.588	ENSCGRG00001000335	Exosc1	95	70.588	Cricetulus_griseus_chok1gshd
ENSPMAG00000000195	exosc1	95	70.588	ENSCGRG00000011602	Exosc1	95	70.588	Cricetulus_griseus_crigri
ENSPMAG00000000195	exosc1	95	59.677	ENSCSEG00000007895	exosc1	91	59.677	Cynoglossus_semilaevis
ENSPMAG00000000195	exosc1	95	65.241	ENSCVAG00000016748	exosc1	96	65.241	Cyprinodon_variegatus
ENSPMAG00000000195	exosc1	95	71.505	ENSDARG00000059841	exosc1	95	71.505	Danio_rerio
ENSPMAG00000000195	exosc1	70	70.290	ENSDNOG00000007983	EXOSC1	93	70.290	Dasypus_novemcinctus
ENSPMAG00000000195	exosc1	95	71.123	ENSDORG00000016528	Exosc1	95	71.123	Dipodomys_ordii
ENSPMAG00000000195	exosc1	95	48.168	FBgn0032346	Csl4	92	48.168	Drosophila_melanogaster
ENSPMAG00000000195	exosc1	95	70.053	ENSETEG00000002469	-	95	70.053	Echinops_telfairi
ENSPMAG00000000195	exosc1	98	69.948	ENSEBUG00000008164	exosc1	97	69.948	Eptatretus_burgeri
ENSPMAG00000000195	exosc1	95	64.706	ENSEASG00005008684	EXOSC1	95	64.706	Equus_asinus_asinus
ENSPMAG00000000195	exosc1	85	42.604	ENSECAG00000010621	EXOSC1	94	42.604	Equus_caballus
ENSPMAG00000000195	exosc1	95	70.053	ENSEEUG00000005647	EXOSC1	95	70.053	Erinaceus_europaeus
ENSPMAG00000000195	exosc1	99	67.692	ENSELUG00000017369	exosc1	86	67.692	Esox_lucius
ENSPMAG00000000195	exosc1	95	71.123	ENSFCAG00000040563	EXOSC1	90	71.123	Felis_catus
ENSPMAG00000000195	exosc1	95	68.449	ENSFALG00000008450	EXOSC1	95	68.449	Ficedula_albicollis
ENSPMAG00000000195	exosc1	95	71.123	ENSFDAG00000000846	EXOSC1	95	71.123	Fukomys_damarensis
ENSPMAG00000000195	exosc1	95	65.775	ENSFHEG00000009154	exosc1	96	65.775	Fundulus_heteroclitus
ENSPMAG00000000195	exosc1	95	68.817	ENSGMOG00000008993	exosc1	95	68.817	Gadus_morhua
ENSPMAG00000000195	exosc1	95	61.497	ENSGALG00000039917	EXOSC1	100	71.233	Gallus_gallus
ENSPMAG00000000195	exosc1	95	65.241	ENSGAFG00000010265	exosc1	91	65.241	Gambusia_affinis
ENSPMAG00000000195	exosc1	95	70.430	ENSGACG00000018936	exosc1	95	70.430	Gasterosteus_aculeatus
ENSPMAG00000000195	exosc1	95	70.053	ENSGAGG00000019192	EXOSC1	95	70.053	Gopherus_agassizii
ENSPMAG00000000195	exosc1	95	63.102	ENSGGOG00000003099	EXOSC1	95	63.102	Gorilla_gorilla
ENSPMAG00000000195	exosc1	95	71.505	ENSHBUG00000017857	exosc1	96	71.351	Haplochromis_burtoni
ENSPMAG00000000195	exosc1	95	71.123	ENSHGLG00000016927	EXOSC1	95	71.123	Heterocephalus_glaber_female
ENSPMAG00000000195	exosc1	95	71.123	ENSHGLG00100012208	EXOSC1	95	71.123	Heterocephalus_glaber_male
ENSPMAG00000000195	exosc1	95	68.280	ENSHCOG00000019882	exosc1	95	68.280	Hippocampus_comes
ENSPMAG00000000195	exosc1	95	71.505	ENSIPUG00000007685	exosc1	95	71.505	Ictalurus_punctatus
ENSPMAG00000000195	exosc1	58	57.895	ENSSTOG00000029860	-	86	57.895	Ictidomys_tridecemlineatus
ENSPMAG00000000195	exosc1	95	71.123	ENSSTOG00000006615	EXOSC1	95	71.123	Ictidomys_tridecemlineatus
ENSPMAG00000000195	exosc1	95	71.123	ENSJJAG00000013311	Exosc1	95	71.123	Jaculus_jaculus
ENSPMAG00000000195	exosc1	95	68.449	ENSKMAG00000001202	exosc1	78	68.449	Kryptolebias_marmoratus
ENSPMAG00000000195	exosc1	95	70.430	ENSLBEG00000011448	exosc1	95	70.430	Labrus_bergylta
ENSPMAG00000000195	exosc1	95	52.332	ENSLOCG00000003776	exosc1	95	52.332	Lepisosteus_oculatus
ENSPMAG00000000195	exosc1	95	70.588	ENSLAFG00000015983	EXOSC1	95	70.588	Loxodonta_africana
ENSPMAG00000000195	exosc1	95	71.123	ENSMFAG00000001493	EXOSC1	95	71.123	Macaca_fascicularis
ENSPMAG00000000195	exosc1	95	71.123	ENSMMUG00000020028	EXOSC1	95	64.398	Macaca_mulatta
ENSPMAG00000000195	exosc1	95	71.123	ENSMNEG00000029816	EXOSC1	95	71.123	Macaca_nemestrina
ENSPMAG00000000195	exosc1	95	65.241	ENSMLEG00000027643	EXOSC1	95	65.241	Mandrillus_leucophaeus
ENSPMAG00000000195	exosc1	95	70.053	ENSMAMG00000012200	exosc1	96	70.053	Mastacembelus_armatus
ENSPMAG00000000195	exosc1	95	71.505	ENSMZEG00005007042	exosc1	95	71.505	Maylandia_zebra
ENSPMAG00000000195	exosc1	95	63.102	ENSMAUG00000020462	-	95	63.102	Mesocricetus_auratus
ENSPMAG00000000195	exosc1	95	71.123	ENSMICG00000007664	EXOSC1	88	71.123	Microcebus_murinus
ENSPMAG00000000195	exosc1	94	65.946	ENSMOCG00000017124	-	94	65.946	Microtus_ochrogaster
ENSPMAG00000000195	exosc1	95	70.588	ENSMOCG00000006004	-	95	70.588	Microtus_ochrogaster
ENSPMAG00000000195	exosc1	94	52.174	ENSMMOG00000021403	exosc1	95	52.174	Mola_mola
ENSPMAG00000000195	exosc1	95	70.745	ENSMODG00000004213	EXOSC1	95	70.745	Monodelphis_domestica
ENSPMAG00000000195	exosc1	96	68.617	ENSMALG00000007061	exosc1	94	68.617	Monopterus_albus
ENSPMAG00000000195	exosc1	95	70.053	MGP_CAROLIEiJ_G0022959	Exosc1	95	70.053	Mus_caroli
ENSPMAG00000000195	exosc1	95	70.053	ENSMUSG00000034321	Exosc1	95	70.053	Mus_musculus
ENSPMAG00000000195	exosc1	95	70.588	MGP_PahariEiJ_G0014449	Exosc1	95	70.588	Mus_pahari
ENSPMAG00000000195	exosc1	95	70.053	MGP_SPRETEiJ_G0023880	Exosc1	95	70.053	Mus_spretus
ENSPMAG00000000195	exosc1	95	71.123	ENSMPUG00000017044	EXOSC1	95	71.123	Mustela_putorius_furo
ENSPMAG00000000195	exosc1	95	71.123	ENSMLUG00000009228	EXOSC1	95	71.123	Myotis_lucifugus
ENSPMAG00000000195	exosc1	95	69.519	ENSNGAG00000022033	Exosc1	95	69.519	Nannospalax_galili
ENSPMAG00000000195	exosc1	95	53.476	ENSNBRG00000024007	exosc1	94	53.476	Neolamprologus_brichardi
ENSPMAG00000000195	exosc1	95	70.588	ENSNLEG00000013872	EXOSC1	95	70.588	Nomascus_leucogenys
ENSPMAG00000000195	exosc1	55	66.355	ENSMEUG00000002246	EXOSC1	92	66.355	Notamacropus_eugenii
ENSPMAG00000000195	exosc1	95	71.123	ENSOPRG00000005065	EXOSC1	95	71.123	Ochotona_princeps
ENSPMAG00000000195	exosc1	95	71.658	ENSODEG00000016709	EXOSC1	95	71.658	Octodon_degus
ENSPMAG00000000195	exosc1	95	70.430	ENSONIG00000017683	exosc1	95	70.430	Oreochromis_niloticus
ENSPMAG00000000195	exosc1	58	80.000	ENSOANG00000006563	EXOSC1	98	77.419	Ornithorhynchus_anatinus
ENSPMAG00000000195	exosc1	95	66.845	ENSOCUG00000026461	-	95	66.845	Oryctolagus_cuniculus
ENSPMAG00000000195	exosc1	95	70.745	ENSOCUG00000011898	-	95	70.745	Oryctolagus_cuniculus
ENSPMAG00000000195	exosc1	95	67.380	ENSORLG00000011595	exosc1	95	67.380	Oryzias_latipes
ENSPMAG00000000195	exosc1	95	67.380	ENSORLG00020005831	exosc1	95	67.380	Oryzias_latipes_hni
ENSPMAG00000000195	exosc1	95	67.380	ENSORLG00015004317	exosc1	95	67.380	Oryzias_latipes_hsok
ENSPMAG00000000195	exosc1	95	54.839	ENSOMEG00000013907	exosc1	94	54.839	Oryzias_melastigma
ENSPMAG00000000195	exosc1	95	71.658	ENSOGAG00000016259	EXOSC1	95	71.658	Otolemur_garnettii
ENSPMAG00000000195	exosc1	95	71.658	ENSOARG00000010136	EXOSC1	95	71.658	Ovis_aries
ENSPMAG00000000195	exosc1	95	65.079	ENSPPAG00000039842	EXOSC1	95	65.079	Pan_paniscus
ENSPMAG00000000195	exosc1	95	71.123	ENSPPRG00000023366	EXOSC1	95	71.123	Panthera_pardus
ENSPMAG00000000195	exosc1	95	71.123	ENSPTIG00000017701	EXOSC1	95	71.123	Panthera_tigris_altaica
ENSPMAG00000000195	exosc1	95	71.123	ENSPTRG00000002808	EXOSC1	95	71.123	Pan_troglodytes
ENSPMAG00000000195	exosc1	95	71.123	ENSPANG00000021324	EXOSC1	95	71.123	Papio_anubis
ENSPMAG00000000195	exosc1	95	69.892	ENSPKIG00000016037	exosc1	95	69.892	Paramormyrops_kingsleyae
ENSPMAG00000000195	exosc1	91	59.043	ENSPSIG00000013571	EXOSC1	98	70.492	Pelodiscus_sinensis
ENSPMAG00000000195	exosc1	95	60.215	ENSPMGG00000014002	exosc1	95	60.215	Periophthalmus_magnuspinnatus
ENSPMAG00000000195	exosc1	95	70.588	ENSPEMG00000010710	-	95	70.588	Peromyscus_maniculatus_bairdii
ENSPMAG00000000195	exosc1	95	70.588	ENSPCIG00000002210	EXOSC1	94	70.588	Phascolarctos_cinereus
ENSPMAG00000000195	exosc1	95	65.241	ENSPFOG00000006755	exosc1	91	65.241	Poecilia_formosa
ENSPMAG00000000195	exosc1	95	65.241	ENSPLAG00000005880	exosc1	96	65.241	Poecilia_latipinna
ENSPMAG00000000195	exosc1	95	65.241	ENSPMEG00000015598	exosc1	91	65.241	Poecilia_mexicana
ENSPMAG00000000195	exosc1	95	60.428	ENSPREG00000000405	exosc1	90	60.428	Poecilia_reticulata
ENSPMAG00000000195	exosc1	95	71.123	ENSPPYG00000002531	EXOSC1	95	71.123	Pongo_abelii
ENSPMAG00000000195	exosc1	95	70.588	ENSPCAG00000009135	EXOSC1	95	70.588	Procavia_capensis
ENSPMAG00000000195	exosc1	95	64.706	ENSPCOG00000027539	EXOSC1	95	64.706	Propithecus_coquereli
ENSPMAG00000000195	exosc1	95	71.123	ENSPVAG00000003372	EXOSC1	95	71.123	Pteropus_vampyrus
ENSPMAG00000000195	exosc1	95	71.505	ENSPNYG00000021745	exosc1	95	71.505	Pundamilia_nyererei
ENSPMAG00000000195	exosc1	95	73.118	ENSPNAG00000001944	exosc1	95	73.118	Pygocentrus_nattereri
ENSPMAG00000000195	exosc1	95	70.588	ENSRNOG00000048708	Exosc1	95	70.588	Rattus_norvegicus
ENSPMAG00000000195	exosc1	95	71.123	ENSRBIG00000035618	EXOSC1	95	71.123	Rhinopithecus_bieti
ENSPMAG00000000195	exosc1	95	71.123	ENSRROG00000032589	EXOSC1	88	71.123	Rhinopithecus_roxellana
ENSPMAG00000000195	exosc1	95	71.123	ENSSBOG00000000359	EXOSC1	95	71.123	Saimiri_boliviensis_boliviensis
ENSPMAG00000000195	exosc1	74	73.469	ENSSHAG00000018219	EXOSC1	100	73.469	Sarcophilus_harrisii
ENSPMAG00000000195	exosc1	97	69.634	ENSSFOG00015009069	exosc1	96	70.588	Scleropages_formosus
ENSPMAG00000000195	exosc1	95	68.449	ENSSFOG00015016289	-	96	68.449	Scleropages_formosus
ENSPMAG00000000195	exosc1	95	69.892	ENSSMAG00000003721	exosc1	95	69.892	Scophthalmus_maximus
ENSPMAG00000000195	exosc1	95	69.355	ENSSDUG00000002993	exosc1	95	69.355	Seriola_dumerili
ENSPMAG00000000195	exosc1	95	69.355	ENSSLDG00000025181	exosc1	95	69.355	Seriola_lalandi_dorsalis
ENSPMAG00000000195	exosc1	95	63.102	ENSSARG00000000162	EXOSC1	95	63.102	Sorex_araneus
ENSPMAG00000000195	exosc1	95	67.204	ENSSPUG00000012263	EXOSC1	95	67.204	Sphenodon_punctatus
ENSPMAG00000000195	exosc1	95	62.032	ENSSPAG00000016792	exosc1	79	62.032	Stegastes_partitus
ENSPMAG00000000195	exosc1	95	71.123	ENSSSCG00000010518	EXOSC1	87	71.123	Sus_scrofa
ENSPMAG00000000195	exosc1	97	68.063	ENSTGUG00000009692	EXOSC1	97	68.063	Taeniopygia_guttata
ENSPMAG00000000195	exosc1	95	65.054	ENSTRUG00000007706	exosc1	96	65.054	Takifugu_rubripes
ENSPMAG00000000195	exosc1	95	64.211	ENSTNIG00000014079	exosc1	95	64.211	Tetraodon_nigroviridis
ENSPMAG00000000195	exosc1	95	66.845	ENSTBEG00000006011	EXOSC1	95	66.845	Tupaia_belangeri
ENSPMAG00000000195	exosc1	94	70.811	ENSTTRG00000009887	EXOSC1	100	70.811	Tursiops_truncatus
ENSPMAG00000000195	exosc1	95	56.150	ENSUAMG00000010266	EXOSC1	95	56.150	Ursus_americanus
ENSPMAG00000000195	exosc1	95	56.150	ENSUMAG00000022002	EXOSC1	95	56.150	Ursus_maritimus
ENSPMAG00000000195	exosc1	95	71.123	ENSVVUG00000023192	EXOSC1	60	71.123	Vulpes_vulpes
ENSPMAG00000000195	exosc1	95	69.519	ENSXETG00000003434	exosc1	96	69.519	Xenopus_tropicalis
ENSPMAG00000000195	exosc1	64	73.016	ENSXCOG00000014499	exosc1	94	73.016	Xiphophorus_couchianus
ENSPMAG00000000195	exosc1	95	60.428	ENSXMAG00000023382	exosc1	90	60.428	Xiphophorus_maculatus