EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000204 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: -
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 15729 bases
Position: chrGL479456:16459-32187
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000231	PRP4	PF08799.11	9.9e-12	1	1
ENSPMAP00000000231	Prp18	PF02840.15	1.1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000231	-	1046	-	ENSPMAP00000000231	344 (aa)	-	S4R4V1

Gene Model

Click here to download ENSPMAG00000000204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000204	prpf18	100	74.277	ENSG00000165630	PRPF18	100	74.277	Homo_sapiens
ENSPMAG00000000204	prpf18	100	74.640	ENSAPOG00000024177	prpf18	100	74.640	Acanthochromis_polyacanthus
ENSPMAG00000000204	prpf18	100	74.566	ENSAMEG00000013591	-	100	74.566	Ailuropoda_melanoleuca
ENSPMAG00000000204	prpf18	100	74.928	ENSACIG00000001186	prpf18	100	74.928	Amphilophus_citrinellus
ENSPMAG00000000204	prpf18	98	74.706	ENSAOCG00000006572	prpf18	94	74.561	Amphiprion_ocellaris
ENSPMAG00000000204	prpf18	100	74.928	ENSAPEG00000004564	prpf18	100	74.928	Amphiprion_percula
ENSPMAG00000000204	prpf18	100	73.775	ENSATEG00000000303	prpf18	100	73.775	Anabas_testudineus
ENSPMAG00000000204	prpf18	99	73.547	ENSAPLG00000003387	-	99	73.547	Anas_platyrhynchos
ENSPMAG00000000204	prpf18	100	73.775	ENSACAG00000000818	-	100	73.775	Anolis_carolinensis
ENSPMAG00000000204	prpf18	100	74.566	ENSANAG00000037445	-	100	74.566	Aotus_nancymaae
ENSPMAG00000000204	prpf18	100	73.623	ENSACLG00000026296	prpf18	100	73.623	Astatotilapia_calliptera
ENSPMAG00000000204	prpf18	100	74.571	ENSAMXG00000012848	prpf18	100	74.571	Astyanax_mexicanus
ENSPMAG00000000204	prpf18	100	74.566	ENSBTAG00000017244	PRPF18	100	74.566	Bos_taurus
ENSPMAG00000000204	prpf18	99	36.915	WBGene00009320	F32B6.3	99	36.915	Caenorhabditis_elegans
ENSPMAG00000000204	prpf18	100	74.566	ENSCJAG00000009432	-	100	74.566	Callithrix_jacchus
ENSPMAG00000000204	prpf18	100	74.566	ENSCAFG00000004735	-	100	74.566	Canis_familiaris
ENSPMAG00000000204	prpf18	100	74.566	ENSCAFG00020007712	-	100	74.566	Canis_lupus_dingo
ENSPMAG00000000204	prpf18	100	74.566	ENSCHIG00000000499	-	100	74.566	Capra_hircus
ENSPMAG00000000204	prpf18	100	73.988	ENSTSYG00000003517	-	100	73.988	Carlito_syrichta
ENSPMAG00000000204	prpf18	100	74.277	ENSCPOG00000021069	-	100	74.277	Cavia_porcellus
ENSPMAG00000000204	prpf18	100	74.566	ENSCCAG00000036822	-	100	74.566	Cebus_capucinus
ENSPMAG00000000204	prpf18	100	64.740	ENSCATG00000016633	-	100	64.740	Cercocebus_atys
ENSPMAG00000000204	prpf18	100	73.988	ENSCLAG00000011770	-	100	73.988	Chinchilla_lanigera
ENSPMAG00000000204	prpf18	100	72.934	ENSCSAG00000013109	-	100	72.934	Chlorocebus_sabaeus
ENSPMAG00000000204	prpf18	100	71.944	ENSCPBG00000003100	-	100	72.222	Chrysemys_picta_bellii
ENSPMAG00000000204	prpf18	99	57.184	ENSCING00000020481	-	99	57.184	Ciona_intestinalis
ENSPMAG00000000204	prpf18	99	57.143	ENSCSAVG00000010546	-	99	57.143	Ciona_savignyi
ENSPMAG00000000204	prpf18	100	74.277	ENSCANG00000034900	-	100	74.277	Colobus_angolensis_palliatus
ENSPMAG00000000204	prpf18	100	74.277	ENSCGRG00001023665	Prpf18	100	74.277	Cricetulus_griseus_chok1gshd
ENSPMAG00000000204	prpf18	100	74.277	ENSCGRG00000014690	Prpf18	100	74.277	Cricetulus_griseus_crigri
ENSPMAG00000000204	prpf18	100	72.911	ENSCSEG00000005536	prpf18	99	72.911	Cynoglossus_semilaevis
ENSPMAG00000000204	prpf18	100	73.429	ENSCVAG00000012401	prpf18	100	73.429	Cyprinodon_variegatus
ENSPMAG00000000204	prpf18	100	74.640	ENSDARG00000058306	prpf18	100	74.640	Danio_rerio
ENSPMAG00000000204	prpf18	100	73.988	ENSDNOG00000035607	-	100	73.988	Dasypus_novemcinctus
ENSPMAG00000000204	prpf18	100	74.277	ENSDORG00000000858	Prpf18	100	74.277	Dipodomys_ordii
ENSPMAG00000000204	prpf18	99	50.585	FBgn0027784	Prp18	98	50.585	Drosophila_melanogaster
ENSPMAG00000000204	prpf18	100	65.029	ENSETEG00000015060	-	100	65.029	Echinops_telfairi
ENSPMAG00000000204	prpf18	100	68.786	ENSEBUG00000016502	prpf18	99	68.786	Eptatretus_burgeri
ENSPMAG00000000204	prpf18	100	74.566	ENSEASG00005019373	-	100	74.566	Equus_asinus_asinus
ENSPMAG00000000204	prpf18	100	74.566	ENSECAG00000006997	PRPF18	100	74.566	Equus_caballus
ENSPMAG00000000204	prpf18	92	48.750	ENSEEUG00000001171	-	100	48.750	Erinaceus_europaeus
ENSPMAG00000000204	prpf18	100	72.727	ENSELUG00000022190	prpf18	100	72.727	Esox_lucius
ENSPMAG00000000204	prpf18	100	74.566	ENSFCAG00000004436	-	100	74.566	Felis_catus
ENSPMAG00000000204	prpf18	92	73.538	ENSFALG00000001912	-	97	73.846	Ficedula_albicollis
ENSPMAG00000000204	prpf18	93	75.542	ENSFDAG00000014026	-	99	75.542	Fukomys_damarensis
ENSPMAG00000000204	prpf18	99	50.872	ENSFDAG00000010713	-	97	50.872	Fukomys_damarensis
ENSPMAG00000000204	prpf18	79	79.121	ENSFHEG00000020125	prpf18	100	79.121	Fundulus_heteroclitus
ENSPMAG00000000204	prpf18	99	74.709	ENSGMOG00000012210	prpf18	99	74.709	Gadus_morhua
ENSPMAG00000000204	prpf18	100	74.277	ENSGALG00000043593	-	100	74.277	Gallus_gallus
ENSPMAG00000000204	prpf18	100	73.199	ENSGAFG00000006034	prpf18	100	73.199	Gambusia_affinis
ENSPMAG00000000204	prpf18	100	72.911	ENSGACG00000012232	prpf18	100	72.911	Gasterosteus_aculeatus
ENSPMAG00000000204	prpf18	100	74.277	ENSGAGG00000016878	-	100	74.277	Gopherus_agassizii
ENSPMAG00000000204	prpf18	92	74.375	ENSGGOG00000025188	-	96	74.375	Gorilla_gorilla
ENSPMAG00000000204	prpf18	100	74.000	ENSHBUG00000010264	prpf18	100	74.000	Haplochromis_burtoni
ENSPMAG00000000204	prpf18	100	74.566	ENSHGLG00000018534	PRPF18	100	74.566	Heterocephalus_glaber_female
ENSPMAG00000000204	prpf18	93	75.542	ENSHGLG00100012161	-	98	75.542	Heterocephalus_glaber_male
ENSPMAG00000000204	prpf18	100	73.429	ENSHCOG00000015987	prpf18	100	73.429	Hippocampus_comes
ENSPMAG00000000204	prpf18	100	71.671	ENSIPUG00000007432	prpf18	100	73.938	Ictalurus_punctatus
ENSPMAG00000000204	prpf18	100	73.121	ENSSTOG00000008735	-	100	73.121	Ictidomys_tridecemlineatus
ENSPMAG00000000204	prpf18	100	55.331	ENSJJAG00000015191	-	100	55.331	Jaculus_jaculus
ENSPMAG00000000204	prpf18	100	74.277	ENSJJAG00000024041	-	100	74.277	Jaculus_jaculus
ENSPMAG00000000204	prpf18	100	72.286	ENSKMAG00000012124	prpf18	100	72.286	Kryptolebias_marmoratus
ENSPMAG00000000204	prpf18	98	71.681	ENSLBEG00000028466	prpf18	98	71.681	Labrus_bergylta
ENSPMAG00000000204	prpf18	100	71.014	ENSLACG00000009885	prpf18	100	71.304	Latimeria_chalumnae
ENSPMAG00000000204	prpf18	100	74.928	ENSLOCG00000016736	prpf18	100	74.928	Lepisosteus_oculatus
ENSPMAG00000000204	prpf18	100	74.277	ENSLAFG00000007753	-	100	74.277	Loxodonta_africana
ENSPMAG00000000204	prpf18	100	74.277	ENSMFAG00000000540	-	100	74.277	Macaca_fascicularis
ENSPMAG00000000204	prpf18	100	74.277	ENSMMUG00000015071	PRPF18	96	80.892	Macaca_mulatta
ENSPMAG00000000204	prpf18	100	74.277	ENSMNEG00000024679	-	100	74.277	Macaca_nemestrina
ENSPMAG00000000204	prpf18	100	59.538	ENSMLEG00000031715	-	100	59.538	Mandrillus_leucophaeus
ENSPMAG00000000204	prpf18	100	74.063	ENSMAMG00000006610	prpf18	100	74.063	Mastacembelus_armatus
ENSPMAG00000000204	prpf18	100	74.000	ENSMZEG00005019392	prpf18	100	74.000	Maylandia_zebra
ENSPMAG00000000204	prpf18	100	74.277	ENSMGAG00000005023	-	100	74.277	Meleagris_gallopavo
ENSPMAG00000000204	prpf18	100	74.566	ENSMICG00000006572	-	100	74.566	Microcebus_murinus
ENSPMAG00000000204	prpf18	100	74.277	ENSMOCG00000021468	Prpf18	100	74.277	Microtus_ochrogaster
ENSPMAG00000000204	prpf18	100	73.487	ENSMMOG00000013012	prpf18	100	73.487	Mola_mola
ENSPMAG00000000204	prpf18	100	68.786	ENSMODG00000024043	-	100	68.786	Monodelphis_domestica
ENSPMAG00000000204	prpf18	92	72.923	ENSMODG00000016902	-	91	72.923	Monodelphis_domestica
ENSPMAG00000000204	prpf18	100	68.406	ENSMALG00000005486	prpf18	100	68.696	Monopterus_albus
ENSPMAG00000000204	prpf18	100	74.566	MGP_CAROLIEiJ_G0023143	Prpf18	97	84.507	Mus_caroli
ENSPMAG00000000204	prpf18	100	74.277	ENSMUSG00000039449	Prpf18	97	84.507	Mus_musculus
ENSPMAG00000000204	prpf18	100	74.566	MGP_PahariEiJ_G0019203	Prpf18	97	84.507	Mus_pahari
ENSPMAG00000000204	prpf18	100	73.988	MGP_SPRETEiJ_G0024061	Prpf18	97	84.507	Mus_spretus
ENSPMAG00000000204	prpf18	100	74.277	ENSMPUG00000000938	-	100	74.277	Mustela_putorius_furo
ENSPMAG00000000204	prpf18	100	74.855	ENSMLUG00000009200	-	100	74.855	Myotis_lucifugus
ENSPMAG00000000204	prpf18	67	72.609	ENSNGAG00000023550	-	83	71.983	Nannospalax_galili
ENSPMAG00000000204	prpf18	100	74.277	ENSNGAG00000012500	-	100	74.277	Nannospalax_galili
ENSPMAG00000000204	prpf18	100	74.063	ENSNBRG00000001778	prpf18	100	74.063	Neolamprologus_brichardi
ENSPMAG00000000204	prpf18	100	74.277	ENSNLEG00000012186	-	100	74.277	Nomascus_leucogenys
ENSPMAG00000000204	prpf18	75	62.934	ENSMEUG00000005032	-	75	62.934	Notamacropus_eugenii
ENSPMAG00000000204	prpf18	78	56.134	ENSOPRG00000002153	-	100	56.134	Ochotona_princeps
ENSPMAG00000000204	prpf18	100	74.566	ENSODEG00000003770	-	100	74.566	Octodon_degus
ENSPMAG00000000204	prpf18	98	73.964	ENSONIG00000014854	prpf18	96	73.964	Oreochromis_niloticus
ENSPMAG00000000204	prpf18	100	72.832	ENSOANG00000015404	-	100	72.832	Ornithorhynchus_anatinus
ENSPMAG00000000204	prpf18	100	74.277	ENSOCUG00000027756	-	96	74.320	Oryctolagus_cuniculus
ENSPMAG00000000204	prpf18	100	73.714	ENSORLG00000010293	prpf18	100	73.714	Oryzias_latipes
ENSPMAG00000000204	prpf18	100	73.775	ENSORLG00020001530	prpf18	100	73.775	Oryzias_latipes_hni
ENSPMAG00000000204	prpf18	100	73.775	ENSORLG00015013705	prpf18	100	73.775	Oryzias_latipes_hsok
ENSPMAG00000000204	prpf18	100	74.640	ENSOMEG00000009167	prpf18	100	74.640	Oryzias_melastigma
ENSPMAG00000000204	prpf18	100	73.410	ENSOGAG00000007294	-	100	73.410	Otolemur_garnettii
ENSPMAG00000000204	prpf18	100	73.219	ENSOARG00000006243	-	100	73.219	Ovis_aries
ENSPMAG00000000204	prpf18	100	74.277	ENSPPAG00000041959	-	100	74.277	Pan_paniscus
ENSPMAG00000000204	prpf18	100	74.566	ENSPPRG00000000107	-	100	74.566	Panthera_pardus
ENSPMAG00000000204	prpf18	100	74.566	ENSPTIG00000021094	-	100	74.566	Panthera_tigris_altaica
ENSPMAG00000000204	prpf18	100	74.277	ENSPTRG00000002306	PRPF18	100	74.277	Pan_troglodytes
ENSPMAG00000000204	prpf18	100	74.566	ENSPANG00000023346	-	100	74.566	Papio_anubis
ENSPMAG00000000204	prpf18	100	74.074	ENSPKIG00000014128	prpf18	96	74.074	Paramormyrops_kingsleyae
ENSPMAG00000000204	prpf18	100	74.566	ENSPSIG00000016064	-	100	74.566	Pelodiscus_sinensis
ENSPMAG00000000204	prpf18	100	69.540	ENSPMGG00000016486	prpf18	100	69.540	Periophthalmus_magnuspinnatus
ENSPMAG00000000204	prpf18	100	74.277	ENSPEMG00000013704	Prpf18	100	74.277	Peromyscus_maniculatus_bairdii
ENSPMAG00000000204	prpf18	94	73.148	ENSPCIG00000012963	-	100	73.148	Phascolarctos_cinereus
ENSPMAG00000000204	prpf18	100	73.429	ENSPFOG00000017611	prpf18	100	73.429	Poecilia_formosa
ENSPMAG00000000204	prpf18	100	73.487	ENSPLAG00000000369	prpf18	100	73.487	Poecilia_latipinna
ENSPMAG00000000204	prpf18	100	73.714	ENSPMEG00000005183	prpf18	100	73.775	Poecilia_mexicana
ENSPMAG00000000204	prpf18	100	72.754	ENSPREG00000015232	prpf18	100	72.754	Poecilia_reticulata
ENSPMAG00000000204	prpf18	100	73.988	ENSPPYG00000002101	PRPF18	100	73.988	Pongo_abelii
ENSPMAG00000000204	prpf18	100	58.960	ENSPCAG00000010833	-	100	58.960	Procavia_capensis
ENSPMAG00000000204	prpf18	100	68.786	ENSPCOG00000013057	-	100	68.786	Propithecus_coquereli
ENSPMAG00000000204	prpf18	100	44.509	ENSPVAG00000002947	-	100	44.509	Pteropus_vampyrus
ENSPMAG00000000204	prpf18	100	74.286	ENSPNYG00000003554	prpf18	100	74.286	Pundamilia_nyererei
ENSPMAG00000000204	prpf18	100	73.504	ENSPNAG00000023151	prpf18	100	73.504	Pygocentrus_nattereri
ENSPMAG00000000204	prpf18	100	74.277	ENSRNOG00000018396	Prpf18	100	74.277	Rattus_norvegicus
ENSPMAG00000000204	prpf18	100	74.566	ENSRBIG00000028028	-	100	74.566	Rhinopithecus_bieti
ENSPMAG00000000204	prpf18	100	74.277	ENSRROG00000040695	-	100	74.277	Rhinopithecus_roxellana
ENSPMAG00000000204	prpf18	100	74.566	ENSSBOG00000034482	-	100	74.566	Saimiri_boliviensis_boliviensis
ENSPMAG00000000204	prpf18	100	63.663	ENSSHAG00000009669	-	100	63.663	Sarcophilus_harrisii
ENSPMAG00000000204	prpf18	100	73.410	ENSSHAG00000016463	-	100	73.410	Sarcophilus_harrisii
ENSPMAG00000000204	prpf18	98	72.174	ENSSFOG00015022118	prpf18	100	67.429	Scleropages_formosus
ENSPMAG00000000204	prpf18	67	46.552	ENSSFOG00015021154	-	89	46.552	Scleropages_formosus
ENSPMAG00000000204	prpf18	100	72.622	ENSSMAG00000005308	prpf18	100	72.622	Scophthalmus_maximus
ENSPMAG00000000204	prpf18	100	74.063	ENSSDUG00000015428	prpf18	100	74.063	Seriola_dumerili
ENSPMAG00000000204	prpf18	100	73.775	ENSSLDG00000023989	prpf18	100	73.775	Seriola_lalandi_dorsalis
ENSPMAG00000000204	prpf18	100	48.696	ENSSARG00000005307	-	100	48.696	Sorex_araneus
ENSPMAG00000000204	prpf18	100	74.138	ENSSPUG00000002619	-	100	74.138	Sphenodon_punctatus
ENSPMAG00000000204	prpf18	100	74.063	ENSSPAG00000019502	prpf18	100	74.063	Stegastes_partitus
ENSPMAG00000000204	prpf18	100	74.566	ENSSSCG00000026354	-	100	74.566	Sus_scrofa
ENSPMAG00000000204	prpf18	100	74.566	ENSTGUG00000002286	-	100	74.566	Taeniopygia_guttata
ENSPMAG00000000204	prpf18	100	73.487	ENSTRUG00000011278	prpf18	100	73.487	Takifugu_rubripes
ENSPMAG00000000204	prpf18	100	73.199	ENSTNIG00000000911	prpf18	100	73.199	Tetraodon_nigroviridis
ENSPMAG00000000204	prpf18	79	89.744	ENSTBEG00000013011	-	79	89.744	Tupaia_belangeri
ENSPMAG00000000204	prpf18	100	74.566	ENSTTRG00000011117	PRPF18	100	74.566	Tursiops_truncatus
ENSPMAG00000000204	prpf18	91	75.556	ENSUAMG00000001815	-	93	75.556	Ursus_americanus
ENSPMAG00000000204	prpf18	100	71.387	ENSUMAG00000012329	-	100	71.387	Ursus_maritimus
ENSPMAG00000000204	prpf18	100	69.364	ENSVPAG00000011486	-	100	69.364	Vicugna_pacos
ENSPMAG00000000204	prpf18	100	74.566	ENSVVUG00000005453	-	100	74.566	Vulpes_vulpes
ENSPMAG00000000204	prpf18	100	71.633	ENSXETG00000024057	prpf18	100	71.633	Xenopus_tropicalis
ENSPMAG00000000204	prpf18	100	72.779	ENSXCOG00000020414	prpf18	100	72.779	Xiphophorus_couchianus
ENSPMAG00000000204	prpf18	100	73.199	ENSXMAG00000004713	prpf18	91	73.199	Xiphophorus_maculatus