EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5921 bases
Position: chrGL479126:30633-36553
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000279	KH_1	PF00013.29	4e-44	1	3
ENSPMAP00000000279	KH_1	PF00013.29	4e-44	2	3
ENSPMAP00000000279	KH_1	PF00013.29	4e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000279	-	1275	-	ENSPMAP00000000279	305 (aa)	-	S4R4Z9

Gene Model

Click here to download ENSPMAG00000000249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000249	-	85	32.883	ENSPMAG00000002131	hdlbpb	82	33.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000249	-	99	64.650	ENSAPOG00000006904	hdlbpb	92	64.570	Acanthochromis_polyacanthus
ENSPMAG00000000249	-	99	66.447	ENSACIG00000016154	hdlbpb	90	66.438	Amphilophus_citrinellus
ENSPMAG00000000249	-	99	66.447	ENSAOCG00000004083	hdlbpb	93	66.438	Amphiprion_ocellaris
ENSPMAG00000000249	-	99	64.968	ENSAPEG00000012270	hdlbpb	92	64.901	Amphiprion_percula
ENSPMAG00000000249	-	99	67.763	ENSATEG00000019877	hdlbpb	93	67.808	Anabas_testudineus
ENSPMAG00000000249	-	99	70.492	ENSACAG00000003606	-	92	70.648	Anolis_carolinensis
ENSPMAG00000000249	-	99	66.225	ENSACLG00000006618	hdlbpb	92	66.438	Astatotilapia_calliptera
ENSPMAG00000000249	-	99	66.559	ENSAMXG00000019946	hdlbpb	86	66.221	Astyanax_mexicanus
ENSPMAG00000000249	-	99	63.259	ENSCSEG00000000955	hdlbpb	100	63.455	Cynoglossus_semilaevis
ENSPMAG00000000249	-	99	64.744	ENSCVAG00000005345	hdlbpb	92	64.901	Cyprinodon_variegatus
ENSPMAG00000000249	-	99	63.754	ENSDARG00000061864	hdlbpb	88	64.214	Danio_rerio
ENSPMAG00000000249	-	86	64.865	ENSEBUG00000005304	hdlbpb	90	65.000	Eptatretus_burgeri
ENSPMAG00000000249	-	99	55.063	ENSELUG00000019925	hdlbpb	91	54.605	Esox_lucius
ENSPMAG00000000249	-	99	64.103	ENSFHEG00000001701	hdlbpb	85	64.238	Fundulus_heteroclitus
ENSPMAG00000000249	-	81	63.684	ENSGMOG00000004522	hdlbpb	63	64.444	Gadus_morhua
ENSPMAG00000000249	-	99	65.064	ENSGAFG00000005278	hdlbpb	92	65.232	Gambusia_affinis
ENSPMAG00000000249	-	99	63.141	ENSGACG00000019361	hdlbpb	93	63.000	Gasterosteus_aculeatus
ENSPMAG00000000249	-	99	64.744	ENSHBUG00000018434	hdlbpb	92	64.901	Haplochromis_burtoni
ENSPMAG00000000249	-	99	64.217	ENSIPUG00000003291	HDLBP	91	65.000	Ictalurus_punctatus
ENSPMAG00000000249	-	99	65.894	ENSKMAG00000016562	hdlbpb	92	66.096	Kryptolebias_marmoratus
ENSPMAG00000000249	-	99	65.064	ENSLBEG00000027855	hdlbpb	92	65.232	Labrus_bergylta
ENSPMAG00000000249	-	98	52.486	ENSLACG00000007661	hdlbpb	81	52.486	Latimeria_chalumnae
ENSPMAG00000000249	-	99	67.869	ENSLOCG00000013909	hdlbpb	92	67.577	Lepisosteus_oculatus
ENSPMAG00000000249	-	99	66.225	ENSMAMG00000003035	hdlbpb	93	66.438	Mastacembelus_armatus
ENSPMAG00000000249	-	99	66.225	ENSMZEG00005021465	hdlbpb	92	66.438	Maylandia_zebra
ENSPMAG00000000249	-	99	63.578	ENSMMOG00000012525	hdlbpb	92	63.787	Mola_mola
ENSPMAG00000000249	-	99	64.650	ENSMALG00000008938	hdlbpb	92	64.570	Monopterus_albus
ENSPMAG00000000249	-	99	64.744	ENSNBRG00000002236	hdlbpb	92	64.901	Neolamprologus_brichardi
ENSPMAG00000000249	-	99	64.744	ENSONIG00000009211	hdlbpb	92	64.901	Oreochromis_niloticus
ENSPMAG00000000249	-	99	63.666	ENSORLG00000006581	hdlbpb	92	63.787	Oryzias_latipes
ENSPMAG00000000249	-	99	63.666	ENSORLG00020010012	hdlbpb	92	63.787	Oryzias_latipes_hni
ENSPMAG00000000249	-	99	63.666	ENSORLG00015006863	hdlbpb	92	63.787	Oryzias_latipes_hsok
ENSPMAG00000000249	-	99	63.344	ENSOMEG00000011131	hdlbpb	92	63.455	Oryzias_melastigma
ENSPMAG00000000249	-	99	68.506	ENSPKIG00000005966	hdlbpb	93	67.905	Paramormyrops_kingsleyae
ENSPMAG00000000249	-	99	64.103	ENSPFOG00000008755	hdlbpb	91	64.238	Poecilia_formosa
ENSPMAG00000000249	-	99	64.423	ENSPLAG00000007055	hdlbpb	92	64.570	Poecilia_latipinna
ENSPMAG00000000249	-	99	64.423	ENSPMEG00000001952	hdlbpb	92	64.570	Poecilia_mexicana
ENSPMAG00000000249	-	99	64.423	ENSPREG00000012848	hdlbpb	92	64.570	Poecilia_reticulata
ENSPMAG00000000249	-	99	64.744	ENSPNYG00000022467	hdlbpb	92	64.901	Pundamilia_nyererei
ENSPMAG00000000249	-	99	65.273	ENSPNAG00000011104	hdlbpb	92	64.883	Pygocentrus_nattereri
ENSPMAG00000000249	-	99	66.558	ENSSFOG00015023199	hdlbpb	92	66.216	Scleropages_formosus
ENSPMAG00000000249	-	99	64.331	ENSSMAG00000008790	hdlbpb	93	64.238	Scophthalmus_maximus
ENSPMAG00000000249	-	99	64.968	ENSSDUG00000020694	hdlbpb	92	64.901	Seriola_dumerili
ENSPMAG00000000249	-	99	64.968	ENSSLDG00000020807	hdlbpb	92	64.901	Seriola_lalandi_dorsalis
ENSPMAG00000000249	-	99	70.890	ENSSPUG00000018688	-	88	70.890	Sphenodon_punctatus
ENSPMAG00000000249	-	99	64.744	ENSSPAG00000016969	hdlbpb	92	64.901	Stegastes_partitus
ENSPMAG00000000249	-	89	57.655	ENSTRUG00000012888	hdlbpb	91	58.249	Takifugu_rubripes
ENSPMAG00000000249	-	99	62.821	ENSTNIG00000002555	hdlbpb	92	64.120	Tetraodon_nigroviridis
ENSPMAG00000000249	-	99	63.799	ENSXCOG00000001797	hdlbpb	91	63.799	Xiphophorus_couchianus
ENSPMAG00000000249	-	99	65.385	ENSXMAG00000015633	hdlbpb	92	65.563	Xiphophorus_maculatus