EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000333 (Gene tree)
Gene ID: -
Gene Symbol: poc1a
Alias: -
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 11663 bases
Position: chrGL483450:1856-13518
Accession: ZDB-GENE-040426-1993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000372	eIF2A	PF08662.11	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000372	-	1395	-	ENSPMAP00000000372	464 (aa)	-	S4R592

Gene Model

Click here to download ENSPMAG00000000333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000333	poc1a	64	31.313	ENSPMAG00000004860	tbl3	72	31.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000333	poc1a	98	63.239	ENSG00000164087	POC1A	87	76.250	Homo_sapiens
ENSPMAG00000000333	poc1a	97	75.080	ENSAPOG00000002677	POC1A	98	60.532	Acanthochromis_polyacanthus
ENSPMAG00000000333	poc1a	98	63.297	ENSAMEG00000009136	POC1A	96	63.297	Ailuropoda_melanoleuca
ENSPMAG00000000333	poc1a	97	61.197	ENSACIG00000018288	poc1a	96	61.197	Amphilophus_citrinellus
ENSPMAG00000000333	poc1a	97	76.101	ENSAOCG00000001066	POC1A	96	62.607	Amphiprion_ocellaris
ENSPMAG00000000333	poc1a	65	78.808	ENSAPEG00000005795	poc1a	88	78.808	Amphiprion_percula
ENSPMAG00000000333	poc1a	98	64.396	ENSAPLG00000007756	POC1A	98	64.396	Anas_platyrhynchos
ENSPMAG00000000333	poc1a	98	62.939	ENSANAG00000030897	POC1A	88	74.085	Aotus_nancymaae
ENSPMAG00000000333	poc1a	97	76.025	ENSACLG00000017869	POC1A	84	76.025	Astatotilapia_calliptera
ENSPMAG00000000333	poc1a	64	82.274	ENSAMXG00000024703	poc1a	85	82.274	Astyanax_mexicanus
ENSPMAG00000000333	poc1a	98	79.514	ENSBTAG00000001471	POC1A	98	62.233	Bos_taurus
ENSPMAG00000000333	poc1a	98	62.500	ENSCJAG00000005972	POC1A	97	75.000	Callithrix_jacchus
ENSPMAG00000000333	poc1a	98	58.333	ENSCAFG00020022379	POC1A	97	58.333	Canis_lupus_dingo
ENSPMAG00000000333	poc1a	98	64.018	ENSCHIG00000002571	POC1A	97	64.018	Capra_hircus
ENSPMAG00000000333	poc1a	98	77.994	ENSTSYG00000008302	POC1A	86	77.994	Carlito_syrichta
ENSPMAG00000000333	poc1a	93	75.357	ENSCAPG00000016201	POC1A	89	75.357	Cavia_aperea
ENSPMAG00000000333	poc1a	98	62.418	ENSCPOG00000006740	POC1A	96	76.025	Cavia_porcellus
ENSPMAG00000000333	poc1a	98	62.719	ENSCCAG00000023380	POC1A	88	74.390	Cebus_capucinus
ENSPMAG00000000333	poc1a	98	77.663	ENSCATG00000021822	POC1A	97	77.663	Cercocebus_atys
ENSPMAG00000000333	poc1a	98	58.333	ENSCLAG00000010593	POC1A	86	70.253	Chinchilla_lanigera
ENSPMAG00000000333	poc1a	99	61.374	ENSCSAG00000013862	POC1A	98	61.374	Chlorocebus_sabaeus
ENSPMAG00000000333	poc1a	61	84.191	ENSCPBG00000016728	POC1A	98	84.191	Chrysemys_picta_bellii
ENSPMAG00000000333	poc1a	73	66.866	ENSCSAVG00000008477	-	87	75.000	Ciona_savignyi
ENSPMAG00000000333	poc1a	91	61.611	ENSCANG00000033064	POC1A	86	77.346	Colobus_angolensis_palliatus
ENSPMAG00000000333	poc1a	80	74.455	ENSCGRG00001007357	Poc1a	90	74.455	Cricetulus_griseus_chok1gshd
ENSPMAG00000000333	poc1a	97	66.667	ENSCSEG00000010287	POC1A	93	58.120	Cynoglossus_semilaevis
ENSPMAG00000000333	poc1a	96	77.193	ENSCVAG00000015594	POC1A	96	77.193	Cyprinodon_variegatus
ENSPMAG00000000333	poc1a	58	62.162	ENSEBUG00000008246	POC1A	60	62.162	Eptatretus_burgeri
ENSPMAG00000000333	poc1a	97	63.319	ENSEBUG00000002614	POC1A	92	63.319	Eptatretus_burgeri
ENSPMAG00000000333	poc1a	64	67.820	ENSEBUG00000008013	poc1a	83	67.820	Eptatretus_burgeri
ENSPMAG00000000333	poc1a	69	78.882	ENSELUG00000015504	poc1a	96	63.193	Esox_lucius
ENSPMAG00000000333	poc1a	67	76.603	ENSFCAG00000015704	POC1A	87	76.603	Felis_catus
ENSPMAG00000000333	poc1a	68	79.430	ENSFALG00000008922	POC1A	78	79.430	Ficedula_albicollis
ENSPMAG00000000333	poc1a	98	62.775	ENSFDAG00000011606	POC1A	96	78.105	Fukomys_damarensis
ENSPMAG00000000333	poc1a	97	59.915	ENSFHEG00000015504	POC1A	95	68.481	Fundulus_heteroclitus
ENSPMAG00000000333	poc1a	98	81.270	ENSGALG00000034572	-	88	81.270	Gallus_gallus
ENSPMAG00000000333	poc1a	98	61.369	ENSGACG00000007015	poc1a	96	61.369	Gasterosteus_aculeatus
ENSPMAG00000000333	poc1a	98	81.150	ENSGAGG00000014637	POC1A	77	81.150	Gopherus_agassizii
ENSPMAG00000000333	poc1a	98	62.719	ENSGGOG00000006652	POC1A	86	77.994	Gorilla_gorilla
ENSPMAG00000000333	poc1a	98	62.335	ENSHGLG00000013436	POC1A	87	75.949	Heterocephalus_glaber_female
ENSPMAG00000000333	poc1a	98	62.335	ENSHGLG00100003479	POC1A	98	62.335	Heterocephalus_glaber_male
ENSPMAG00000000333	poc1a	97	76.976	ENSIPUG00000001227	POC1A	94	76.976	Ictalurus_punctatus
ENSPMAG00000000333	poc1a	78	76.282	ENSSTOG00000002638	POC1A	89	76.282	Ictidomys_tridecemlineatus
ENSPMAG00000000333	poc1a	76	77.023	ENSJJAG00000018739	Poc1a	87	77.023	Jaculus_jaculus
ENSPMAG00000000333	poc1a	97	62.009	ENSLBEG00000016119	POC1A	97	63.100	Labrus_bergylta
ENSPMAG00000000333	poc1a	98	68.341	ENSLACG00000018788	POC1A	91	84.395	Latimeria_chalumnae
ENSPMAG00000000333	poc1a	97	68.584	ENSLOCG00000013801	poc1a	96	68.584	Lepisosteus_oculatus
ENSPMAG00000000333	poc1a	76	73.333	ENSLAFG00000028434	POC1A	100	73.090	Loxodonta_africana
ENSPMAG00000000333	poc1a	99	61.137	ENSMFAG00000001970	POC1A	98	61.137	Macaca_fascicularis
ENSPMAG00000000333	poc1a	98	62.363	ENSMMUG00000012485	POC1A	97	62.363	Macaca_mulatta
ENSPMAG00000000333	poc1a	99	61.137	ENSMNEG00000042811	POC1A	98	61.137	Macaca_nemestrina
ENSPMAG00000000333	poc1a	99	61.137	ENSMLEG00000039574	POC1A	86	76.699	Mandrillus_leucophaeus
ENSPMAG00000000333	poc1a	96	61.290	ENSMAMG00000014233	POC1A	97	61.290	Mastacembelus_armatus
ENSPMAG00000000333	poc1a	97	62.338	ENSMZEG00005013503	POC1A	96	62.338	Maylandia_zebra
ENSPMAG00000000333	poc1a	98	67.177	ENSMGAG00000001628	POC1A	97	67.177	Meleagris_gallopavo
ENSPMAG00000000333	poc1a	98	61.674	ENSMAUG00000017403	Poc1a	87	75.710	Mesocricetus_auratus
ENSPMAG00000000333	poc1a	67	78.846	ENSMICG00000002709	POC1A	87	78.846	Microcebus_murinus
ENSPMAG00000000333	poc1a	94	62.243	ENSMOCG00000003396	Poc1a	99	62.356	Microtus_ochrogaster
ENSPMAG00000000333	poc1a	98	68.732	ENSMMOG00000010427	poc1a	81	68.732	Mola_mola
ENSPMAG00000000333	poc1a	67	77.742	ENSMODG00000011717	POC1A	80	77.742	Monodelphis_domestica
ENSPMAG00000000333	poc1a	68	76.101	ENSMALG00000009054	poc1a	85	76.101	Monopterus_albus
ENSPMAG00000000333	poc1a	98	60.390	MGP_CAROLIEiJ_G0032617	Poc1a	96	75.472	Mus_caroli
ENSPMAG00000000333	poc1a	95	60.579	ENSMUSG00000023345	Poc1a	96	75.157	Mus_musculus
ENSPMAG00000000333	poc1a	98	61.388	MGP_PahariEiJ_G0015485	Poc1a	87	75.157	Mus_pahari
ENSPMAG00000000333	poc1a	80	75.389	MGP_SPRETEiJ_G0033763	Poc1a	96	75.157	Mus_spretus
ENSPMAG00000000333	poc1a	98	62.500	ENSMPUG00000011723	POC1A	97	62.500	Mustela_putorius_furo
ENSPMAG00000000333	poc1a	98	77.994	ENSMLUG00000015092	POC1A	70	77.994	Myotis_lucifugus
ENSPMAG00000000333	poc1a	66	78.827	ENSNGAG00000005212	Poc1a	76	78.827	Nannospalax_galili
ENSPMAG00000000333	poc1a	96	60.403	ENSNBRG00000022135	poc1a	95	60.403	Neolamprologus_brichardi
ENSPMAG00000000333	poc1a	99	61.374	ENSNLEG00000007084	POC1A	97	75.312	Nomascus_leucogenys
ENSPMAG00000000333	poc1a	63	68.151	ENSMEUG00000007715	-	72	68.151	Notamacropus_eugenii
ENSPMAG00000000333	poc1a	66	75.704	ENSOPRG00000008831	POC1A	70	75.704	Ochotona_princeps
ENSPMAG00000000333	poc1a	69	77.044	ENSODEG00000018290	POC1A	77	77.044	Octodon_degus
ENSPMAG00000000333	poc1a	97	61.290	ENSONIG00000014378	POC1A	96	61.290	Oreochromis_niloticus
ENSPMAG00000000333	poc1a	65	76.534	ENSOCUG00000002080	POC1A	75	76.534	Oryctolagus_cuniculus
ENSPMAG00000000333	poc1a	97	58.925	ENSOMEG00000019834	POC1A	96	58.723	Oryzias_melastigma
ENSPMAG00000000333	poc1a	67	78.387	ENSOGAG00000032245	POC1A	76	78.387	Otolemur_garnettii
ENSPMAG00000000333	poc1a	98	64.537	ENSOARG00000006352	POC1A	97	64.459	Ovis_aries
ENSPMAG00000000333	poc1a	99	62.559	ENSPPAG00000043583	POC1A	87	76.250	Pan_paniscus
ENSPMAG00000000333	poc1a	67	76.603	ENSPPRG00000003365	POC1A	87	76.603	Panthera_pardus
ENSPMAG00000000333	poc1a	60	76.534	ENSPTIG00000005388	POC1A	75	76.534	Panthera_tigris_altaica
ENSPMAG00000000333	poc1a	99	62.085	ENSPTRG00000014989	POC1A	97	69.062	Pan_troglodytes
ENSPMAG00000000333	poc1a	68	81.073	ENSPSIG00000014809	POC1A	90	81.073	Pelodiscus_sinensis
ENSPMAG00000000333	poc1a	97	77.000	ENSPMGG00000005356	poc1a	75	77.000	Periophthalmus_magnuspinnatus
ENSPMAG00000000333	poc1a	93	60.930	ENSPEMG00000024131	Poc1a	97	75.701	Peromyscus_maniculatus_bairdii
ENSPMAG00000000333	poc1a	98	59.259	ENSPCIG00000018160	POC1A	86	74.691	Phascolarctos_cinereus
ENSPMAG00000000333	poc1a	98	63.239	ENSPPYG00000013816	POC1A	97	63.239	Pongo_abelii
ENSPMAG00000000333	poc1a	98	62.801	ENSPCAG00000002118	POC1A	98	62.801	Procavia_capensis
ENSPMAG00000000333	poc1a	69	79.061	ENSPCOG00000012625	POC1A	87	79.061	Propithecus_coquereli
ENSPMAG00000000333	poc1a	67	67.308	ENSPVAG00000012480	POC1A	82	83.333	Pteropus_vampyrus
ENSPMAG00000000333	poc1a	97	76.025	ENSPNYG00000019517	poc1a	95	63.758	Pundamilia_nyererei
ENSPMAG00000000333	poc1a	98	66.887	ENSPNAG00000007556	POC1A	95	66.887	Pygocentrus_nattereri
ENSPMAG00000000333	poc1a	90	58.711	ENSRNOG00000037295	Poc1a	97	58.711	Rattus_norvegicus
ENSPMAG00000000333	poc1a	91	61.848	ENSRBIG00000031748	POC1A	86	77.346	Rhinopithecus_bieti
ENSPMAG00000000333	poc1a	91	61.611	ENSRROG00000044472	POC1A	86	77.023	Rhinopithecus_roxellana
ENSPMAG00000000333	poc1a	96	61.758	ENSSBOG00000027902	POC1A	88	74.390	Saimiri_boliviensis_boliviensis
ENSPMAG00000000333	poc1a	97	58.093	ENSSMAG00000013505	POC1A	96	60.407	Scophthalmus_maximus
ENSPMAG00000000333	poc1a	78	75.472	ENSSDUG00000016161	POC1A	96	62.227	Seriola_dumerili
ENSPMAG00000000333	poc1a	97	78.201	ENSSLDG00000003828	POC1A	94	78.201	Seriola_lalandi_dorsalis
ENSPMAG00000000333	poc1a	75	80.783	ENSSPUG00000008656	POC1A	98	61.573	Sphenodon_punctatus
ENSPMAG00000000333	poc1a	98	60.671	ENSSPAG00000020330	POC1A	75	60.671	Stegastes_partitus
ENSPMAG00000000333	poc1a	67	77.564	ENSSSCG00000011426	POC1A	77	77.564	Sus_scrofa
ENSPMAG00000000333	poc1a	98	77.143	ENSTGUG00000006036	POC1A	79	77.143	Taeniopygia_guttata
ENSPMAG00000000333	poc1a	97	58.811	ENSTRUG00000007900	POC1A	79	72.449	Takifugu_rubripes
ENSPMAG00000000333	poc1a	97	56.729	ENSTNIG00000014818	POC1A	97	56.729	Tetraodon_nigroviridis
ENSPMAG00000000333	poc1a	98	61.488	ENSTTRG00000016798	POC1A	97	61.488	Tursiops_truncatus
ENSPMAG00000000333	poc1a	98	62.637	ENSUAMG00000020816	POC1A	92	76.534	Ursus_americanus
ENSPMAG00000000333	poc1a	91	61.137	ENSUMAG00000021482	POC1A	98	61.137	Ursus_maritimus
ENSPMAG00000000333	poc1a	98	63.326	ENSXETG00000010813	poc1a	98	63.326	Xenopus_tropicalis