EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000445 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 11678 bases
Position: chrGL476387:42862-54539
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000495	HRDC	PF00570.23	7.2e-16	1	1
ENSPMAP00000000495	DEAD	PF00270.29	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000496	-	2232	-	ENSPMAP00000000495	744 (aa)	-	S4R5L5

Gene Model

Click here to download ENSPMAG00000000445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000445	blm	55	41.745	ENSPMAG00000004572	recql5	68	41.981
ENSPMAG00000000445	blm	73	38.698	ENSPMAG00000005495	recql	86	39.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000445	blm	96	59.441	ENSG00000197299	BLM	51	59.301	Homo_sapiens
ENSPMAG00000000445	blm	96	59.301	ENSAMEG00000013843	BLM	51	57.902	Ailuropoda_melanoleuca
ENSPMAG00000000445	blm	99	57.276	ENSAPLG00000006878	BLM	61	57.085	Anas_platyrhynchos
ENSPMAG00000000445	blm	96	59.301	ENSANAG00000038415	BLM	50	59.301	Aotus_nancymaae
ENSPMAG00000000445	blm	86	42.027	WBGene00001865	him-6	66	41.529	Caenorhabditis_elegans
ENSPMAG00000000445	blm	96	59.441	ENSCJAG00000009803	BLM	50	59.161	Callithrix_jacchus
ENSPMAG00000000445	blm	95	58.964	ENSCAFG00000012385	BLM	50	58.626	Canis_familiaris
ENSPMAG00000000445	blm	95	58.964	ENSCAFG00020016111	BLM	81	60.651	Canis_lupus_dingo
ENSPMAG00000000445	blm	96	59.104	ENSCHIG00000010329	BLM	50	58.824	Capra_hircus
ENSPMAG00000000445	blm	96	59.441	ENSTSYG00000012368	BLM	50	59.441	Carlito_syrichta
ENSPMAG00000000445	blm	98	58.038	ENSCPOG00000001761	BLM	51	57.880	Cavia_porcellus
ENSPMAG00000000445	blm	96	59.720	ENSCCAG00000023069	BLM	51	59.441	Cebus_capucinus
ENSPMAG00000000445	blm	96	59.161	ENSCATG00000040609	BLM	88	62.117	Cercocebus_atys
ENSPMAG00000000445	blm	96	58.832	ENSCLAG00000012111	BLM	50	58.635	Chinchilla_lanigera
ENSPMAG00000000445	blm	96	59.441	ENSCSAG00000017040	BLM	50	59.301	Chlorocebus_sabaeus
ENSPMAG00000000445	blm	99	57.353	ENSCPBG00000025000	BLM	66	61.585	Chrysemys_picta_bellii
ENSPMAG00000000445	blm	60	41.850	ENSCING00000021036	-	77	42.308	Ciona_intestinalis
ENSPMAG00000000445	blm	70	38.868	ENSCSAVG00000007521	-	75	42.316	Ciona_savignyi
ENSPMAG00000000445	blm	96	59.551	ENSCGRG00001024897	Blm	50	59.410	Cricetulus_griseus_chok1gshd
ENSPMAG00000000445	blm	87	63.247	ENSCSEG00000013483	blm	50	62.980	Cynoglossus_semilaevis
ENSPMAG00000000445	blm	96	59.410	ENSDORG00000011033	Blm	68	59.270	Dipodomys_ordii
ENSPMAG00000000445	blm	80	62.248	ENSEBUG00000015743	-	85	61.681	Eptatretus_burgeri
ENSPMAG00000000445	blm	96	54.951	ENSEASG00005006727	BLM	50	54.672	Equus_asinus_asinus
ENSPMAG00000000445	blm	96	58.741	ENSECAG00000011405	BLM	50	58.462	Equus_caballus
ENSPMAG00000000445	blm	96	58.380	ENSEEUG00000001434	BLM	51	58.403	Erinaceus_europaeus
ENSPMAG00000000445	blm	96	58.824	ENSFCAG00000006087	BLM	50	58.824	Felis_catus
ENSPMAG00000000445	blm	99	59.626	ENSFALG00000010981	BLM	53	64.340	Ficedula_albicollis
ENSPMAG00000000445	blm	57	45.455	ENSGMOG00000012988	-	99	45.455	Gadus_morhua
ENSPMAG00000000445	blm	57	52.706	ENSGMOG00000010827	-	97	52.706	Gadus_morhua
ENSPMAG00000000445	blm	92	59.071	ENSGMOG00000016431	blm	74	58.896	Gadus_morhua
ENSPMAG00000000445	blm	57	50.939	ENSGMOG00000010772	-	96	50.939	Gadus_morhua
ENSPMAG00000000445	blm	57	44.731	ENSGMOG00000013063	-	98	44.731	Gadus_morhua
ENSPMAG00000000445	blm	57	47.541	ENSGMOG00000010761	-	99	47.541	Gadus_morhua
ENSPMAG00000000445	blm	99	58.177	ENSGALG00000008256	BLM	53	58.824	Gallus_gallus
ENSPMAG00000000445	blm	88	63.553	ENSGAFG00000001117	blm	50	63.190	Gambusia_affinis
ENSPMAG00000000445	blm	88	62.901	ENSGACG00000010863	blm	99	65.458	Gasterosteus_aculeatus
ENSPMAG00000000445	blm	94	56.719	ENSGAGG00000005383	BLM	68	57.887	Gopherus_agassizii
ENSPMAG00000000445	blm	96	59.580	ENSGGOG00000007710	BLM	89	62.050	Gorilla_gorilla
ENSPMAG00000000445	blm	96	58.824	ENSHGLG00000013231	BLM	50	58.824	Heterocephalus_glaber_female
ENSPMAG00000000445	blm	99	58.422	ENSHCOG00000011455	blm	67	63.190	Hippocampus_comes
ENSPMAG00000000445	blm	99	56.393	ENSIPUG00000000529	blm	57	61.444	Ictalurus_punctatus
ENSPMAG00000000445	blm	96	57.703	ENSSTOG00000005000	BLM	50	57.563	Ictidomys_tridecemlineatus
ENSPMAG00000000445	blm	96	53.857	ENSJJAG00000016322	Blm	66	53.436	Jaculus_jaculus
ENSPMAG00000000445	blm	86	62.461	ENSLBEG00000018729	blm	75	61.934	Labrus_bergylta
ENSPMAG00000000445	blm	96	59.441	ENSMFAG00000042982	BLM	88	62.674	Macaca_fascicularis
ENSPMAG00000000445	blm	96	59.441	ENSMMUG00000019526	BLM	88	62.674	Macaca_mulatta
ENSPMAG00000000445	blm	96	59.021	ENSMNEG00000031251	BLM	88	62.396	Macaca_nemestrina
ENSPMAG00000000445	blm	63	59.322	ENSMGAG00000010473	BLM	79	58.898	Meleagris_gallopavo
ENSPMAG00000000445	blm	96	59.129	ENSMAUG00000008953	Blm	50	58.989	Mesocricetus_auratus
ENSPMAG00000000445	blm	95	59.437	ENSMICG00000034442	BLM	50	59.155	Microcebus_murinus
ENSPMAG00000000445	blm	96	60.253	ENSMOCG00000016367	Blm	50	60.112	Microtus_ochrogaster
ENSPMAG00000000445	blm	96	59.691	MGP_CAROLIEiJ_G0029907	Blm	50	59.551	Mus_caroli
ENSPMAG00000000445	blm	96	59.410	ENSMUSG00000030528	Blm	50	59.270	Mus_musculus
ENSPMAG00000000445	blm	96	59.691	MGP_PahariEiJ_G0013129	Blm	50	59.551	Mus_pahari
ENSPMAG00000000445	blm	96	59.410	MGP_SPRETEiJ_G0031009	Blm	50	59.270	Mus_spretus
ENSPMAG00000000445	blm	95	58.964	ENSMLUG00000014697	BLM	50	58.683	Myotis_lucifugus
ENSPMAG00000000445	blm	96	59.524	ENSNGAG00000001275	Blm	50	59.129	Nannospalax_galili
ENSPMAG00000000445	blm	96	57.063	ENSNLEG00000012087	BLM	67	55.370	Nomascus_leucogenys
ENSPMAG00000000445	blm	88	58.689	ENSODEG00000015373	BLM	63	57.508	Octodon_degus
ENSPMAG00000000445	blm	86	63.453	ENSOANG00000009316	-	83	63.142	Ornithorhynchus_anatinus
ENSPMAG00000000445	blm	96	59.301	ENSOCUG00000013969	BLM	50	58.881	Oryctolagus_cuniculus
ENSPMAG00000000445	blm	94	59.459	ENSORLG00015018640	blm	71	58.974	Oryzias_latipes_hsok
ENSPMAG00000000445	blm	96	58.741	ENSOGAG00000005708	BLM	51	58.741	Otolemur_garnettii
ENSPMAG00000000445	blm	96	59.244	ENSOARG00000012875	BLM	50	58.964	Ovis_aries
ENSPMAG00000000445	blm	96	59.441	ENSPPAG00000032173	BLM	50	59.301	Pan_paniscus
ENSPMAG00000000445	blm	96	58.881	ENSPPRG00000002471	BLM	50	58.683	Panthera_pardus
ENSPMAG00000000445	blm	96	58.322	ENSPTIG00000016168	BLM	50	58.123	Panthera_tigris_altaica
ENSPMAG00000000445	blm	96	59.301	ENSPTRG00000007460	BLM	50	59.161	Pan_troglodytes
ENSPMAG00000000445	blm	96	59.301	ENSPANG00000018572	BLM	88	62.396	Papio_anubis
ENSPMAG00000000445	blm	76	60.213	ENSPSIG00000009792	BLM	99	60.213	Pelodiscus_sinensis
ENSPMAG00000000445	blm	88	62.538	ENSPMGG00000006629	blm	72	62.270	Periophthalmus_magnuspinnatus
ENSPMAG00000000445	blm	96	59.972	ENSPEMG00000017348	Blm	50	59.831	Peromyscus_maniculatus_bairdii
ENSPMAG00000000445	blm	96	59.021	ENSPPYG00000006784	BLM	50	58.881	Pongo_abelii
ENSPMAG00000000445	blm	96	57.865	ENSPCAG00000008960	BLM	50	57.865	Procavia_capensis
ENSPMAG00000000445	blm	96	59.467	ENSRNOG00000011213	Blm	50	59.327	Rattus_norvegicus
ENSPMAG00000000445	blm	96	59.777	ENSRBIG00000029656	BLM	89	62.881	Rhinopithecus_bieti
ENSPMAG00000000445	blm	96	59.777	ENSRROG00000037871	BLM	89	62.881	Rhinopithecus_roxellana
ENSPMAG00000000445	blm	95	57.639	ENSSHAG00000007988	BLM	50	57.382	Sarcophilus_harrisii
ENSPMAG00000000445	blm	88	63.037	ENSSFOG00015015462	blm	53	62.883	Scleropages_formosus
ENSPMAG00000000445	blm	96	53.389	ENSSARG00000006398	BLM	54	53.389	Sorex_araneus
ENSPMAG00000000445	blm	99	55.336	ENSSPUG00000000013	BLM	65	55.154	Sphenodon_punctatus
ENSPMAG00000000445	blm	96	58.626	ENSSSCG00000001816	BLM	51	58.485	Sus_scrofa
ENSPMAG00000000445	blm	99	52.418	ENSTGUG00000009959	-	54	62.016	Taeniopygia_guttata
ENSPMAG00000000445	blm	99	57.547	ENSTRUG00000019860	blm	53	57.355	Takifugu_rubripes
ENSPMAG00000000445	blm	96	58.601	ENSTTRG00000016386	BLM	50	58.462	Tursiops_truncatus
ENSPMAG00000000445	blm	96	59.301	ENSUMAG00000009105	BLM	87	61.934	Ursus_maritimus
ENSPMAG00000000445	blm	96	56.022	ENSVPAG00000000085	BLM	50	56.022	Vicugna_pacos
ENSPMAG00000000445	blm	95	58.906	ENSVVUG00000006402	BLM	50	58.567	Vulpes_vulpes