EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000484 (Gene tree)
Gene ID: -
Gene Symbol: mrm1
Alias: -
Full Name: mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 4067 bases
Position: chrGL483282:1580-5646
Accession: ZDB-GENE-060526-229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000538	SpoU_sub_bind	PF08032.12	4.2e-13	1	1
ENSPMAP00000000538	SpoU_methylase	PF00588.19	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000539	-	657	-	ENSPMAP00000000538	219 (aa)	-	S4R5Q8

Gene Model

Click here to download ENSPMAG00000000484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000484	mrm1	100	37.281	ENSG00000278619	MRM1	59	37.281	Homo_sapiens
ENSPMAG00000000484	mrm1	100	38.813	ENSAPOG00000016309	mrm1	51	38.813	Acanthochromis_polyacanthus
ENSPMAG00000000484	mrm1	81	39.037	ENSAMEG00000008301	MRM1	58	38.158	Ailuropoda_melanoleuca
ENSPMAG00000000484	mrm1	100	40.639	ENSACIG00000012244	mrm1	52	40.639	Amphilophus_citrinellus
ENSPMAG00000000484	mrm1	100	40.639	ENSAOCG00000000362	mrm1	51	40.639	Amphiprion_ocellaris
ENSPMAG00000000484	mrm1	100	40.183	ENSAPEG00000004511	mrm1	51	40.183	Amphiprion_percula
ENSPMAG00000000484	mrm1	100	41.553	ENSAPLG00000006433	MRM1	67	42.727	Anas_platyrhynchos
ENSPMAG00000000484	mrm1	100	40.639	ENSACAG00000002573	MRM1	65	40.639	Anolis_carolinensis
ENSPMAG00000000484	mrm1	100	37.387	ENSANAG00000025500	MRM1	59	37.387	Aotus_nancymaae
ENSPMAG00000000484	mrm1	100	39.269	ENSACLG00000023745	mrm1	68	39.269	Astatotilapia_calliptera
ENSPMAG00000000484	mrm1	100	39.269	ENSAMXG00000030596	mrm1	51	39.269	Astyanax_mexicanus
ENSPMAG00000000484	mrm1	100	39.269	ENSAMXG00000007295	mrm1	51	39.269	Astyanax_mexicanus
ENSPMAG00000000484	mrm1	81	41.711	ENSBTAG00000010311	MRM1	58	40.889	Bos_taurus
ENSPMAG00000000484	mrm1	100	36.937	ENSCJAG00000001023	MRM1	59	36.937	Callithrix_jacchus
ENSPMAG00000000484	mrm1	100	40.909	ENSCAFG00000017849	MRM1	60	40.909	Canis_familiaris
ENSPMAG00000000484	mrm1	100	40.708	ENSCAFG00020002377	MRM1	60	40.909	Canis_lupus_dingo
ENSPMAG00000000484	mrm1	100	39.474	ENSCHIG00000008558	MRM1	58	39.474	Capra_hircus
ENSPMAG00000000484	mrm1	81	42.541	ENSTSYG00000036380	MRM1	58	40.991	Carlito_syrichta
ENSPMAG00000000484	mrm1	81	39.888	ENSCPOG00000004283	MRM1	59	38.813	Cavia_porcellus
ENSPMAG00000000484	mrm1	100	37.387	ENSCCAG00000020032	MRM1	59	37.387	Cebus_capucinus
ENSPMAG00000000484	mrm1	100	38.739	ENSCATG00000041516	MRM1	59	38.739	Cercocebus_atys
ENSPMAG00000000484	mrm1	81	42.541	ENSCLAG00000010960	MRM1	58	40.991	Chinchilla_lanigera
ENSPMAG00000000484	mrm1	100	38.739	ENSCSAG00000006055	MRM1	59	38.739	Chlorocebus_sabaeus
ENSPMAG00000000484	mrm1	80	33.523	ENSCSAVG00000002478	-	72	33.523	Ciona_savignyi
ENSPMAG00000000484	mrm1	100	38.288	ENSCANG00000025543	MRM1	59	38.288	Colobus_angolensis_palliatus
ENSPMAG00000000484	mrm1	81	43.094	ENSCGRG00001001937	Mrm1	66	40.991	Cricetulus_griseus_chok1gshd
ENSPMAG00000000484	mrm1	81	43.094	ENSCGRG00000009593	Mrm1	66	40.991	Cricetulus_griseus_crigri
ENSPMAG00000000484	mrm1	100	37.443	ENSCSEG00000014575	mrm1	55	37.443	Cynoglossus_semilaevis
ENSPMAG00000000484	mrm1	98	39.535	ENSCVAG00000012104	mrm1	53	40.000	Cyprinodon_variegatus
ENSPMAG00000000484	mrm1	71	40.645	ENSDARG00000059658	mrm1	73	40.645	Danio_rerio
ENSPMAG00000000484	mrm1	100	32.883	ENSDNOG00000035159	MRM1	53	32.883	Dasypus_novemcinctus
ENSPMAG00000000484	mrm1	74	42.771	ENSDORG00000013267	Mrm1	66	42.771	Dipodomys_ordii
ENSPMAG00000000484	mrm1	81	39.891	ENSETEG00000000378	MRM1	81	38.839	Echinops_telfairi
ENSPMAG00000000484	mrm1	100	40.090	ENSEASG00005002123	MRM1	59	40.090	Equus_asinus_asinus
ENSPMAG00000000484	mrm1	100	40.090	ENSECAG00000025139	MRM1	59	40.090	Equus_caballus
ENSPMAG00000000484	mrm1	62	43.885	ENSEEUG00000013434	-	75	41.111	Erinaceus_europaeus
ENSPMAG00000000484	mrm1	81	40.107	ENSFCAG00000031667	MRM1	58	39.035	Felis_catus
ENSPMAG00000000484	mrm1	93	38.095	ENSFDAG00000018545	MRM1	67	38.095	Fukomys_damarensis
ENSPMAG00000000484	mrm1	100	40.183	ENSFHEG00000005529	mrm1	56	40.183	Fundulus_heteroclitus
ENSPMAG00000000484	mrm1	95	43.541	ENSGALG00000039523	MRM1	78	43.541	Gallus_gallus
ENSPMAG00000000484	mrm1	100	42.009	ENSGAFG00000012959	mrm1	55	42.009	Gambusia_affinis
ENSPMAG00000000484	mrm1	100	38.356	ENSGACG00000004024	mrm1	77	38.356	Gasterosteus_aculeatus
ENSPMAG00000000484	mrm1	100	39.726	ENSGAGG00000000908	MRM1	50	39.726	Gopherus_agassizii
ENSPMAG00000000484	mrm1	100	37.281	ENSGGOG00000007979	MRM1	59	37.281	Gorilla_gorilla
ENSPMAG00000000484	mrm1	100	38.813	ENSHBUG00000004484	mrm1	68	38.813	Haplochromis_burtoni
ENSPMAG00000000484	mrm1	81	41.989	ENSHGLG00000008701	MRM1	59	39.640	Heterocephalus_glaber_female
ENSPMAG00000000484	mrm1	80	41.011	ENSHGLG00100012646	MRM1	66	40.580	Heterocephalus_glaber_male
ENSPMAG00000000484	mrm1	100	38.813	ENSHCOG00000003665	mrm1	57	38.813	Hippocampus_comes
ENSPMAG00000000484	mrm1	100	37.900	ENSIPUG00000022357	mrm1	53	37.900	Ictalurus_punctatus
ENSPMAG00000000484	mrm1	81	41.436	ENSSTOG00000002422	MRM1	63	40.090	Ictidomys_tridecemlineatus
ENSPMAG00000000484	mrm1	100	39.013	ENSJJAG00000010068	Mrm1	70	39.013	Jaculus_jaculus
ENSPMAG00000000484	mrm1	100	40.541	ENSLBEG00000009581	mrm1	69	40.541	Labrus_bergylta
ENSPMAG00000000484	mrm1	83	40.659	ENSLACG00000017664	MRM1	62	41.361	Latimeria_chalumnae
ENSPMAG00000000484	mrm1	100	41.553	ENSLOCG00000004945	mrm1	66	41.553	Lepisosteus_oculatus
ENSPMAG00000000484	mrm1	81	42.541	ENSLAFG00000012584	MRM1	63	40.991	Loxodonta_africana
ENSPMAG00000000484	mrm1	100	38.739	ENSMFAG00000032112	MRM1	60	38.739	Macaca_fascicularis
ENSPMAG00000000484	mrm1	100	38.739	ENSMMUG00000000622	MRM1	61	38.739	Macaca_mulatta
ENSPMAG00000000484	mrm1	100	38.739	ENSMNEG00000044557	MRM1	60	38.739	Macaca_nemestrina
ENSPMAG00000000484	mrm1	100	38.739	ENSMLEG00000031933	MRM1	59	38.739	Mandrillus_leucophaeus
ENSPMAG00000000484	mrm1	100	40.639	ENSMAMG00000007018	mrm1	67	40.639	Mastacembelus_armatus
ENSPMAG00000000484	mrm1	100	39.269	ENSMZEG00005008320	mrm1	68	39.269	Maylandia_zebra
ENSPMAG00000000484	mrm1	100	40.991	ENSMAUG00000020976	Mrm1	66	40.991	Mesocricetus_auratus
ENSPMAG00000000484	mrm1	100	40.541	ENSMICG00000004216	MRM1	63	40.541	Microcebus_murinus
ENSPMAG00000000484	mrm1	100	41.096	ENSMMOG00000001468	mrm1	62	41.096	Mola_mola
ENSPMAG00000000484	mrm1	100	41.096	ENSMALG00000014364	mrm1	65	41.096	Monopterus_albus
ENSPMAG00000000484	mrm1	81	43.094	MGP_CAROLIEiJ_G0016896	Mrm1	65	40.991	Mus_caroli
ENSPMAG00000000484	mrm1	81	44.199	ENSMUSG00000018405	Mrm1	65	41.892	Mus_musculus
ENSPMAG00000000484	mrm1	81	43.646	MGP_PahariEiJ_G0018026	Mrm1	65	41.441	Mus_pahari
ENSPMAG00000000484	mrm1	81	43.094	MGP_SPRETEiJ_G0017741	Mrm1	65	40.991	Mus_spretus
ENSPMAG00000000484	mrm1	81	40.107	ENSMPUG00000015063	MRM1	58	39.035	Mustela_putorius_furo
ENSPMAG00000000484	mrm1	100	40.991	ENSMLUG00000013208	MRM1	59	40.991	Myotis_lucifugus
ENSPMAG00000000484	mrm1	81	42.541	ENSNGAG00000019175	Mrm1	64	40.991	Nannospalax_galili
ENSPMAG00000000484	mrm1	100	39.269	ENSNBRG00000023533	mrm1	68	39.269	Neolamprologus_brichardi
ENSPMAG00000000484	mrm1	100	37.281	ENSNLEG00000002300	MRM1	59	37.281	Nomascus_leucogenys
ENSPMAG00000000484	mrm1	81	42.077	ENSOPRG00000012866	MRM1	60	40.625	Ochotona_princeps
ENSPMAG00000000484	mrm1	100	39.269	ENSONIG00000021236	mrm1	69	39.269	Oreochromis_niloticus
ENSPMAG00000000484	mrm1	81	42.935	ENSOCUG00000012149	MRM1	57	40.000	Oryctolagus_cuniculus
ENSPMAG00000000484	mrm1	100	39.269	ENSORLG00000025876	mrm1	66	39.269	Oryzias_latipes
ENSPMAG00000000484	mrm1	100	39.726	ENSORLG00020021701	mrm1	66	39.726	Oryzias_latipes_hni
ENSPMAG00000000484	mrm1	100	39.726	ENSORLG00015020702	mrm1	66	39.726	Oryzias_latipes_hsok
ENSPMAG00000000484	mrm1	100	40.639	ENSOMEG00000003504	mrm1	66	40.639	Oryzias_melastigma
ENSPMAG00000000484	mrm1	100	40.991	ENSOGAG00000013785	MRM1	66	40.991	Otolemur_garnettii
ENSPMAG00000000484	mrm1	100	39.474	ENSOARG00000018616	MRM1	58	39.474	Ovis_aries
ENSPMAG00000000484	mrm1	100	37.281	ENSPPAG00000043135	MRM1	60	37.281	Pan_paniscus
ENSPMAG00000000484	mrm1	81	40.107	ENSPPRG00000023620	MRM1	58	39.035	Panthera_pardus
ENSPMAG00000000484	mrm1	81	40.331	ENSPTIG00000009829	MRM1	72	39.545	Panthera_tigris_altaica
ENSPMAG00000000484	mrm1	100	37.281	ENSPTRG00000009049	MRM1	59	37.281	Pan_troglodytes
ENSPMAG00000000484	mrm1	100	38.739	ENSPANG00000022126	MRM1	59	38.739	Papio_anubis
ENSPMAG00000000484	mrm1	100	42.009	ENSPKIG00000007654	mrm1	56	42.009	Paramormyrops_kingsleyae
ENSPMAG00000000484	mrm1	100	39.269	ENSPSIG00000017622	MRM1	74	39.269	Pelodiscus_sinensis
ENSPMAG00000000484	mrm1	98	34.112	ENSPMGG00000003905	mrm1	61	35.160	Periophthalmus_magnuspinnatus
ENSPMAG00000000484	mrm1	100	39.286	ENSPCIG00000003352	MRM1	55	40.179	Phascolarctos_cinereus
ENSPMAG00000000484	mrm1	100	42.466	ENSPLAG00000020759	mrm1	52	42.466	Poecilia_latipinna
ENSPMAG00000000484	mrm1	100	42.466	ENSPMEG00000021744	mrm1	52	42.466	Poecilia_mexicana
ENSPMAG00000000484	mrm1	100	42.922	ENSPREG00000013224	mrm1	56	42.922	Poecilia_reticulata
ENSPMAG00000000484	mrm1	100	30.631	ENSPCAG00000011756	MRM1	59	30.631	Procavia_capensis
ENSPMAG00000000484	mrm1	100	41.441	ENSPCOG00000020871	MRM1	62	41.441	Propithecus_coquereli
ENSPMAG00000000484	mrm1	100	39.269	ENSPNYG00000000528	mrm1	68	39.269	Pundamilia_nyererei
ENSPMAG00000000484	mrm1	100	41.096	ENSPNAG00000014551	mrm1	50	41.096	Pygocentrus_nattereri
ENSPMAG00000000484	mrm1	100	41.441	ENSRNOG00000027901	Mrm1	65	41.441	Rattus_norvegicus
ENSPMAG00000000484	mrm1	100	38.288	ENSRBIG00000040494	MRM1	59	38.288	Rhinopithecus_bieti
ENSPMAG00000000484	mrm1	100	38.288	ENSRROG00000041704	MRM1	59	38.288	Rhinopithecus_roxellana
ENSPMAG00000000484	mrm1	100	37.281	ENSSBOG00000024145	MRM1	59	37.281	Saimiri_boliviensis_boliviensis
ENSPMAG00000000484	mrm1	100	42.466	ENSSFOG00015022117	mrm1	52	42.466	Scleropages_formosus
ENSPMAG00000000484	mrm1	100	38.813	ENSSMAG00000009657	mrm1	67	38.813	Scophthalmus_maximus
ENSPMAG00000000484	mrm1	100	39.726	ENSSDUG00000009089	mrm1	52	39.726	Seriola_dumerili
ENSPMAG00000000484	mrm1	100	39.269	ENSSLDG00000024141	mrm1	58	39.269	Seriola_lalandi_dorsalis
ENSPMAG00000000484	mrm1	100	40.639	ENSSPUG00000000265	MRM1	53	40.639	Sphenodon_punctatus
ENSPMAG00000000484	mrm1	100	41.441	ENSSSCG00000017691	MRM1	57	41.441	Sus_scrofa
ENSPMAG00000000484	mrm1	68	43.624	ENSTGUG00000008048	MRM1	72	43.624	Taeniopygia_guttata
ENSPMAG00000000484	mrm1	98	39.352	ENSTRUG00000011737	mrm1	55	39.819	Takifugu_rubripes
ENSPMAG00000000484	mrm1	100	40.639	ENSTNIG00000010088	mrm1	56	40.639	Tetraodon_nigroviridis
ENSPMAG00000000484	mrm1	81	41.667	ENSTBEG00000007237	-	77	41.667	Tupaia_belangeri
ENSPMAG00000000484	mrm1	81	41.176	ENSTTRG00000011984	MRM1	58	39.912	Tursiops_truncatus
ENSPMAG00000000484	mrm1	81	39.572	ENSUAMG00000023152	MRM1	66	38.596	Ursus_americanus
ENSPMAG00000000484	mrm1	81	41.711	ENSVVUG00000018420	MRM1	50	40.351	Vulpes_vulpes
ENSPMAG00000000484	mrm1	100	42.922	ENSXCOG00000003622	mrm1	57	42.922	Xiphophorus_couchianus
ENSPMAG00000000484	mrm1	100	42.922	ENSXMAG00000014890	mrm1	56	42.922	Xiphophorus_maculatus