EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000514 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: -
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 3376 bases
Position: chrGL482199:1536-4911
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000570	RF-1	PF00472.20	6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000571	-	774	-	ENSPMAP00000000570	111 (aa)	-	S4R5U0

Gene Model

Click here to download ENSPMAG00000000514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSG00000130921	C12orf65	61	63.095	Homo_sapiens
ENSPMAG00000000514	si:ch211-275j6.5	100	54.955	ENSAPOG00000000995	si:ch211-275j6.5	67	54.955	Acanthochromis_polyacanthus
ENSPMAG00000000514	si:ch211-275j6.5	66	72.603	ENSAMEG00000015144	C12orf65	69	54.545	Ailuropoda_melanoleuca
ENSPMAG00000000514	si:ch211-275j6.5	100	56.757	ENSACIG00000001644	si:ch211-275j6.5	69	56.757	Amphilophus_citrinellus
ENSPMAG00000000514	si:ch211-275j6.5	92	58.824	ENSAOCG00000005589	si:ch211-275j6.5	65	58.824	Amphiprion_ocellaris
ENSPMAG00000000514	si:ch211-275j6.5	100	54.955	ENSAPEG00000024618	si:ch211-275j6.5	68	54.955	Amphiprion_percula
ENSPMAG00000000514	si:ch211-275j6.5	100	53.153	ENSATEG00000011661	si:ch211-275j6.5	59	53.153	Anabas_testudineus
ENSPMAG00000000514	si:ch211-275j6.5	94	57.692	ENSAPLG00000016073	C12orf65	87	57.692	Anas_platyrhynchos
ENSPMAG00000000514	si:ch211-275j6.5	94	59.615	ENSACAG00000015561	C12orf65	53	59.615	Anolis_carolinensis
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSANAG00000022881	C12orf65	65	53.704	Aotus_nancymaae
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSACLG00000023906	si:ch211-275j6.5	69	54.054	Astatotilapia_calliptera
ENSPMAG00000000514	si:ch211-275j6.5	64	71.831	ENSAMXG00000031765	si:ch211-275j6.5	64	53.846	Astyanax_mexicanus
ENSPMAG00000000514	si:ch211-275j6.5	92	55.882	ENSBTAG00000020503	C17H12orf65	59	55.882	Bos_taurus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSCJAG00000016579	C12orf65	66	54.630	Callithrix_jacchus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSCAFG00020016169	C12orf65	63	55.769	Canis_lupus_dingo
ENSPMAG00000000514	si:ch211-275j6.5	99	53.636	ENSCHIG00000022229	C12orf65	62	53.636	Capra_hircus
ENSPMAG00000000514	si:ch211-275j6.5	62	69.565	ENSCAPG00000014691	C12orf65	60	54.054	Cavia_aperea
ENSPMAG00000000514	si:ch211-275j6.5	62	69.565	ENSCPOG00000007583	C12orf65	60	54.054	Cavia_porcellus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSCATG00000040685	C12orf65	65	54.630	Cercocebus_atys
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSCLAG00000014329	C12orf65	58	54.630	Chinchilla_lanigera
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSCSAG00000002068	C12orf65	64	54.630	Chlorocebus_sabaeus
ENSPMAG00000000514	si:ch211-275j6.5	94	54.808	ENSCPBG00000025970	C12orf65	63	54.808	Chrysemys_picta_bellii
ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	ENSCGRG00001013424	2810006K23Rik	57	57.692	Cricetulus_griseus_chok1gshd
ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	ENSCGRG00000003037	2810006K23Rik	57	57.692	Cricetulus_griseus_crigri
ENSPMAG00000000514	si:ch211-275j6.5	85	60.638	ENSCSEG00000014536	si:ch211-275j6.5	61	60.784	Cynoglossus_semilaevis
ENSPMAG00000000514	si:ch211-275j6.5	85	58.511	ENSCVAG00000023000	si:ch211-275j6.5	59	59.000	Cyprinodon_variegatus
ENSPMAG00000000514	si:ch211-275j6.5	94	53.846	ENSDARG00000097803	si:ch211-275j6.5	76	53.846	Danio_rerio
ENSPMAG00000000514	si:ch211-275j6.5	71	64.557	ENSDNOG00000034728	C12orf65	65	54.630	Dasypus_novemcinctus
ENSPMAG00000000514	si:ch211-275j6.5	72	67.500	ENSDORG00000026069	2810006K23Rik	62	56.481	Dipodomys_ordii
ENSPMAG00000000514	si:ch211-275j6.5	96	43.925	FBgn0050100	CG30100	73	43.925	Drosophila_melanogaster
ENSPMAG00000000514	si:ch211-275j6.5	57	74.603	ENSETEG00000005627	C12orf65	65	54.808	Echinops_telfairi
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSEASG00005012587	C12orf65	65	54.630	Equus_asinus_asinus
ENSPMAG00000000514	si:ch211-275j6.5	59	73.846	ENSECAG00000001057	C8H12orf65	65	54.630	Equus_caballus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSEEUG00000007231	C12orf65	65	53.704	Erinaceus_europaeus
ENSPMAG00000000514	si:ch211-275j6.5	92	55.882	ENSELUG00000015178	lg13h12orf65	61	55.882	Esox_lucius
ENSPMAG00000000514	si:ch211-275j6.5	66	72.603	ENSFCAG00000015328	C12orf65	65	55.556	Felis_catus
ENSPMAG00000000514	si:ch211-275j6.5	86	57.292	ENSFALG00000009261	C12orf65	65	57.692	Ficedula_albicollis
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSFHEG00000017567	si:ch211-275j6.5	66	54.054	Fundulus_heteroclitus
ENSPMAG00000000514	si:ch211-275j6.5	92	61.765	ENSGMOG00000012139	si:ch211-275j6.5	69	61.765	Gadus_morhua
ENSPMAG00000000514	si:ch211-275j6.5	94	57.692	ENSGALG00000029390	C15H12ORF65	63	57.692	Gallus_gallus
ENSPMAG00000000514	si:ch211-275j6.5	99	55.752	ENSGACG00000008255	si:ch211-275j6.5	71	55.752	Gasterosteus_aculeatus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSGAGG00000000823	C12orf65	50	71.233	Gopherus_agassizii
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSGGOG00000012850	C12orf65	65	54.630	Gorilla_gorilla
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSHBUG00000007273	si:ch211-275j6.5	69	54.054	Haplochromis_burtoni
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSHGLG00000010966	C12orf65	58	53.704	Heterocephalus_glaber_female
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSHGLG00100018631	C12orf65	58	53.704	Heterocephalus_glaber_male
ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	ENSHCOG00000019848	si:ch211-275j6.5	60	57.843	Hippocampus_comes
ENSPMAG00000000514	si:ch211-275j6.5	92	59.804	ENSIPUG00000020793	si:ch211-275j6.5	63	59.804	Ictalurus_punctatus
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSSTOG00000016463	C12orf65	62	53.704	Ictidomys_tridecemlineatus
ENSPMAG00000000514	si:ch211-275j6.5	97	56.481	ENSJJAG00000023360	2810006K23Rik	58	56.481	Jaculus_jaculus
ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	ENSKMAG00000018733	si:ch211-275j6.5	63	57.843	Kryptolebias_marmoratus
ENSPMAG00000000514	si:ch211-275j6.5	98	57.273	ENSLACG00000017355	C12orf65	67	57.273	Latimeria_chalumnae
ENSPMAG00000000514	si:ch211-275j6.5	92	58.824	ENSLOCG00000005702	si:ch211-275j6.5	84	58.824	Lepisosteus_oculatus
ENSPMAG00000000514	si:ch211-275j6.5	92	55.882	ENSLAFG00000002134	C12orf65	61	55.882	Loxodonta_africana
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSMMUG00000031495	C12orf65	65	54.630	Macaca_mulatta
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSMNEG00000044673	C12orf65	65	54.630	Macaca_nemestrina
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSMLEG00000044309	C12orf65	65	54.630	Mandrillus_leucophaeus
ENSPMAG00000000514	si:ch211-275j6.5	100	54.955	ENSMAMG00000017366	si:ch211-275j6.5	66	54.955	Mastacembelus_armatus
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSMZEG00005000938	si:ch211-275j6.5	68	54.054	Maylandia_zebra
ENSPMAG00000000514	si:ch211-275j6.5	94	57.692	ENSMGAG00000003354	C12orf65	76	57.692	Meleagris_gallopavo
ENSPMAG00000000514	si:ch211-275j6.5	61	73.529	ENSMAUG00000010304	2810006K23Rik	54	73.529	Mesocricetus_auratus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSMICG00000037138	C12orf65	65	54.630	Microcebus_murinus
ENSPMAG00000000514	si:ch211-275j6.5	73	66.667	ENSMOCG00000017477	2810006K23Rik	59	57.407	Microtus_ochrogaster
ENSPMAG00000000514	si:ch211-275j6.5	92	59.804	ENSMMOG00000017134	si:ch211-275j6.5	61	59.804	Mola_mola
ENSPMAG00000000514	si:ch211-275j6.5	100	57.658	ENSMODG00000012450	C12orf65	64	57.658	Monodelphis_domestica
ENSPMAG00000000514	si:ch211-275j6.5	100	53.153	ENSMALG00000012291	si:ch211-275j6.5	60	56.863	Monopterus_albus
ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	MGP_CAROLIEiJ_G0027747	2810006K23Rik	57	56.731	Mus_caroli
ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	ENSMUSG00000047635	2810006K23Rik	57	56.731	Mus_musculus
ENSPMAG00000000514	si:ch211-275j6.5	70	65.385	MGP_SPRETEiJ_G0028745	2810006K23Rik	57	55.769	Mus_spretus
ENSPMAG00000000514	si:ch211-275j6.5	76	66.667	ENSMPUG00000001679	C12orf65	59	58.654	Mustela_putorius_furo
ENSPMAG00000000514	si:ch211-275j6.5	99	56.364	ENSMLUG00000007001	C12orf65	67	56.364	Myotis_lucifugus
ENSPMAG00000000514	si:ch211-275j6.5	97	58.333	ENSNGAG00000010625	2810006K23Rik	60	58.333	Nannospalax_galili
ENSPMAG00000000514	si:ch211-275j6.5	100	54.955	ENSNBRG00000008082	si:ch211-275j6.5	69	54.955	Neolamprologus_brichardi
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSNLEG00000001470	C12orf65	65	55.556	Nomascus_leucogenys
ENSPMAG00000000514	si:ch211-275j6.5	92	59.804	ENSMEUG00000009430	C12orf65	65	59.804	Notamacropus_eugenii
ENSPMAG00000000514	si:ch211-275j6.5	94	54.808	ENSOPRG00000011029	C12orf65	65	54.808	Ochotona_princeps
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSODEG00000011382	-	64	54.054	Octodon_degus
ENSPMAG00000000514	si:ch211-275j6.5	92	58.824	ENSONIG00000013298	si:ch211-275j6.5	61	58.824	Oreochromis_niloticus
ENSPMAG00000000514	si:ch211-275j6.5	94	53.846	ENSOANG00000012866	C12orf65	60	53.846	Ornithorhynchus_anatinus
ENSPMAG00000000514	si:ch211-275j6.5	66	75.342	ENSOCUG00000011888	C12orf65	51	75.342	Oryctolagus_cuniculus
ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	ENSORLG00000006153	si:ch211-275j6.5	61	57.843	Oryzias_latipes
ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	ENSORLG00020017188	si:ch211-275j6.5	61	57.843	Oryzias_latipes_hni
ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	ENSORLG00015005780	c9h12orf65	61	57.843	Oryzias_latipes_hsok
ENSPMAG00000000514	si:ch211-275j6.5	92	58.824	ENSOMEG00000001663	si:ch211-275j6.5	61	58.824	Oryzias_melastigma
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSOGAG00000010778	C12orf65	66	53.704	Otolemur_garnettii
ENSPMAG00000000514	si:ch211-275j6.5	99	53.636	ENSOARG00000005214	C12orf65	65	53.636	Ovis_aries
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSPPAG00000029654	C12orf65	65	54.630	Pan_paniscus
ENSPMAG00000000514	si:ch211-275j6.5	97	56.481	ENSPPRG00000024772	C12orf65	65	56.481	Panthera_pardus
ENSPMAG00000000514	si:ch211-275j6.5	97	56.481	ENSPTIG00000011744	C12orf65	65	56.481	Panthera_tigris_altaica
ENSPMAG00000000514	si:ch211-275j6.5	76	63.095	ENSPTRG00000005595	C12H12orf65	65	54.630	Pan_troglodytes
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSPANG00000015388	C12orf65	65	54.630	Papio_anubis
ENSPMAG00000000514	si:ch211-275j6.5	92	60.784	ENSPKIG00000001571	si:ch211-275j6.5	61	60.784	Paramormyrops_kingsleyae
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSPSIG00000013010	C12orf65	55	57.143	Pelodiscus_sinensis
ENSPMAG00000000514	si:ch211-275j6.5	98	57.143	ENSPMGG00000018342	si:ch211-275j6.5	66	57.143	Periophthalmus_magnuspinnatus
ENSPMAG00000000514	si:ch211-275j6.5	94	56.731	ENSPCIG00000010996	C12orf65	60	56.731	Phascolarctos_cinereus
ENSPMAG00000000514	si:ch211-275j6.5	85	57.447	ENSPLAG00000001661	si:ch211-275j6.5	60	57.843	Poecilia_latipinna
ENSPMAG00000000514	si:ch211-275j6.5	85	57.447	ENSPMEG00000018566	si:ch211-275j6.5	61	57.843	Poecilia_mexicana
ENSPMAG00000000514	si:ch211-275j6.5	85	57.447	ENSPMEG00000009201	si:ch211-275j6.5	61	57.843	Poecilia_mexicana
ENSPMAG00000000514	si:ch211-275j6.5	85	55.319	ENSPREG00000021268	si:ch211-275j6.5	60	55.882	Poecilia_reticulata
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSPPYG00000005082	C12orf65	65	54.630	Pongo_abelii
ENSPMAG00000000514	si:ch211-275j6.5	66	72.603	ENSPCAG00000016193	C12orf65	65	55.556	Procavia_capensis
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSPCOG00000021574	C12orf65	60	53.704	Propithecus_coquereli
ENSPMAG00000000514	si:ch211-275j6.5	97	52.778	ENSPVAG00000015301	C12orf65	65	52.778	Pteropus_vampyrus
ENSPMAG00000000514	si:ch211-275j6.5	100	54.054	ENSPNYG00000014456	si:ch211-275j6.5	69	54.054	Pundamilia_nyererei
ENSPMAG00000000514	si:ch211-275j6.5	94	55.769	ENSPNAG00000019769	si:ch211-275j6.5	62	55.769	Pygocentrus_nattereri
ENSPMAG00000000514	si:ch211-275j6.5	70	66.667	ENSRNOG00000001073	RGD1563482	57	57.692	Rattus_norvegicus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSRBIG00000040789	C12orf65	65	54.630	Rhinopithecus_bieti
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSRROG00000031384	C12orf65	64	53.704	Rhinopithecus_roxellana
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSSBOG00000026629	C12orf65	64	54.630	Saimiri_boliviensis_boliviensis
ENSPMAG00000000514	si:ch211-275j6.5	66	69.863	ENSSHAG00000014988	C12orf65	60	54.054	Sarcophilus_harrisii
ENSPMAG00000000514	si:ch211-275j6.5	85	58.511	ENSSFOG00015019122	si:ch211-275j6.5	58	58.824	Scleropages_formosus
ENSPMAG00000000514	si:ch211-275j6.5	92	60.784	ENSSMAG00000016770	si:ch211-275j6.5	60	60.784	Scophthalmus_maximus
ENSPMAG00000000514	si:ch211-275j6.5	100	57.658	ENSSDUG00000020401	si:ch211-275j6.5	71	57.658	Seriola_dumerili
ENSPMAG00000000514	si:ch211-275j6.5	100	57.658	ENSSLDG00000017638	si:ch211-275j6.5	66	57.658	Seriola_lalandi_dorsalis
ENSPMAG00000000514	si:ch211-275j6.5	69	68.831	ENSSPUG00000012613	C12orf65	63	55.769	Sphenodon_punctatus
ENSPMAG00000000514	si:ch211-275j6.5	100	57.658	ENSSPAG00000023476	si:ch211-275j6.5	66	57.658	Stegastes_partitus
ENSPMAG00000000514	si:ch211-275j6.5	79	63.636	ENSSSCG00000009774	C12orf65	57	63.636	Sus_scrofa
ENSPMAG00000000514	si:ch211-275j6.5	94	56.731	ENSTGUG00000005440	C12orf65	81	56.731	Taeniopygia_guttata
ENSPMAG00000000514	si:ch211-275j6.5	92	59.804	ENSTNIG00000015832	si:ch211-275j6.5	60	59.804	Tetraodon_nigroviridis
ENSPMAG00000000514	si:ch211-275j6.5	59	75.385	ENSTBEG00000012500	C12orf65	65	55.556	Tupaia_belangeri
ENSPMAG00000000514	si:ch211-275j6.5	76	63.095	ENSTTRG00000015880	C12orf65	67	52.252	Tursiops_truncatus
ENSPMAG00000000514	si:ch211-275j6.5	66	72.603	ENSUAMG00000019669	C12orf65	63	56.731	Ursus_americanus
ENSPMAG00000000514	si:ch211-275j6.5	66	72.603	ENSUMAG00000004025	C12orf65	65	55.556	Ursus_maritimus
ENSPMAG00000000514	si:ch211-275j6.5	66	71.233	ENSVVUG00000027811	C12orf65	63	55.769	Vulpes_vulpes
ENSPMAG00000000514	si:ch211-275j6.5	85	58.511	ENSXCOG00000000975	si:ch211-275j6.5	60	58.824	Xiphophorus_couchianus