EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000592 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa (1 of many)
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 25451 bases
Position: chrGL477153:10582-36032
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000653	RRM_1	PF00076.22	3.4e-25	1	2
ENSPMAP00000000653	RRM_1	PF00076.22	3.4e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000654	-	655	-	ENSPMAP00000000653	182 (aa)	-	S4R623

Gene Model

Click here to download ENSPMAG00000000592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000592	trnau1apa	95	59.884	ENSPMAG00000005934	trnau1apa	76	58.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000592	trnau1apa	97	60.227	ENSG00000180098	TRNAU1AP	60	60.227	Homo_sapiens
ENSPMAG00000000592	trnau1apa	95	53.757	ENSAPOG00000007148	TRNAU1AP	54	55.215	Acanthochromis_polyacanthus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSAMEG00000011367	TRNAU1AP	60	60.227	Ailuropoda_melanoleuca
ENSPMAG00000000592	trnau1apa	97	54.237	ENSACIG00000004161	trnau1apa	67	54.237	Amphilophus_citrinellus
ENSPMAG00000000592	trnau1apa	95	53.179	ENSAOCG00000008056	trnau1apa	55	53.179	Amphiprion_ocellaris
ENSPMAG00000000592	trnau1apa	95	53.179	ENSAPEG00000008868	trnau1apa	58	52.841	Amphiprion_percula
ENSPMAG00000000592	trnau1apa	95	52.247	ENSATEG00000012140	trnau1apa	55	52.247	Anabas_testudineus
ENSPMAG00000000592	trnau1apa	96	60.920	ENSAPLG00000002606	TRNAU1AP	62	60.920	Anas_platyrhynchos
ENSPMAG00000000592	trnau1apa	99	48.404	ENSACAG00000003995	-	62	48.404	Anolis_carolinensis
ENSPMAG00000000592	trnau1apa	97	60.227	ENSANAG00000018976	TRNAU1AP	60	60.227	Aotus_nancymaae
ENSPMAG00000000592	trnau1apa	95	54.335	ENSACLG00000018515	trnau1apa	56	54.335	Astatotilapia_calliptera
ENSPMAG00000000592	trnau1apa	97	55.367	ENSAMXG00000013750	trnau1apa	57	55.367	Astyanax_mexicanus
ENSPMAG00000000592	trnau1apa	97	59.659	ENSBTAG00000010393	TRNAU1AP	60	59.659	Bos_taurus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCJAG00000009717	TRNAU1AP	94	62.025	Callithrix_jacchus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCAFG00000011735	TRNAU1AP	60	60.227	Canis_familiaris
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCAFG00020023584	TRNAU1AP	60	60.227	Canis_lupus_dingo
ENSPMAG00000000592	trnau1apa	97	59.659	ENSCHIG00000023215	TRNAU1AP	60	59.659	Capra_hircus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSTSYG00000003506	TRNAU1AP	94	62.025	Carlito_syrichta
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCPOG00000001925	TRNAU1AP	60	60.227	Cavia_porcellus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCCAG00000037506	TRNAU1AP	94	62.025	Cebus_capucinus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCATG00000044617	TRNAU1AP	94	62.025	Cercocebus_atys
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCLAG00000008223	TRNAU1AP	60	60.227	Chinchilla_lanigera
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCSAG00000001014	TRNAU1AP	60	60.227	Chlorocebus_sabaeus
ENSPMAG00000000592	trnau1apa	91	61.446	ENSCPBG00000000121	TRNAU1AP	59	61.446	Chrysemys_picta_bellii
ENSPMAG00000000592	trnau1apa	92	45.238	ENSCSAVG00000011781	-	87	45.238	Ciona_savignyi
ENSPMAG00000000592	trnau1apa	97	47.727	ENSCANG00000041949	TRNAU1AP	55	47.727	Colobus_angolensis_palliatus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCGRG00001004713	Trnau1ap	60	60.227	Cricetulus_griseus_chok1gshd
ENSPMAG00000000592	trnau1apa	97	60.227	ENSCGRG00000014532	Trnau1ap	60	60.227	Cricetulus_griseus_crigri
ENSPMAG00000000592	trnau1apa	97	52.841	ENSCSEG00000006663	trnau1apa	56	52.841	Cynoglossus_semilaevis
ENSPMAG00000000592	trnau1apa	95	54.335	ENSCVAG00000018069	trnau1apa	57	54.217	Cyprinodon_variegatus
ENSPMAG00000000592	trnau1apa	97	50.000	ENSDARG00000101323	trnau1apa	55	50.000	Danio_rerio
ENSPMAG00000000592	trnau1apa	88	53.125	ENSDNOG00000047959	-	81	53.125	Dasypus_novemcinctus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSDNOG00000033009	TRNAU1AP	60	60.227	Dasypus_novemcinctus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSDORG00000006349	Trnau1ap	75	60.227	Dipodomys_ordii
ENSPMAG00000000592	trnau1apa	98	44.444	FBgn0031607	CG15440	53	44.444	Drosophila_melanogaster
ENSPMAG00000000592	trnau1apa	75	59.559	ENSETEG00000012594	TRNAU1AP	54	59.559	Echinops_telfairi
ENSPMAG00000000592	trnau1apa	56	56.637	ENSEBUG00000004709	-	58	56.637	Eptatretus_burgeri
ENSPMAG00000000592	trnau1apa	97	60.227	ENSEASG00005010062	TRNAU1AP	86	65.714	Equus_asinus_asinus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSECAG00000012980	TRNAU1AP	86	65.714	Equus_caballus
ENSPMAG00000000592	trnau1apa	97	53.371	ENSELUG00000017686	trnau1apa	57	53.371	Esox_lucius
ENSPMAG00000000592	trnau1apa	97	60.227	ENSFCAG00000013401	TRNAU1AP	60	60.227	Felis_catus
ENSPMAG00000000592	trnau1apa	91	61.446	ENSFALG00000001371	TRNAU1AP	59	61.446	Ficedula_albicollis
ENSPMAG00000000592	trnau1apa	97	60.795	ENSFDAG00000018599	TRNAU1AP	60	60.795	Fukomys_damarensis
ENSPMAG00000000592	trnau1apa	95	52.247	ENSFHEG00000018232	trnau1apa	58	52.907	Fundulus_heteroclitus
ENSPMAG00000000592	trnau1apa	95	51.445	ENSGMOG00000016508	trnau1apa	57	51.445	Gadus_morhua
ENSPMAG00000000592	trnau1apa	98	60.112	ENSGALG00000001310	-	67	60.112	Gallus_gallus
ENSPMAG00000000592	trnau1apa	95	54.335	ENSGAFG00000004928	trnau1apa	64	54.335	Gambusia_affinis
ENSPMAG00000000592	trnau1apa	95	52.023	ENSGACG00000001443	trnau1apa	56	52.023	Gasterosteus_aculeatus
ENSPMAG00000000592	trnau1apa	91	61.446	ENSGAGG00000004940	TRNAU1AP	59	61.446	Gopherus_agassizii
ENSPMAG00000000592	trnau1apa	97	60.227	ENSGGOG00000003511	TRNAU1AP	94	62.025	Gorilla_gorilla
ENSPMAG00000000592	trnau1apa	95	52.809	ENSHBUG00000002510	trnau1apa	56	52.809	Haplochromis_burtoni
ENSPMAG00000000592	trnau1apa	97	60.795	ENSHGLG00000010380	TRNAU1AP	60	60.795	Heterocephalus_glaber_female
ENSPMAG00000000592	trnau1apa	97	57.955	ENSHGLG00100012699	TRNAU1AP	60	57.955	Heterocephalus_glaber_male
ENSPMAG00000000592	trnau1apa	95	50.000	ENSHCOG00000014770	trnau1apa	56	50.000	Hippocampus_comes
ENSPMAG00000000592	trnau1apa	97	60.227	ENSSTOG00000000079	TRNAU1AP	60	60.227	Ictidomys_tridecemlineatus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSJJAG00000010128	Trnau1ap	60	60.227	Jaculus_jaculus
ENSPMAG00000000592	trnau1apa	95	53.179	ENSKMAG00000001230	trnau1apa	55	53.179	Kryptolebias_marmoratus
ENSPMAG00000000592	trnau1apa	97	51.381	ENSLBEG00000011683	trnau1apa	57	51.381	Labrus_bergylta
ENSPMAG00000000592	trnau1apa	97	47.727	ENSLACG00000005541	TRNAU1AP	60	47.727	Latimeria_chalumnae
ENSPMAG00000000592	trnau1apa	96	53.714	ENSLOCG00000004041	trnau1apa	60	53.714	Lepisosteus_oculatus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSLAFG00000007628	TRNAU1AP	60	60.227	Loxodonta_africana
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMFAG00000043751	TRNAU1AP	94	62.025	Macaca_fascicularis
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMMUG00000006561	TRNAU1AP	60	60.227	Macaca_mulatta
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMNEG00000044201	TRNAU1AP	94	62.025	Macaca_nemestrina
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMLEG00000015649	TRNAU1AP	94	62.025	Mandrillus_leucophaeus
ENSPMAG00000000592	trnau1apa	95	53.757	ENSMAMG00000001247	trnau1apa	61	53.757	Mastacembelus_armatus
ENSPMAG00000000592	trnau1apa	95	54.335	ENSMZEG00005017722	trnau1apa	56	54.335	Maylandia_zebra
ENSPMAG00000000592	trnau1apa	93	61.176	ENSMGAG00000002105	TRNAU1AP	60	61.176	Meleagris_gallopavo
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMICG00000008386	TRNAU1AP	94	62.025	Microcebus_murinus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMOCG00000011189	Trnau1ap	60	60.227	Microtus_ochrogaster
ENSPMAG00000000592	trnau1apa	97	52.273	ENSMMOG00000012107	trnau1apa	59	52.273	Mola_mola
ENSPMAG00000000592	trnau1apa	97	59.091	ENSMODG00000010927	TRNAU1AP	60	59.091	Monodelphis_domestica
ENSPMAG00000000592	trnau1apa	95	53.757	ENSMALG00000016778	trnau1apa	59	51.445	Monopterus_albus
ENSPMAG00000000592	trnau1apa	97	60.227	MGP_CAROLIEiJ_G0026563	Trnau1ap	81	65.714	Mus_caroli
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMUSG00000028898	Trnau1ap	81	65.714	Mus_musculus
ENSPMAG00000000592	trnau1apa	97	60.227	MGP_PahariEiJ_G0028896	Trnau1ap	82	65.714	Mus_pahari
ENSPMAG00000000592	trnau1apa	97	60.227	MGP_SPRETEiJ_G0027544	Trnau1ap	81	65.714	Mus_spretus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMPUG00000015511	TRNAU1AP	60	60.227	Mustela_putorius_furo
ENSPMAG00000000592	trnau1apa	97	60.227	ENSMLUG00000012586	TRNAU1AP	60	60.227	Myotis_lucifugus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSNGAG00000015881	Trnau1ap	60	60.227	Nannospalax_galili
ENSPMAG00000000592	trnau1apa	95	51.977	ENSNBRG00000001758	trnau1apa	56	51.977	Neolamprologus_brichardi
ENSPMAG00000000592	trnau1apa	97	60.227	ENSNLEG00000009822	TRNAU1AP	94	62.025	Nomascus_leucogenys
ENSPMAG00000000592	trnau1apa	93	59.172	ENSMEUG00000006117	TRNAU1AP	60	59.172	Notamacropus_eugenii
ENSPMAG00000000592	trnau1apa	97	60.227	ENSODEG00000002970	TRNAU1AP	60	60.227	Octodon_degus
ENSPMAG00000000592	trnau1apa	92	54.762	ENSONIG00000004715	trnau1apa	65	54.762	Oreochromis_niloticus
ENSPMAG00000000592	trnau1apa	98	45.000	ENSOANG00000005325	-	60	45.000	Ornithorhynchus_anatinus
ENSPMAG00000000592	trnau1apa	97	45.455	ENSOCUG00000006834	-	67	45.455	Oryctolagus_cuniculus
ENSPMAG00000000592	trnau1apa	97	59.091	ENSOCUG00000011704	-	60	59.091	Oryctolagus_cuniculus
ENSPMAG00000000592	trnau1apa	97	53.409	ENSOCUG00000002353	-	61	53.409	Oryctolagus_cuniculus
ENSPMAG00000000592	trnau1apa	96	53.448	ENSORLG00000010428	trnau1apa	60	53.448	Oryzias_latipes
ENSPMAG00000000592	trnau1apa	95	53.757	ENSORLG00020000926	trnau1ap	55	53.757	Oryzias_latipes_hni
ENSPMAG00000000592	trnau1apa	95	53.757	ENSORLG00015009858	trnau1ap	55	53.757	Oryzias_latipes_hsok
ENSPMAG00000000592	trnau1apa	95	53.757	ENSOMEG00000007873	trnau1apa	55	53.757	Oryzias_melastigma
ENSPMAG00000000592	trnau1apa	97	60.227	ENSOGAG00000002274	TRNAU1AP	60	60.227	Otolemur_garnettii
ENSPMAG00000000592	trnau1apa	97	59.659	ENSOARG00000002843	TRNAU1AP	60	59.659	Ovis_aries
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPPAG00000033927	TRNAU1AP	94	62.025	Pan_paniscus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPPRG00000004416	TRNAU1AP	60	60.227	Panthera_pardus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPTIG00000016677	TRNAU1AP	60	60.227	Panthera_tigris_altaica
ENSPMAG00000000592	trnau1apa	86	59.873	ENSPTRG00000000434	-	59	59.873	Pan_troglodytes
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPANG00000016019	TRNAU1AP	94	62.025	Papio_anubis
ENSPMAG00000000592	trnau1apa	97	53.977	ENSPKIG00000015511	trnau1apa	56	53.977	Paramormyrops_kingsleyae
ENSPMAG00000000592	trnau1apa	91	61.446	ENSPSIG00000006864	TRNAU1AP	59	61.446	Pelodiscus_sinensis
ENSPMAG00000000592	trnau1apa	92	55.952	ENSPMGG00000023893	trnau1apa	57	55.952	Periophthalmus_magnuspinnatus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPEMG00000007877	Trnau1ap	60	60.227	Peromyscus_maniculatus_bairdii
ENSPMAG00000000592	trnau1apa	95	54.335	ENSPFOG00000008100	trnau1apa	55	54.335	Poecilia_formosa
ENSPMAG00000000592	trnau1apa	90	55.828	ENSPLAG00000010236	trnau1apa	54	55.828	Poecilia_latipinna
ENSPMAG00000000592	trnau1apa	95	53.757	ENSPMEG00000016387	trnau1apa	57	54.706	Poecilia_mexicana
ENSPMAG00000000592	trnau1apa	92	55.090	ENSPREG00000019821	trnau1apa	60	55.090	Poecilia_reticulata
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPCOG00000027712	-	60	60.227	Propithecus_coquereli
ENSPMAG00000000592	trnau1apa	73	55.639	ENSPCOG00000023470	-	54	55.639	Propithecus_coquereli
ENSPMAG00000000592	trnau1apa	97	60.227	ENSPVAG00000017214	TRNAU1AP	60	60.227	Pteropus_vampyrus
ENSPMAG00000000592	trnau1apa	95	52.809	ENSPNYG00000010130	trnau1apa	67	52.809	Pundamilia_nyererei
ENSPMAG00000000592	trnau1apa	97	51.136	ENSPNAG00000024905	trnau1apa	64	51.163	Pygocentrus_nattereri
ENSPMAG00000000592	trnau1apa	97	60.227	ENSRNOG00000055344	Trnau1ap	59	60.227	Rattus_norvegicus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSRBIG00000029083	TRNAU1AP	94	62.025	Rhinopithecus_bieti
ENSPMAG00000000592	trnau1apa	97	60.227	ENSRROG00000029128	TRNAU1AP	94	62.025	Rhinopithecus_roxellana
ENSPMAG00000000592	trnau1apa	97	60.227	ENSSBOG00000021299	TRNAU1AP	94	62.025	Saimiri_boliviensis_boliviensis
ENSPMAG00000000592	trnau1apa	97	59.091	ENSSHAG00000008108	TRNAU1AP	60	59.091	Sarcophilus_harrisii
ENSPMAG00000000592	trnau1apa	95	52.023	ENSSMAG00000020851	trnau1apa	55	52.023	Scophthalmus_maximus
ENSPMAG00000000592	trnau1apa	95	52.023	ENSSDUG00000011734	trnau1apa	54	52.023	Seriola_dumerili
ENSPMAG00000000592	trnau1apa	76	48.201	ENSSLDG00000012101	trnau1apa	54	48.201	Seriola_lalandi_dorsalis
ENSPMAG00000000592	trnau1apa	93	60.000	ENSSARG00000007536	TRNAU1AP	60	60.000	Sorex_araneus
ENSPMAG00000000592	trnau1apa	98	57.303	ENSSPUG00000010400	-	61	57.303	Sphenodon_punctatus
ENSPMAG00000000592	trnau1apa	95	54.335	ENSSPAG00000005029	trnau1apa	55	54.335	Stegastes_partitus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSSSCG00000030284	TRNAU1AP	60	60.227	Sus_scrofa
ENSPMAG00000000592	trnau1apa	93	61.176	ENSTGUG00000000735	-	60	61.176	Taeniopygia_guttata
ENSPMAG00000000592	trnau1apa	95	52.601	ENSTRUG00000003352	trnau1apa	56	52.601	Takifugu_rubripes
ENSPMAG00000000592	trnau1apa	95	52.601	ENSTNIG00000006129	trnau1apa	55	52.601	Tetraodon_nigroviridis
ENSPMAG00000000592	trnau1apa	75	51.471	ENSTBEG00000008049	-	54	51.471	Tupaia_belangeri
ENSPMAG00000000592	trnau1apa	97	60.227	ENSTTRG00000001854	TRNAU1AP	60	60.227	Tursiops_truncatus
ENSPMAG00000000592	trnau1apa	91	60.843	ENSUAMG00000008789	TRNAU1AP	59	60.843	Ursus_americanus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSUMAG00000011068	TRNAU1AP	60	60.227	Ursus_maritimus
ENSPMAG00000000592	trnau1apa	97	60.227	ENSVVUG00000012518	TRNAU1AP	58	60.227	Vulpes_vulpes
ENSPMAG00000000592	trnau1apa	95	54.335	ENSXMAG00000017361	trnau1apa	55	54.335	Xiphophorus_maculatus