EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000602 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 3863 bases
Position: chrGL477040:135948-139810
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000668	zf-U1	PF06220.12	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000669	-	804	-	ENSPMAP00000000668	151 (aa)	-	S4R638

Gene Model

Click here to download ENSPMAG00000000602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000602	snrpc	97	64.103	ENSANAG00000020588	-	91	67.308	Aotus_nancymaae
ENSPMAG00000000602	snrpc	98	63.399	ENSANAG00000019726	-	91	68.182	Aotus_nancymaae
ENSPMAG00000000602	snrpc	61	73.684	ENSANAG00000019157	-	99	68.153	Aotus_nancymaae
ENSPMAG00000000602	snrpc	98	55.844	ENSANAG00000021444	-	81	56.489	Aotus_nancymaae
ENSPMAG00000000602	snrpc	98	55.844	ENSANAG00000021026	-	99	56.774	Aotus_nancymaae
ENSPMAG00000000602	snrpc	98	61.783	ENSAMXG00000032641	snrpc	99	60.390	Astyanax_mexicanus
ENSPMAG00000000602	snrpc	98	62.420	ENSCJAG00000043055	-	99	70.701	Callithrix_jacchus
ENSPMAG00000000602	snrpc	98	56.051	ENSCAFG00000025525	-	99	59.873	Canis_familiaris
ENSPMAG00000000602	snrpc	97	52.258	ENSCAFG00020009944	-	75	67.176	Canis_lupus_dingo
ENSPMAG00000000602	snrpc	98	56.863	ENSCHIG00000005039	-	99	54.487	Capra_hircus
ENSPMAG00000000602	snrpc	97	64.103	ENSTSYG00000029745	-	67	73.881	Carlito_syrichta
ENSPMAG00000000602	snrpc	98	56.579	ENSTSYG00000025721	-	99	62.500	Carlito_syrichta
ENSPMAG00000000602	snrpc	96	63.636	ENSCCAG00000022751	-	94	64.935	Cebus_capucinus
ENSPMAG00000000602	snrpc	98	55.333	ENSCCAG00000028293	-	59	76.623	Cebus_capucinus
ENSPMAG00000000602	snrpc	80	63.281	ENSCLAG00000010242	-	81	59.848	Chinchilla_lanigera
ENSPMAG00000000602	snrpc	59	72.826	ENSDARG00000009871	snrpc	99	66.879	Danio_rerio
ENSPMAG00000000602	snrpc	53	79.518	ENSDNOG00000042403	-	94	75.630	Dasypus_novemcinctus
ENSPMAG00000000602	snrpc	54	75.294	ENSDORG00000005955	Snrpc	65	62.914	Dipodomys_ordii
ENSPMAG00000000602	snrpc	97	58.974	ENSETEG00000011265	-	85	69.173	Echinops_telfairi
ENSPMAG00000000602	snrpc	53	74.699	ENSETEG00000008756	-	75	75.325	Echinops_telfairi
ENSPMAG00000000602	snrpc	95	65.068	ENSEBUG00000011445	snrpc	88	65.000	Eptatretus_burgeri
ENSPMAG00000000602	snrpc	98	63.291	ENSELUG00000020489	snrpc	99	62.420	Esox_lucius
ENSPMAG00000000602	snrpc	59	76.344	ENSELUG00000000815	SNRPC	99	64.744	Esox_lucius
ENSPMAG00000000602	snrpc	81	58.400	ENSHGLG00000005871	-	81	58.594	Heterocephalus_glaber_female
ENSPMAG00000000602	snrpc	98	63.694	ENSHGLG00100017764	-	99	68.153	Heterocephalus_glaber_male
ENSPMAG00000000602	snrpc	98	64.968	ENSIPUG00000024851	snrpc	99	69.427	Ictalurus_punctatus
ENSPMAG00000000602	snrpc	91	57.143	ENSMMUG00000045425	-	84	66.917	Macaca_mulatta
ENSPMAG00000000602	snrpc	98	62.745	ENSMMUG00000039415	-	99	70.064	Macaca_mulatta
ENSPMAG00000000602	snrpc	89	57.333	ENSMLEG00000040224	-	74	67.442	Mandrillus_leucophaeus
ENSPMAG00000000602	snrpc	90	48.993	ENSMLEG00000039724	-	65	51.181	Mandrillus_leucophaeus
ENSPMAG00000000602	snrpc	96	60.000	ENSMICG00000036552	-	85	61.842	Microcebus_murinus
ENSPMAG00000000602	snrpc	98	63.333	ENSMALG00000001197	snrpc	99	66.887	Monopterus_albus
ENSPMAG00000000602	snrpc	94	46.309	ENSPPRG00000016017	-	72	51.163	Panthera_pardus
ENSPMAG00000000602	snrpc	55	68.605	ENSPTIG00000013329	-	69	53.125	Panthera_tigris_altaica
ENSPMAG00000000602	snrpc	98	59.236	ENSPANG00000018228	-	78	66.917	Papio_anubis
ENSPMAG00000000602	snrpc	60	68.421	ENSPKIG00000001671	SNRPC	84	65.414	Paramormyrops_kingsleyae
ENSPMAG00000000602	snrpc	60	72.340	ENSPKIG00000003136	snrpc	86	70.149	Paramormyrops_kingsleyae
ENSPMAG00000000602	snrpc	98	66.452	ENSPEMG00000002763	-	99	67.097	Peromyscus_maniculatus_bairdii
ENSPMAG00000000602	snrpc	53	79.518	ENSPPYG00000029902	-	78	80.519	Pongo_abelii
ENSPMAG00000000602	snrpc	98	62.179	ENSPNAG00000012799	snrpc	99	68.590	Pygocentrus_nattereri
ENSPMAG00000000602	snrpc	93	57.692	ENSRBIG00000036353	-	69	67.669	Rhinopithecus_bieti
ENSPMAG00000000602	snrpc	97	62.821	ENSSBOG00000023189	-	77	63.910	Saimiri_boliviensis_boliviensis
ENSPMAG00000000602	snrpc	96	55.782	ENSSBOG00000032882	-	76	61.719	Saimiri_boliviensis_boliviensis
ENSPMAG00000000602	snrpc	94	54.422	ENSSBOG00000032361	-	87	60.769	Saimiri_boliviensis_boliviensis
ENSPMAG00000000602	snrpc	59	71.739	ENSSFOG00015022422	snrpc	99	66.452	Scleropages_formosus
ENSPMAG00000000602	snrpc	59	73.118	ENSSFOG00015019150	snrpc	96	61.783	Scleropages_formosus
ENSPMAG00000000602	snrpc	53	77.108	ENSSARG00000008970	SNRPC	88	56.688	Sorex_araneus
ENSPMAG00000000602	snrpc	98	66.667	ENSTNIG00000018307	snrpc	99	64.151	Tetraodon_nigroviridis
ENSPMAG00000000602	snrpc	61	69.474	ENSTBEG00000015356	-	100	59.211	Tupaia_belangeri
ENSPMAG00000000602	snrpc	98	63.057	ENSXETG00000024721	snrpc	99	68.790	Xenopus_tropicalis