EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000823 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 16754 bases
Position: chrGL477567:29890-46643
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000910	TRM13	PF05206.14	1.9e-73	1	1
ENSPMAP00000000910	zf-U11-48K	PF05253.12	5.1e-08	1	1
ENSPMAP00000000910	zf-TRM13_CCCH	PF11722.8	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000914	-	1425	-	ENSPMAP00000000910	475 (aa)	-	S4R6T0

Gene Model

Click here to download ENSPMAG00000000823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000823	trmt13	97	45.816	ENSG00000122435	TRMT13	94	48.951	Homo_sapiens
ENSPMAG00000000823	trmt13	98	45.312	ENSAPOG00000015131	trmt13	99	45.312	Acanthochromis_polyacanthus
ENSPMAG00000000823	trmt13	100	45.010	ENSAMEG00000008917	TRMT13	95	45.625	Ailuropoda_melanoleuca
ENSPMAG00000000823	trmt13	98	46.570	ENSACIG00000005804	trmt13	95	46.570	Amphilophus_citrinellus
ENSPMAG00000000823	trmt13	98	45.703	ENSAOCG00000023585	trmt13	99	45.703	Amphiprion_ocellaris
ENSPMAG00000000823	trmt13	98	45.898	ENSAPEG00000004025	trmt13	99	45.898	Amphiprion_percula
ENSPMAG00000000823	trmt13	98	48.041	ENSATEG00000006597	trmt13	96	48.140	Anabas_testudineus
ENSPMAG00000000823	trmt13	88	46.667	ENSAPLG00000014924	TRMT13	98	46.667	Anas_platyrhynchos
ENSPMAG00000000823	trmt13	99	47.010	ENSACAG00000003498	TRMT13	97	47.589	Anolis_carolinensis
ENSPMAG00000000823	trmt13	97	46.392	ENSANAG00000019525	TRMT13	88	55.000	Aotus_nancymaae
ENSPMAG00000000823	trmt13	98	47.699	ENSACLG00000020018	trmt13	98	47.699	Astatotilapia_calliptera
ENSPMAG00000000823	trmt13	98	46.822	ENSAMXG00000017963	trmt13	98	46.414	Astyanax_mexicanus
ENSPMAG00000000823	trmt13	100	45.010	ENSBTAG00000015781	TRMT13	95	45.397	Bos_taurus
ENSPMAG00000000823	trmt13	97	45.570	ENSCJAG00000000200	TRMT13	89	56.061	Callithrix_jacchus
ENSPMAG00000000823	trmt13	64	43.082	ENSCAFG00000020021	TRMT13	96	43.396	Canis_familiaris
ENSPMAG00000000823	trmt13	56	53.558	ENSCAFG00020011572	TRMT13	90	53.558	Canis_lupus_dingo
ENSPMAG00000000823	trmt13	100	45.418	ENSCHIG00000015395	TRMT13	95	46.025	Capra_hircus
ENSPMAG00000000823	trmt13	97	45.661	ENSTSYG00000010811	TRMT13	87	57.609	Carlito_syrichta
ENSPMAG00000000823	trmt13	68	39.403	ENSCAPG00000009085	TRMT13	90	39.701	Cavia_aperea
ENSPMAG00000000823	trmt13	100	44.969	ENSCPOG00000000694	TRMT13	95	45.493	Cavia_porcellus
ENSPMAG00000000823	trmt13	97	46.392	ENSCCAG00000023772	TRMT13	88	55.000	Cebus_capucinus
ENSPMAG00000000823	trmt13	97	46.025	ENSCATG00000033556	TRMT13	88	56.000	Cercocebus_atys
ENSPMAG00000000823	trmt13	88	45.727	ENSCLAG00000008220	TRMT13	97	46.420	Chinchilla_lanigera
ENSPMAG00000000823	trmt13	97	45.816	ENSCSAG00000001506	TRMT13	95	45.816	Chlorocebus_sabaeus
ENSPMAG00000000823	trmt13	100	46.926	ENSCPBG00000026671	TRMT13	95	47.280	Chrysemys_picta_bellii
ENSPMAG00000000823	trmt13	97	45.816	ENSCANG00000034659	TRMT13	88	55.000	Colobus_angolensis_palliatus
ENSPMAG00000000823	trmt13	97	45.359	ENSCGRG00001021601	Trmt13	95	45.359	Cricetulus_griseus_chok1gshd
ENSPMAG00000000823	trmt13	51	39.844	ENSCGRG00000000093	-	95	39.844	Cricetulus_griseus_crigri
ENSPMAG00000000823	trmt13	98	46.751	ENSCSEG00000000591	trmt13	97	46.947	Cynoglossus_semilaevis
ENSPMAG00000000823	trmt13	98	46.939	ENSCVAG00000017342	trmt13	93	47.853	Cyprinodon_variegatus
ENSPMAG00000000823	trmt13	99	46.473	ENSDARG00000102846	trmt13	96	46.737	Danio_rerio
ENSPMAG00000000823	trmt13	56	52.434	ENSDNOG00000001710	TRMT13	80	52.434	Dasypus_novemcinctus
ENSPMAG00000000823	trmt13	97	46.347	ENSDORG00000015808	Trmt13	95	46.347	Dipodomys_ordii
ENSPMAG00000000823	trmt13	98	35.430	FBgn0037435	CG18048	94	35.430	Drosophila_melanogaster
ENSPMAG00000000823	trmt13	97	41.263	ENSETEG00000005819	TRMT13	95	41.263	Echinops_telfairi
ENSPMAG00000000823	trmt13	96	43.305	ENSEBUG00000014444	trmt13	96	43.305	Eptatretus_burgeri
ENSPMAG00000000823	trmt13	97	45.979	ENSEASG00005015918	TRMT13	95	45.979	Equus_asinus_asinus
ENSPMAG00000000823	trmt13	97	45.979	ENSECAG00000022626	TRMT13	95	45.979	Equus_caballus
ENSPMAG00000000823	trmt13	69	48.043	ENSEEUG00000000294	TRMT13	67	48.375	Erinaceus_europaeus
ENSPMAG00000000823	trmt13	98	43.763	ENSELUG00000003803	trmt13	97	44.581	Esox_lucius
ENSPMAG00000000823	trmt13	100	44.512	ENSFCAG00000030618	TRMT13	98	48.322	Felis_catus
ENSPMAG00000000823	trmt13	99	48.967	ENSFALG00000002424	TRMT13	94	49.574	Ficedula_albicollis
ENSPMAG00000000823	trmt13	100	44.969	ENSFDAG00000006342	TRMT13	94	45.781	Fukomys_damarensis
ENSPMAG00000000823	trmt13	77	50.000	ENSFHEG00000022954	trmt13	99	48.941	Fundulus_heteroclitus
ENSPMAG00000000823	trmt13	97	43.534	ENSGMOG00000013223	trmt13	99	43.683	Gadus_morhua
ENSPMAG00000000823	trmt13	96	47.619	ENSGALG00000005290	TRMT13	95	47.746	Gallus_gallus
ENSPMAG00000000823	trmt13	76	49.740	ENSGAFG00000001577	trmt13	81	50.000	Gambusia_affinis
ENSPMAG00000000823	trmt13	97	47.974	ENSGACG00000013428	trmt13	96	48.203	Gasterosteus_aculeatus
ENSPMAG00000000823	trmt13	100	47.035	ENSGAGG00000023303	TRMT13	96	54.579	Gopherus_agassizii
ENSPMAG00000000823	trmt13	97	45.607	ENSGGOG00000005616	TRMT13	88	54.000	Gorilla_gorilla
ENSPMAG00000000823	trmt13	98	47.908	ENSHBUG00000007754	trmt13	98	47.908	Haplochromis_burtoni
ENSPMAG00000000823	trmt13	100	44.559	ENSHGLG00000002164	TRMT13	94	45.359	Heterocephalus_glaber_female
ENSPMAG00000000823	trmt13	100	44.559	ENSHGLG00100001618	TRMT13	94	45.359	Heterocephalus_glaber_male
ENSPMAG00000000823	trmt13	97	47.826	ENSHCOG00000020553	trmt13	96	47.939	Hippocampus_comes
ENSPMAG00000000823	trmt13	98	45.860	ENSIPUG00000024787	trmt13	98	46.170	Ictalurus_punctatus
ENSPMAG00000000823	trmt13	97	45.188	ENSSTOG00000013483	TRMT13	95	45.188	Ictidomys_tridecemlineatus
ENSPMAG00000000823	trmt13	97	44.561	ENSJJAG00000018012	Trmt13	96	44.561	Jaculus_jaculus
ENSPMAG00000000823	trmt13	63	48.039	ENSKMAG00000007639	trmt13	91	48.039	Kryptolebias_marmoratus
ENSPMAG00000000823	trmt13	98	47.023	ENSLBEG00000020238	trmt13	99	47.228	Labrus_bergylta
ENSPMAG00000000823	trmt13	98	48.637	ENSLACG00000013153	TRMT13	98	46.929	Latimeria_chalumnae
ENSPMAG00000000823	trmt13	98	47.246	ENSLOCG00000000418	trmt13	97	46.921	Lepisosteus_oculatus
ENSPMAG00000000823	trmt13	76	44.327	ENSLAFG00000002383	TRMT13	98	44.327	Loxodonta_africana
ENSPMAG00000000823	trmt13	97	45.359	ENSMFAG00000034681	TRMT13	88	55.000	Macaca_fascicularis
ENSPMAG00000000823	trmt13	97	45.359	ENSMMUG00000004243	TRMT13	88	55.000	Macaca_mulatta
ENSPMAG00000000823	trmt13	97	45.359	ENSMNEG00000036102	TRMT13	88	55.000	Macaca_nemestrina
ENSPMAG00000000823	trmt13	97	45.816	ENSMLEG00000034258	TRMT13	88	55.000	Mandrillus_leucophaeus
ENSPMAG00000000823	trmt13	97	48.000	ENSMAMG00000016597	trmt13	95	48.000	Mastacembelus_armatus
ENSPMAG00000000823	trmt13	98	47.490	ENSMZEG00005020959	trmt13	98	47.490	Maylandia_zebra
ENSPMAG00000000823	trmt13	88	48.611	ENSMGAG00000006970	TRMT13	98	48.611	Meleagris_gallopavo
ENSPMAG00000000823	trmt13	97	46.203	ENSMAUG00000010448	Trmt13	95	46.203	Mesocricetus_auratus
ENSPMAG00000000823	trmt13	97	45.773	ENSMICG00000005283	TRMT13	94	48.951	Microcebus_murinus
ENSPMAG00000000823	trmt13	97	46.105	ENSMOCG00000019914	Trmt13	95	46.105	Microtus_ochrogaster
ENSPMAG00000000823	trmt13	57	44.727	ENSMMOG00000007762	trmt13	90	44.727	Mola_mola
ENSPMAG00000000823	trmt13	98	46.985	ENSMODG00000003646	TRMT13	95	46.985	Monodelphis_domestica
ENSPMAG00000000823	trmt13	98	47.854	ENSMALG00000020965	trmt13	96	47.854	Monopterus_albus
ENSPMAG00000000823	trmt13	100	45.547	MGP_CAROLIEiJ_G0025568	Trmt13	91	52.695	Mus_caroli
ENSPMAG00000000823	trmt13	100	45.142	ENSMUSG00000033439	Trmt13	91	52.695	Mus_musculus
ENSPMAG00000000823	trmt13	97	46.444	MGP_PahariEiJ_G0027014	Trmt13	91	53.293	Mus_pahari
ENSPMAG00000000823	trmt13	100	45.344	MGP_SPRETEiJ_G0026518	Trmt13	91	52.695	Mus_spretus
ENSPMAG00000000823	trmt13	77	43.386	ENSMPUG00000002078	-	95	43.386	Mustela_putorius_furo
ENSPMAG00000000823	trmt13	97	46.444	ENSMLUG00000002124	TRMT13	95	46.444	Myotis_lucifugus
ENSPMAG00000000823	trmt13	99	44.421	ENSNBRG00000006783	trmt13	97	44.561	Neolamprologus_brichardi
ENSPMAG00000000823	trmt13	97	45.607	ENSNLEG00000035917	TRMT13	88	55.000	Nomascus_leucogenys
ENSPMAG00000000823	trmt13	53	45.455	ENSMEUG00000013346	-	94	46.667	Notamacropus_eugenii
ENSPMAG00000000823	trmt13	56	53.184	ENSOPRG00000012048	TRMT13	54	53.184	Ochotona_princeps
ENSPMAG00000000823	trmt13	100	47.239	ENSONIG00000004574	trmt13	98	48.117	Oreochromis_niloticus
ENSPMAG00000000823	trmt13	88	47.489	ENSOANG00000012057	TRMT13	96	47.489	Ornithorhynchus_anatinus
ENSPMAG00000000823	trmt13	100	45.287	ENSOCUG00000023095	TRMT13	95	46.105	Oryctolagus_cuniculus
ENSPMAG00000000823	trmt13	98	43.648	ENSORLG00000003320	trmt13	98	44.262	Oryzias_latipes
ENSPMAG00000000823	trmt13	98	44.699	ENSORLG00020005972	trmt13	97	44.699	Oryzias_latipes_hni
ENSPMAG00000000823	trmt13	98	47.401	ENSORLG00015002270	trmt13	98	47.401	Oryzias_latipes_hsok
ENSPMAG00000000823	trmt13	98	47.490	ENSOMEG00000006724	trmt13	93	48.326	Oryzias_melastigma
ENSPMAG00000000823	trmt13	100	44.779	ENSOGAG00000005618	TRMT13	92	45.567	Otolemur_garnettii
ENSPMAG00000000823	trmt13	100	45.418	ENSOARG00000017983	TRMT13	95	46.025	Ovis_aries
ENSPMAG00000000823	trmt13	97	46.025	ENSPPAG00000043736	TRMT13	88	54.000	Pan_paniscus
ENSPMAG00000000823	trmt13	100	44.512	ENSPPRG00000003424	TRMT13	100	48.366	Panthera_pardus
ENSPMAG00000000823	trmt13	100	44.512	ENSPTIG00000018598	TRMT13	100	48.366	Panthera_tigris_altaica
ENSPMAG00000000823	trmt13	97	46.025	ENSPTRG00000001001	TRMT13	88	54.000	Pan_troglodytes
ENSPMAG00000000823	trmt13	97	45.816	ENSPANG00000007598	TRMT13	88	55.000	Papio_anubis
ENSPMAG00000000823	trmt13	98	48.069	ENSPKIG00000001514	trmt13	97	47.957	Paramormyrops_kingsleyae
ENSPMAG00000000823	trmt13	89	45.538	ENSPSIG00000012703	TRMT13	99	45.538	Pelodiscus_sinensis
ENSPMAG00000000823	trmt13	98	47.479	ENSPMGG00000013298	trmt13	93	47.579	Periophthalmus_magnuspinnatus
ENSPMAG00000000823	trmt13	97	46.639	ENSPEMG00000000275	Trmt13	95	46.639	Peromyscus_maniculatus_bairdii
ENSPMAG00000000823	trmt13	97	48.305	ENSPCIG00000007699	TRMT13	95	48.305	Phascolarctos_cinereus
ENSPMAG00000000823	trmt13	96	49.127	ENSPFOG00000008675	trmt13	93	49.127	Poecilia_formosa
ENSPMAG00000000823	trmt13	98	48.117	ENSPLAG00000009709	trmt13	99	48.117	Poecilia_latipinna
ENSPMAG00000000823	trmt13	98	48.109	ENSPMEG00000022954	trmt13	99	48.109	Poecilia_mexicana
ENSPMAG00000000823	trmt13	76	51.467	ENSPREG00000005645	trmt13	93	48.276	Poecilia_reticulata
ENSPMAG00000000823	trmt13	97	45.493	ENSPPYG00000001120	TRMT13	95	45.493	Pongo_abelii
ENSPMAG00000000823	trmt13	97	46.025	ENSPCAG00000002340	TRMT13	95	46.025	Procavia_capensis
ENSPMAG00000000823	trmt13	100	45.382	ENSPCOG00000017984	TRMT13	88	54.000	Propithecus_coquereli
ENSPMAG00000000823	trmt13	97	45.474	ENSPVAG00000017430	TRMT13	95	45.474	Pteropus_vampyrus
ENSPMAG00000000823	trmt13	98	46.234	ENSPNYG00000013690	trmt13	98	46.234	Pundamilia_nyererei
ENSPMAG00000000823	trmt13	98	46.154	ENSPNAG00000022130	trmt13	98	46.042	Pygocentrus_nattereri
ENSPMAG00000000823	trmt13	98	46.058	ENSRNOG00000015140	Trmt13	93	46.154	Rattus_norvegicus
ENSPMAG00000000823	trmt13	97	45.816	ENSRBIG00000037686	TRMT13	88	55.000	Rhinopithecus_bieti
ENSPMAG00000000823	trmt13	97	45.816	ENSRROG00000044057	TRMT13	88	55.000	Rhinopithecus_roxellana
ENSPMAG00000000823	trmt13	97	46.025	ENSSBOG00000026541	TRMT13	88	55.000	Saimiri_boliviensis_boliviensis
ENSPMAG00000000823	trmt13	88	46.667	ENSSHAG00000005213	TRMT13	93	46.667	Sarcophilus_harrisii
ENSPMAG00000000823	trmt13	98	46.751	ENSSFOG00015017560	trmt13	97	46.973	Scleropages_formosus
ENSPMAG00000000823	trmt13	99	47.581	ENSSMAG00000014592	trmt13	96	47.746	Scophthalmus_maximus
ENSPMAG00000000823	trmt13	99	47.117	ENSSDUG00000015508	trmt13	95	47.773	Seriola_dumerili
ENSPMAG00000000823	trmt13	99	46.813	ENSSLDG00000019060	trmt13	96	47.465	Seriola_lalandi_dorsalis
ENSPMAG00000000823	trmt13	98	41.788	ENSSARG00000010344	TRMT13	95	41.949	Sorex_araneus
ENSPMAG00000000823	trmt13	96	46.089	ENSSPUG00000016339	TRMT13	97	46.089	Sphenodon_punctatus
ENSPMAG00000000823	trmt13	97	48.739	ENSSPAG00000011922	trmt13	97	48.739	Stegastes_partitus
ENSPMAG00000000823	trmt13	100	45.825	ENSSSCG00000006869	TRMT13	95	46.347	Sus_scrofa
ENSPMAG00000000823	trmt13	97	49.682	ENSTGUG00000005253	TRMT13	97	49.682	Taeniopygia_guttata
ENSPMAG00000000823	trmt13	97	45.435	ENSTRUG00000008400	trmt13	97	45.435	Takifugu_rubripes
ENSPMAG00000000823	trmt13	67	48.148	ENSTBEG00000008911	TRMT13	74	48.148	Tupaia_belangeri
ENSPMAG00000000823	trmt13	100	42.570	ENSUAMG00000017251	TRMT13	95	43.121	Ursus_americanus
ENSPMAG00000000823	trmt13	100	44.578	ENSUMAG00000007901	TRMT13	97	45.372	Ursus_maritimus
ENSPMAG00000000823	trmt13	88	36.697	ENSVPAG00000001034	TRMT13	97	36.697	Vicugna_pacos
ENSPMAG00000000823	trmt13	97	46.444	ENSVVUG00000021996	TRMT13	95	46.444	Vulpes_vulpes
ENSPMAG00000000823	trmt13	100	46.421	ENSXETG00000013204	trmt13	97	46.764	Xenopus_tropicalis
ENSPMAG00000000823	trmt13	98	47.280	ENSXMAG00000010765	trmt13	99	47.280	Xiphophorus_maculatus