EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000000839 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 1214 bases
Position: chrGL480775:18221-19434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000919	zf-C2H2	PF00096.26	4.7e-16	1	3
ENSPMAP00000000919	zf-C2H2	PF00096.26	4.7e-16	2	3
ENSPMAP00000000919	zf-C2H2	PF00096.26	4.7e-16	3	3
ENSPMAP00000000919	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000923	-	315	-	ENSPMAP00000000919	105 (aa)	-	S4R6T9

Gene Model

Click here to download ENSPMAG00000000839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000000839	-	87	38.636	ENSPMAG00000007084	-	99	38.636
ENSPMAG00000000839	-	94	35.922	ENSPMAG00000006708	-	96	35.922
ENSPMAG00000000839	-	75	45.455	ENSPMAG00000001088	-	100	45.455
ENSPMAG00000000839	-	99	42.045	ENSPMAG00000006066	znf366	75	42.045
ENSPMAG00000000839	-	99	47.561	ENSPMAG00000003606	-	71	47.561
ENSPMAG00000000839	-	94	43.750	ENSPMAG00000000404	-	91	43.750
ENSPMAG00000000839	-	94	46.341	ENSPMAG00000000401	-	88	46.341
ENSPMAG00000000839	-	100	59.740	ENSPMAG00000007500	ZNF436	97	59.740
ENSPMAG00000000839	-	89	47.458	ENSPMAG00000008196	-	100	47.458
ENSPMAG00000000839	-	92	43.548	ENSPMAG00000008879	-	97	43.548
ENSPMAG00000000839	-	100	47.692	ENSPMAG00000007731	-	91	47.692
ENSPMAG00000000839	-	94	40.404	ENSPMAG00000001294	-	100	40.404
ENSPMAG00000000839	-	99	45.238	ENSPMAG00000005248	prdm5	59	45.238
ENSPMAG00000000839	-	94	44.737	ENSPMAG00000002022	-	59	44.737
ENSPMAG00000000839	-	93	46.512	ENSPMAG00000005692	-	96	42.857
ENSPMAG00000000839	-	94	47.674	ENSPMAG00000004344	-	89	47.674
ENSPMAG00000000839	-	98	49.351	ENSPMAG00000000706	-	100	49.351
ENSPMAG00000000839	-	98	39.560	ENSPMAG00000008691	-	95	39.560
ENSPMAG00000000839	-	93	43.750	ENSPMAG00000007492	-	74	43.750
ENSPMAG00000000839	-	95	47.059	ENSPMAG00000007983	-	81	47.059
ENSPMAG00000000839	-	94	41.111	ENSPMAG00000004189	-	85	41.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000839	-	100	50.000	ENSAPOG00000019138	-	58	50.000	Acanthochromis_polyacanthus
ENSPMAG00000000839	-	86	42.697	ENSACIG00000004641	-	52	42.697	Amphilophus_citrinellus
ENSPMAG00000000839	-	93	45.918	ENSACIG00000017892	-	63	45.918	Amphilophus_citrinellus
ENSPMAG00000000839	-	100	43.820	ENSAOCG00000016897	-	64	43.820	Amphiprion_ocellaris
ENSPMAG00000000839	-	90	38.462	ENSAOCG00000001325	-	67	38.462	Amphiprion_ocellaris
ENSPMAG00000000839	-	92	34.921	ENSAOCG00000006744	-	63	34.921	Amphiprion_ocellaris
ENSPMAG00000000839	-	94	40.964	ENSAPEG00000010013	-	60	40.964	Amphiprion_percula
ENSPMAG00000000839	-	100	43.820	ENSAPEG00000001556	-	64	43.820	Amphiprion_percula
ENSPMAG00000000839	-	99	47.674	ENSATEG00000018931	-	79	47.674	Anabas_testudineus
ENSPMAG00000000839	-	87	46.774	ENSACLG00000011658	-	52	46.774	Astatotilapia_calliptera
ENSPMAG00000000839	-	92	36.765	ENSACLG00000019154	-	76	36.765	Astatotilapia_calliptera
ENSPMAG00000000839	-	94	38.462	ENSCING00000002128	zf(c2h2)-35	62	38.462	Ciona_intestinalis
ENSPMAG00000000839	-	80	43.678	ENSCSEG00000010264	-	54	43.678	Cynoglossus_semilaevis
ENSPMAG00000000839	-	99	48.193	ENSCSEG00000008525	-	50	48.193	Cynoglossus_semilaevis
ENSPMAG00000000839	-	93	48.750	ENSCSEG00000015593	-	73	48.750	Cynoglossus_semilaevis
ENSPMAG00000000839	-	93	46.875	ENSCSEG00000010453	-	58	46.875	Cynoglossus_semilaevis
ENSPMAG00000000839	-	99	44.231	ENSCVAG00000003250	-	62	44.231	Cyprinodon_variegatus
ENSPMAG00000000839	-	99	43.564	ENSCVAG00000006653	-	61	43.564	Cyprinodon_variegatus
ENSPMAG00000000839	-	99	42.593	ENSCVAG00000015616	-	73	42.593	Cyprinodon_variegatus
ENSPMAG00000000839	-	86	41.026	ENSCVAG00000012682	-	56	41.026	Cyprinodon_variegatus
ENSPMAG00000000839	-	85	44.068	ENSCVAG00000020141	-	59	44.068	Cyprinodon_variegatus
ENSPMAG00000000839	-	88	48.315	ENSEBUG00000007931	-	63	48.315	Eptatretus_burgeri
ENSPMAG00000000839	-	93	40.594	ENSEBUG00000014432	-	70	40.594	Eptatretus_burgeri
ENSPMAG00000000839	-	96	51.220	ENSELUG00000024007	-	58	51.220	Esox_lucius
ENSPMAG00000000839	-	94	47.959	ENSGAFG00000001879	-	77	47.959	Gambusia_affinis
ENSPMAG00000000839	-	94	40.404	ENSGAFG00000008204	-	62	40.404	Gambusia_affinis
ENSPMAG00000000839	-	88	36.364	ENSGAFG00000007528	-	52	36.364	Gambusia_affinis
ENSPMAG00000000839	-	94	44.048	ENSHBUG00000006656	-	59	44.048	Haplochromis_burtoni
ENSPMAG00000000839	-	94	43.902	ENSHCOG00000013489	-	90	42.857	Hippocampus_comes
ENSPMAG00000000839	-	84	39.726	ENSHCOG00000020670	-	73	39.726	Hippocampus_comes
ENSPMAG00000000839	-	94	50.575	ENSHCOG00000001873	-	58	50.575	Hippocampus_comes
ENSPMAG00000000839	-	94	50.575	ENSHCOG00000008550	-	58	50.575	Hippocampus_comes
ENSPMAG00000000839	-	94	45.918	ENSHCOG00000015497	-	72	45.918	Hippocampus_comes
ENSPMAG00000000839	-	99	38.462	ENSKMAG00000007699	-	57	38.462	Kryptolebias_marmoratus
ENSPMAG00000000839	-	99	41.667	ENSLBEG00000006161	-	84	39.175	Labrus_bergylta
ENSPMAG00000000839	-	94	39.583	ENSLBEG00000017424	-	91	48.485	Labrus_bergylta
ENSPMAG00000000839	-	99	46.939	ENSLBEG00000001132	-	61	46.939	Labrus_bergylta
ENSPMAG00000000839	-	92	40.909	ENSLBEG00000007106	-	71	40.909	Labrus_bergylta
ENSPMAG00000000839	-	86	45.349	ENSLBEG00000011210	-	52	45.349	Labrus_bergylta
ENSPMAG00000000839	-	100	50.000	ENSLOCG00000004208	-	97	51.136	Lepisosteus_oculatus
ENSPMAG00000000839	-	99	45.205	ENSMAMG00000017939	-	66	45.205	Mastacembelus_armatus
ENSPMAG00000000839	-	94	47.561	ENSMZEG00005013907	-	71	47.561	Maylandia_zebra
ENSPMAG00000000839	-	90	44.118	ENSMMOG00000013330	-	54	46.296	Mola_mola
ENSPMAG00000000839	-	94	43.564	ENSMALG00000004279	-	73	43.564	Monopterus_albus
ENSPMAG00000000839	-	96	48.649	ENSONIG00000005050	-	51	48.649	Oreochromis_niloticus
ENSPMAG00000000839	-	100	47.917	ENSORLG00000002268	-	67	47.917	Oryzias_latipes
ENSPMAG00000000839	-	94	43.750	ENSORLG00000021885	-	61	43.750	Oryzias_latipes
ENSPMAG00000000839	-	96	44.554	ENSORLG00020018921	-	74	44.554	Oryzias_latipes_hni
ENSPMAG00000000839	-	94	41.121	ENSORLG00015018099	-	67	44.444	Oryzias_latipes_hsok
ENSPMAG00000000839	-	96	39.759	ENSOMEG00000005578	-	63	39.759	Oryzias_melastigma
ENSPMAG00000000839	-	100	40.541	ENSPMGG00000002659	-	84	39.474	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	87	42.222	ENSPMGG00000009571	-	73	42.222	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	87	45.455	ENSPMGG00000002661	-	62	45.455	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	93	50.515	ENSPMGG00000007051	-	54	50.515	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	99	45.055	ENSPMGG00000002455	-	77	48.352	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	82	49.123	ENSPMGG00000019750	-	76	49.123	Periophthalmus_magnuspinnatus
ENSPMAG00000000839	-	99	43.038	ENSPFOG00000018860	-	96	43.038	Poecilia_formosa
ENSPMAG00000000839	-	94	45.783	ENSPFOG00000009491	-	52	45.783	Poecilia_formosa
ENSPMAG00000000839	-	90	40.278	ENSPLAG00000014832	-	62	40.278	Poecilia_latipinna
ENSPMAG00000000839	-	96	44.595	ENSPLAG00000008941	-	77	44.595	Poecilia_latipinna
ENSPMAG00000000839	-	94	41.573	ENSPLAG00000010067	-	68	41.573	Poecilia_latipinna
ENSPMAG00000000839	-	90	40.278	ENSPMEG00000005210	-	62	40.278	Poecilia_mexicana
ENSPMAG00000000839	-	94	45.783	ENSPMEG00000024117	-	52	45.783	Poecilia_mexicana
ENSPMAG00000000839	-	94	41.096	ENSPMEG00000002953	-	56	41.096	Poecilia_mexicana
ENSPMAG00000000839	-	94	41.026	ENSPREG00000002603	-	55	41.026	Poecilia_reticulata
ENSPMAG00000000839	-	94	37.209	ENSPREG00000009488	-	93	37.209	Poecilia_reticulata
ENSPMAG00000000839	-	99	47.727	ENSPNAG00000005946	-	83	47.727	Pygocentrus_nattereri
ENSPMAG00000000839	-	91	40.244	ENSSFOG00015011531	-	81	40.244	Scleropages_formosus
ENSPMAG00000000839	-	100	46.552	ENSSMAG00000013291	-	92	45.238	Scophthalmus_maximus
ENSPMAG00000000839	-	84	45.238	ENSSLDG00000014436	-	70	45.238	Seriola_lalandi_dorsalis
ENSPMAG00000000839	-	94	41.176	ENSSPAG00000011544	-	56	41.176	Stegastes_partitus
ENSPMAG00000000839	-	90	42.105	ENSSPAG00000011533	-	78	42.105	Stegastes_partitus
ENSPMAG00000000839	-	96	44.304	ENSXETG00000012506	znf91	99	44.304	Xenopus_tropicalis
ENSPMAG00000000839	-	93	47.619	ENSXCOG00000000254	-	58	47.619	Xiphophorus_couchianus
ENSPMAG00000000839	-	99	41.414	ENSXCOG00000003441	-	52	41.414	Xiphophorus_couchianus
ENSPMAG00000000839	-	94	42.169	ENSXCOG00000020768	-	67	42.169	Xiphophorus_couchianus
ENSPMAG00000000839	-	82	44.595	ENSXMAG00000023199	-	87	44.595	Xiphophorus_maculatus