EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000000867 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 4873 bases
Position: chrGL476384:140495-145367
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000000948	Mitoc_L55	PF09776.9	5.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000000952	-	791	-	ENSPMAP00000000948	117 (aa)	-	S4R6W8

Gene Model

Click here to download ENSPMAG00000000867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000000867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000000867	zgc:171480	88	41.748	ENSAPOG00000002881	zgc:171480	65	43.158	Acanthochromis_polyacanthus
ENSPMAG00000000867	zgc:171480	88	43.689	ENSACIG00000001646	zgc:171480	68	45.263	Amphilophus_citrinellus
ENSPMAG00000000867	zgc:171480	88	42.718	ENSAOCG00000016155	zgc:171480	65	44.211	Amphiprion_ocellaris
ENSPMAG00000000867	zgc:171480	88	42.718	ENSAPEG00000022327	zgc:171480	65	44.211	Amphiprion_percula
ENSPMAG00000000867	zgc:171480	87	49.038	ENSATEG00000005625	zgc:171480	63	51.042	Anabas_testudineus
ENSPMAG00000000867	zgc:171480	80	50.000	ENSACAG00000006897	-	73	50.000	Anolis_carolinensis
ENSPMAG00000000867	zgc:171480	89	46.154	ENSACLG00000005172	zgc:171480	67	48.421	Astatotilapia_calliptera
ENSPMAG00000000867	zgc:171480	93	44.954	ENSAMXG00000043839	zgc:171480	69	52.688	Astyanax_mexicanus
ENSPMAG00000000867	zgc:171480	96	44.643	ENSCPBG00000001771	-	74	48.421	Chrysemys_picta_bellii
ENSPMAG00000000867	zgc:171480	92	38.889	ENSCSEG00000019533	zgc:171480	67	43.158	Cynoglossus_semilaevis
ENSPMAG00000000867	zgc:171480	80	49.485	ENSDARG00000043402	zgc:171480	69	51.064	Danio_rerio
ENSPMAG00000000867	zgc:171480	98	41.732	ENSELUG00000007716	zgc:171480	70	46.316	Esox_lucius
ENSPMAG00000000867	zgc:171480	81	52.632	ENSFALG00000001083	-	94	52.688	Ficedula_albicollis
ENSPMAG00000000867	zgc:171480	88	43.689	ENSFHEG00000000203	zgc:171480	67	46.392	Fundulus_heteroclitus
ENSPMAG00000000867	zgc:171480	82	51.042	ENSGMOG00000019009	zgc:171480	91	51.579	Gadus_morhua
ENSPMAG00000000867	zgc:171480	91	49.057	ENSGALG00000038820	-	80	51.613	Gallus_gallus
ENSPMAG00000000867	zgc:171480	100	44.538	ENSGAFG00000004832	-	65	49.485	Gambusia_affinis
ENSPMAG00000000867	zgc:171480	80	51.064	ENSGACG00000002136	zgc:171480	100	52.083	Gasterosteus_aculeatus
ENSPMAG00000000867	zgc:171480	87	50.000	ENSGAGG00000001806	-	74	52.128	Gopherus_agassizii
ENSPMAG00000000867	zgc:171480	89	46.154	ENSHBUG00000007895	zgc:171480	67	48.421	Haplochromis_burtoni
ENSPMAG00000000867	zgc:171480	82	47.917	ENSHCOG00000003526	zgc:171480	51	48.454	Hippocampus_comes
ENSPMAG00000000867	zgc:171480	93	47.706	ENSIPUG00000001273	mrpl55	70	51.613	Ictalurus_punctatus
ENSPMAG00000000867	zgc:171480	80	47.872	ENSKMAG00000002011	zgc:171480	72	47.872	Kryptolebias_marmoratus
ENSPMAG00000000867	zgc:171480	100	44.068	ENSLBEG00000010915	zgc:171480	74	45.263	Labrus_bergylta
ENSPMAG00000000867	zgc:171480	100	44.068	ENSLBEG00000016107	-	74	45.263	Labrus_bergylta
ENSPMAG00000000867	zgc:171480	96	47.826	ENSLACG00000016281	zgc:171480	70	52.128	Latimeria_chalumnae
ENSPMAG00000000867	zgc:171480	88	42.718	ENSMAMG00000022250	zgc:171480	63	44.211	Mastacembelus_armatus
ENSPMAG00000000867	zgc:171480	89	46.154	ENSMZEG00005015585	zgc:171480	67	48.421	Maylandia_zebra
ENSPMAG00000000867	zgc:171480	91	46.226	ENSMGAG00000002612	-	80	47.312	Meleagris_gallopavo
ENSPMAG00000000867	zgc:171480	88	40.777	ENSMMOG00000008740	-	70	42.105	Mola_mola
ENSPMAG00000000867	zgc:171480	82	48.958	ENSMALG00000019823	zgc:171480	74	48.421	Monopterus_albus
ENSPMAG00000000867	zgc:171480	89	46.154	ENSNBRG00000019447	zgc:171480	67	48.421	Neolamprologus_brichardi
ENSPMAG00000000867	zgc:171480	89	45.192	ENSONIG00000007645	zgc:171480	69	47.368	Oreochromis_niloticus
ENSPMAG00000000867	zgc:171480	81	45.263	ENSORLG00020006963	zgc:171480	69	45.263	Oryzias_latipes_hni
ENSPMAG00000000867	zgc:171480	81	45.263	ENSORLG00015003266	zgc:171480	68	46.392	Oryzias_latipes_hsok
ENSPMAG00000000867	zgc:171480	81	44.211	ENSOMEG00000008184	zgc:171480	68	44.211	Oryzias_melastigma
ENSPMAG00000000867	zgc:171480	84	48.980	ENSPKIG00000006753	zgc:171480	71	50.538	Paramormyrops_kingsleyae
ENSPMAG00000000867	zgc:171480	96	46.429	ENSPSIG00000010893	-	74	51.064	Pelodiscus_sinensis
ENSPMAG00000000867	zgc:171480	82	46.875	ENSPMGG00000012657	-	73	47.368	Periophthalmus_magnuspinnatus
ENSPMAG00000000867	zgc:171480	86	47.059	ENSPCIG00000021848	-	74	47.368	Phascolarctos_cinereus
ENSPMAG00000000867	zgc:171480	100	41.880	ENSPFOG00000012703	zgc:171480	66	46.316	Poecilia_formosa
ENSPMAG00000000867	zgc:171480	100	41.880	ENSPREG00000020328	zgc:171480	66	46.316	Poecilia_reticulata
ENSPMAG00000000867	zgc:171480	93	47.706	ENSPNAG00000017309	zgc:171480	70	53.763	Pygocentrus_nattereri
ENSPMAG00000000867	zgc:171480	93	49.541	ENSSFOG00015015668	mrpl55	70	52.688	Scleropages_formosus
ENSPMAG00000000867	zgc:171480	88	48.544	ENSSMAG00000005429	zgc:171480	66	50.526	Scophthalmus_maximus
ENSPMAG00000000867	zgc:171480	82	46.875	ENSSDUG00000022556	zgc:171480	63	47.368	Seriola_dumerili
ENSPMAG00000000867	zgc:171480	82	46.875	ENSSLDG00000019598	zgc:171480	63	47.368	Seriola_lalandi_dorsalis
ENSPMAG00000000867	zgc:171480	95	46.154	ENSSPUG00000000735	-	74	47.872	Sphenodon_punctatus
ENSPMAG00000000867	zgc:171480	88	44.660	ENSSPAG00000011598	zgc:171480	66	46.316	Stegastes_partitus
ENSPMAG00000000867	zgc:171480	82	45.833	ENSTRUG00000003082	zgc:171480	65	46.316	Takifugu_rubripes
ENSPMAG00000000867	zgc:171480	85	46.465	ENSXCOG00000005887	zgc:171480	76	47.368	Xiphophorus_couchianus
ENSPMAG00000000867	zgc:171480	100	41.880	ENSXMAG00000007937	zgc:171480	66	47.368	Xiphophorus_maculatus