EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001038 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 10049 bases
Position: chrGL476699:70426-80474
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001166	La	PF05383.17	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001171	-	750	-	ENSPMAP00000001166	250 (aa)	-	S4R7I6

Gene Model

Click here to download ENSPMAG00000001038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001038	-	99	56.693	ENSG00000161813	LARP4	79	63.514	Homo_sapiens
ENSPMAG00000001038	-	99	56.439	ENSACIG00000001198	larp4aa	79	66.197	Amphilophus_citrinellus
ENSPMAG00000001038	-	57	56.643	ENSACIG00000000370	-	72	56.643	Amphilophus_citrinellus
ENSPMAG00000001038	-	97	55.159	ENSAPEG00000015441	larp4ab	57	63.636	Amphiprion_percula
ENSPMAG00000001038	-	99	51.550	ENSACLG00000000777	larp4ab	71	49.225	Astatotilapia_calliptera
ENSPMAG00000001038	-	59	47.973	ENSCCAG00000030343	-	76	47.973	Cebus_capucinus
ENSPMAG00000001038	-	57	55.245	ENSCATG00000039611	-	75	55.245	Cercocebus_atys
ENSPMAG00000001038	-	90	52.632	ENSCANG00000033097	-	55	61.417	Colobus_angolensis_palliatus
ENSPMAG00000001038	-	68	57.714	ENSCGRG00001011032	-	78	57.714	Cricetulus_griseus_chok1gshd
ENSPMAG00000001038	-	61	64.052	ENSCGRG00001011674	-	72	64.052	Cricetulus_griseus_chok1gshd
ENSPMAG00000001038	-	61	62.745	ENSCGRG00001000311	-	80	62.745	Cricetulus_griseus_chok1gshd
ENSPMAG00000001038	-	57	62.676	ENSCGRG00000000087	-	76	62.676	Cricetulus_griseus_crigri
ENSPMAG00000001038	-	56	54.930	ENSCVAG00000001411	-	80	54.930	Cyprinodon_variegatus
ENSPMAG00000001038	-	100	58.400	ENSDARG00000074979	larp4ab	81	63.636	Danio_rerio
ENSPMAG00000001038	-	99	51.969	ENSEASG00005004356	LARP4	64	51.575	Equus_asinus_asinus
ENSPMAG00000001038	-	57	65.734	ENSFDAG00000003796	-	81	64.189	Fukomys_damarensis
ENSPMAG00000001038	-	98	59.274	ENSGAFG00000004280	larp4aa	67	58.468	Gambusia_affinis
ENSPMAG00000001038	-	100	58.498	ENSGACG00000008381	larp4aa	68	57.708	Gasterosteus_aculeatus
ENSPMAG00000001038	-	99	56.693	ENSGGOG00000015230	LARP4	67	56.299	Gorilla_gorilla
ENSPMAG00000001038	-	57	58.451	ENSHBUG00000021929	-	68	58.451	Haplochromis_burtoni
ENSPMAG00000001038	-	96	49.606	ENSHGLG00000010979	-	59	48.425	Heterocephalus_glaber_female
ENSPMAG00000001038	-	96	49.606	ENSHGLG00100002832	-	59	48.425	Heterocephalus_glaber_male
ENSPMAG00000001038	-	89	55.066	ENSHGLG00100000622	-	82	51.955	Heterocephalus_glaber_male
ENSPMAG00000001038	-	98	45.565	ENSJJAG00000014649	-	81	59.712	Jaculus_jaculus
ENSPMAG00000001038	-	57	55.245	ENSMFAG00000001037	-	75	55.245	Macaca_fascicularis
ENSPMAG00000001038	-	57	55.245	ENSMMUG00000045683	-	75	55.245	Macaca_mulatta
ENSPMAG00000001038	-	57	50.350	ENSMNEG00000037799	-	74	50.350	Macaca_nemestrina
ENSPMAG00000001038	-	57	55.944	ENSMLEG00000038232	-	80	55.944	Mandrillus_leucophaeus
ENSPMAG00000001038	-	99	51.550	ENSMZEG00005007771	larp4ab	71	49.225	Maylandia_zebra
ENSPMAG00000001038	-	94	57.143	ENSMICG00000030156	-	73	60.544	Microcebus_murinus
ENSPMAG00000001038	-	56	64.539	ENSMICG00000046883	-	78	64.539	Microcebus_murinus
ENSPMAG00000001038	-	98	53.012	ENSMMOG00000021861	larp4ab	69	46.215	Mola_mola
ENSPMAG00000001038	-	99	55.682	ENSMALG00000018631	larp4aa	74	67.391	Monopterus_albus
ENSPMAG00000001038	-	55	62.319	ENSMALG00000015637	-	59	62.319	Monopterus_albus
ENSPMAG00000001038	-	99	51.550	ENSNBRG00000015675	larp4ab	72	59.398	Neolamprologus_brichardi
ENSPMAG00000001038	-	55	59.124	ENSORLG00000018835	-	69	56.552	Oryzias_latipes
ENSPMAG00000001038	-	55	59.124	ENSORLG00020009602	-	71	55.705	Oryzias_latipes_hni
ENSPMAG00000001038	-	56	58.993	ENSORLG00015005865	-	67	58.993	Oryzias_latipes_hsok
ENSPMAG00000001038	-	100	56.604	ENSOMEG00000019749	larp4aa	72	67.883	Oryzias_melastigma
ENSPMAG00000001038	-	57	57.746	ENSOMEG00000008561	-	74	57.746	Oryzias_melastigma
ENSPMAG00000001038	-	99	50.400	ENSPPAG00000039122	-	57	49.402	Pan_paniscus
ENSPMAG00000001038	-	99	50.400	ENSPTRG00000045907	-	64	49.402	Pan_troglodytes
ENSPMAG00000001038	-	56	65.957	ENSPMGG00000023289	-	92	65.957	Periophthalmus_magnuspinnatus
ENSPMAG00000001038	-	98	54.104	ENSPMGG00000002719	larp4ab	74	55.253	Periophthalmus_magnuspinnatus
ENSPMAG00000001038	-	98	52.381	ENSPREG00000016263	larp4ab	64	60.741	Poecilia_reticulata
ENSPMAG00000001038	-	57	58.451	ENSPNYG00000000915	-	58	58.451	Pundamilia_nyererei
ENSPMAG00000001038	-	99	57.087	ENSRBIG00000038857	-	56	56.693	Rhinopithecus_bieti
ENSPMAG00000001038	-	96	51.181	ENSRROG00000025487	-	70	50.394	Rhinopithecus_roxellana
ENSPMAG00000001038	-	99	57.087	ENSRROG00000042764	-	56	56.693	Rhinopithecus_roxellana
ENSPMAG00000001038	-	54	50.735	ENSSBOG00000035851	-	72	50.735	Saimiri_boliviensis_boliviensis
ENSPMAG00000001038	-	99	58.730	ENSSHAG00000013246	-	73	58.333	Sarcophilus_harrisii
ENSPMAG00000001038	-	98	59.274	ENSSPAG00000007222	larp4aa	76	65.306	Stegastes_partitus
ENSPMAG00000001038	-	94	56.723	ENSTRUG00000015939	larp4aa	68	55.462	Takifugu_rubripes
ENSPMAG00000001038	-	99	58.268	ENSUAMG00000013764	LARP4	56	57.874	Ursus_americanus
ENSPMAG00000001038	-	97	52.846	ENSXCOG00000019635	larp4ab	64	60.584	Xiphophorus_couchianus