EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 15239 bases
Position: chrGL481073:4386-19624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001215	zf-met	PF12874.7	3e-05	1	1
ENSPMAP00000001215	zf-C2H2_jaz	PF12171.8	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001220	-	1566	-	ENSPMAP00000001215	522 (aa)	-	S4R7N5

Gene Model

Click here to download ENSPMAG00000001085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001085	-	100	51.040	ENSG00000122299	ZC3H7A	88	52.239	Homo_sapiens
ENSPMAG00000001085	-	100	49.436	ENSG00000100403	ZC3H7B	54	49.436	Homo_sapiens
ENSPMAG00000001085	-	100	48.308	ENSAMEG00000002171	ZC3H7B	53	48.308	Ailuropoda_melanoleuca
ENSPMAG00000001085	-	93	42.231	ENSACIG00000009388	ZC3H7B	75	42.578	Amphilophus_citrinellus
ENSPMAG00000001085	-	99	43.682	ENSATEG00000007908	ZC3H7B	51	44.043	Anabas_testudineus
ENSPMAG00000001085	-	100	49.906	ENSAPLG00000005880	ZC3H7B	53	49.906	Anas_platyrhynchos
ENSPMAG00000001085	-	100	51.894	ENSAPLG00000013636	ZC3H7A	53	51.894	Anas_platyrhynchos
ENSPMAG00000001085	-	100	49.531	ENSACAG00000004820	ZC3H7B	54	49.531	Anolis_carolinensis
ENSPMAG00000001085	-	100	51.229	ENSANAG00000035407	ZC3H7A	54	51.229	Aotus_nancymaae
ENSPMAG00000001085	-	100	49.436	ENSANAG00000026268	ZC3H7B	55	49.436	Aotus_nancymaae
ENSPMAG00000001085	-	90	45.508	ENSAMXG00000015389	zc3h7ba	60	45.216	Astyanax_mexicanus
ENSPMAG00000001085	-	100	48.872	ENSBTAG00000002782	ZC3H7B	54	48.872	Bos_taurus
ENSPMAG00000001085	-	100	51.796	ENSBTAG00000014826	ZC3H7A	55	51.796	Bos_taurus
ENSPMAG00000001085	-	100	49.436	ENSCJAG00000004889	ZC3H7B	55	49.436	Callithrix_jacchus
ENSPMAG00000001085	-	100	51.229	ENSCJAG00000008403	ZC3H7A	54	51.229	Callithrix_jacchus
ENSPMAG00000001085	-	100	49.248	ENSCAFG00020002005	ZC3H7B	54	49.248	Canis_lupus_dingo
ENSPMAG00000001085	-	100	49.156	ENSCHIG00000020469	ZC3H7B	55	49.060	Capra_hircus
ENSPMAG00000001085	-	100	51.796	ENSCHIG00000006568	ZC3H7A	54	51.796	Capra_hircus
ENSPMAG00000001085	-	100	49.248	ENSTSYG00000030241	ZC3H7B	54	49.248	Carlito_syrichta
ENSPMAG00000001085	-	93	47.887	ENSCAPG00000017095	ZC3H7B	50	47.887	Cavia_aperea
ENSPMAG00000001085	-	100	49.248	ENSCPOG00000004413	ZC3H7B	53	49.248	Cavia_porcellus
ENSPMAG00000001085	-	100	51.229	ENSCCAG00000030033	ZC3H7A	89	46.452	Cebus_capucinus
ENSPMAG00000001085	-	100	49.248	ENSCCAG00000027974	ZC3H7B	55	49.248	Cebus_capucinus
ENSPMAG00000001085	-	100	51.040	ENSCATG00000039664	ZC3H7A	56	51.040	Cercocebus_atys
ENSPMAG00000001085	-	100	49.436	ENSCATG00000037774	ZC3H7B	54	49.436	Cercocebus_atys
ENSPMAG00000001085	-	100	49.248	ENSCLAG00000015052	ZC3H7B	54	49.248	Chinchilla_lanigera
ENSPMAG00000001085	-	100	51.040	ENSCSAG00000008311	ZC3H7A	53	51.040	Chlorocebus_sabaeus
ENSPMAG00000001085	-	100	49.436	ENSCSAG00000005824	ZC3H7B	55	49.436	Chlorocebus_sabaeus
ENSPMAG00000001085	-	100	49.153	ENSCPBG00000020560	ZC3H7B	53	49.153	Chrysemys_picta_bellii
ENSPMAG00000001085	-	100	52.841	ENSCPBG00000006571	ZC3H7A	54	52.841	Chrysemys_picta_bellii
ENSPMAG00000001085	-	100	35.846	ENSCING00000009532	-	63	35.846	Ciona_intestinalis
ENSPMAG00000001085	-	100	35.110	ENSCSAVG00000010311	-	99	35.110	Ciona_savignyi
ENSPMAG00000001085	-	100	51.040	ENSCANG00000035347	ZC3H7A	54	51.040	Colobus_angolensis_palliatus
ENSPMAG00000001085	-	100	49.436	ENSCANG00000032775	ZC3H7B	54	49.436	Colobus_angolensis_palliatus
ENSPMAG00000001085	-	100	49.248	ENSCGRG00001022924	Zc3h7b	54	49.248	Cricetulus_griseus_chok1gshd
ENSPMAG00000001085	-	100	50.564	ENSCGRG00001020639	Zc3h7a	54	50.564	Cricetulus_griseus_chok1gshd
ENSPMAG00000001085	-	100	49.248	ENSCGRG00000005073	Zc3h7b	54	49.248	Cricetulus_griseus_crigri
ENSPMAG00000001085	-	100	50.564	ENSCGRG00000004146	Zc3h7a	54	50.564	Cricetulus_griseus_crigri
ENSPMAG00000001085	-	99	42.935	ENSCSEG00000006655	ZC3H7B	50	42.935	Cynoglossus_semilaevis
ENSPMAG00000001085	-	100	44.821	ENSDARG00000098540	zc3h7ba	58	44.821	Danio_rerio
ENSPMAG00000001085	-	100	49.248	ENSDNOG00000007676	ZC3H7B	54	49.248	Dasypus_novemcinctus
ENSPMAG00000001085	-	100	51.040	ENSDNOG00000009621	ZC3H7A	54	51.040	Dasypus_novemcinctus
ENSPMAG00000001085	-	100	49.436	ENSDORG00000013794	Zc3h7b	55	49.436	Dipodomys_ordii
ENSPMAG00000001085	-	99	45.660	ENSEBUG00000014132	-	55	45.660	Eptatretus_burgeri
ENSPMAG00000001085	-	100	42.561	ENSEBUG00000016536	-	72	42.561	Eptatretus_burgeri
ENSPMAG00000001085	-	100	49.248	ENSEASG00005001577	ZC3H7B	54	49.248	Equus_asinus_asinus
ENSPMAG00000001085	-	100	51.607	ENSEASG00005011504	ZC3H7A	54	51.607	Equus_asinus_asinus
ENSPMAG00000001085	-	100	49.248	ENSECAG00000010103	ZC3H7B	54	49.248	Equus_caballus
ENSPMAG00000001085	-	100	51.796	ENSECAG00000003869	ZC3H7A	54	51.796	Equus_caballus
ENSPMAG00000001085	-	85	51.556	ENSEEUG00000014521	ZC3H7A	57	51.556	Erinaceus_europaeus
ENSPMAG00000001085	-	100	49.248	ENSEEUG00000008452	ZC3H7B	53	49.248	Erinaceus_europaeus
ENSPMAG00000001085	-	93	45.079	ENSELUG00000007682	ZC3H7B	61	44.882	Esox_lucius
ENSPMAG00000001085	-	100	49.248	ENSFCAG00000003670	ZC3H7B	54	49.248	Felis_catus
ENSPMAG00000001085	-	100	51.705	ENSFALG00000003931	ZC3H7A	54	51.705	Ficedula_albicollis
ENSPMAG00000001085	-	100	49.812	ENSFALG00000011968	ZC3H7B	52	49.812	Ficedula_albicollis
ENSPMAG00000001085	-	100	49.436	ENSFDAG00000009991	ZC3H7B	54	49.436	Fukomys_damarensis
ENSPMAG00000001085	-	99	42.435	ENSFHEG00000020629	ZC3H7B	63	42.435	Fundulus_heteroclitus
ENSPMAG00000001085	-	100	49.906	ENSGALG00000011965	ZC3H7B	52	49.906	Gallus_gallus
ENSPMAG00000001085	-	100	51.894	ENSGALG00000003143	ZC3H7A	54	51.894	Gallus_gallus
ENSPMAG00000001085	-	99	40.984	ENSGAFG00000010829	ZC3H7B	52	41.530	Gambusia_affinis
ENSPMAG00000001085	-	100	52.363	ENSGAGG00000013068	ZC3H7A	61	52.363	Gopherus_agassizii
ENSPMAG00000001085	-	100	49.719	ENSGAGG00000008803	ZC3H7B	53	49.719	Gopherus_agassizii
ENSPMAG00000001085	-	100	50.473	ENSGGOG00000009732	ZC3H7A	55	50.473	Gorilla_gorilla
ENSPMAG00000001085	-	100	49.436	ENSGGOG00000014138	ZC3H7B	54	49.436	Gorilla_gorilla
ENSPMAG00000001085	-	100	51.136	ENSHGLG00000008151	ZC3H7A	54	51.136	Heterocephalus_glaber_female
ENSPMAG00000001085	-	100	49.060	ENSHGLG00000012263	ZC3H7B	54	49.060	Heterocephalus_glaber_female
ENSPMAG00000001085	-	100	51.136	ENSHGLG00100015688	ZC3H7A	54	51.136	Heterocephalus_glaber_male
ENSPMAG00000001085	-	100	48.593	ENSHGLG00100007729	ZC3H7B	50	48.593	Heterocephalus_glaber_male
ENSPMAG00000001085	-	91	37.698	ENSHCOG00000014089	-	53	37.698	Hippocampus_comes
ENSPMAG00000001085	-	100	48.496	ENSHCOG00000006592	zc3h7a	53	48.593	Hippocampus_comes
ENSPMAG00000001085	-	96	45.203	ENSIPUG00000019805	zc3h7ba	61	44.405	Ictalurus_punctatus
ENSPMAG00000001085	-	100	51.316	ENSSTOG00000005596	ZC3H7A	54	51.316	Ictidomys_tridecemlineatus
ENSPMAG00000001085	-	100	49.248	ENSSTOG00000016196	ZC3H7B	54	49.248	Ictidomys_tridecemlineatus
ENSPMAG00000001085	-	100	49.248	ENSJJAG00000013804	Zc3h7b	54	49.248	Jaculus_jaculus
ENSPMAG00000001085	-	99	43.091	ENSKMAG00000014972	zc3h7ba	52	43.273	Kryptolebias_marmoratus
ENSPMAG00000001085	-	100	45.216	ENSLACG00000013040	ZC3H7B	54	45.216	Latimeria_chalumnae
ENSPMAG00000001085	-	100	42.883	ENSLOCG00000011588	zc3h7bb	55	42.134	Lepisosteus_oculatus
ENSPMAG00000001085	-	100	51.418	ENSLAFG00000004255	ZC3H7A	54	51.418	Loxodonta_africana
ENSPMAG00000001085	-	100	51.040	ENSMFAG00000031501	ZC3H7A	55	51.040	Macaca_fascicularis
ENSPMAG00000001085	-	100	48.023	ENSMFAG00000037965	ZC3H7B	53	48.023	Macaca_fascicularis
ENSPMAG00000001085	-	100	51.040	ENSMMUG00000011242	ZC3H7A	54	51.040	Macaca_mulatta
ENSPMAG00000001085	-	100	49.436	ENSMMUG00000005219	ZC3H7B	54	49.436	Macaca_mulatta
ENSPMAG00000001085	-	100	51.040	ENSMNEG00000035809	ZC3H7A	55	51.040	Macaca_nemestrina
ENSPMAG00000001085	-	100	49.436	ENSMNEG00000036730	ZC3H7B	54	49.436	Macaca_nemestrina
ENSPMAG00000001085	-	100	49.436	ENSMLEG00000037209	ZC3H7B	54	49.436	Mandrillus_leucophaeus
ENSPMAG00000001085	-	100	51.040	ENSMLEG00000031752	ZC3H7A	54	51.040	Mandrillus_leucophaeus
ENSPMAG00000001085	-	99	42.545	ENSMAMG00000007320	ZC3H7B	51	43.510	Mastacembelus_armatus
ENSPMAG00000001085	-	100	51.331	ENSMGAG00000001079	ZC3H7A	53	51.331	Meleagris_gallopavo
ENSPMAG00000001085	-	100	49.341	ENSMGAG00000012234	ZC3H7B	54	49.341	Meleagris_gallopavo
ENSPMAG00000001085	-	100	50.473	ENSMAUG00000000111	Zc3h7a	54	50.473	Mesocricetus_auratus
ENSPMAG00000001085	-	100	49.248	ENSMAUG00000007915	Zc3h7b	54	49.248	Mesocricetus_auratus
ENSPMAG00000001085	-	100	49.248	ENSMICG00000013471	ZC3H7B	54	49.248	Microcebus_murinus
ENSPMAG00000001085	-	100	51.229	ENSMICG00000026523	ZC3H7A	54	51.229	Microcebus_murinus
ENSPMAG00000001085	-	100	49.905	ENSMOCG00000016255	Zc3h7a	54	49.905	Microtus_ochrogaster
ENSPMAG00000001085	-	100	49.248	ENSMOCG00000014855	Zc3h7b	54	49.248	Microtus_ochrogaster
ENSPMAG00000001085	-	97	42.015	ENSMMOG00000002693	ZC3H7B	60	43.083	Mola_mola
ENSPMAG00000001085	-	100	48.308	ENSMODG00000016546	-	75	48.308	Monodelphis_domestica
ENSPMAG00000001085	-	99	44.708	ENSMALG00000013223	ZC3H7B	53	44.708	Monopterus_albus
ENSPMAG00000001085	-	100	49.248	MGP_CAROLIEiJ_G0020058	Zc3h7b	54	49.248	Mus_caroli
ENSPMAG00000001085	-	100	49.248	ENSMUSG00000022390	Zc3h7b	54	49.248	Mus_musculus
ENSPMAG00000001085	-	100	49.248	MGP_PahariEiJ_G0020060	Zc3h7b	54	49.248	Mus_pahari
ENSPMAG00000001085	-	100	49.248	MGP_SPRETEiJ_G0020956	Zc3h7b	54	49.248	Mus_spretus
ENSPMAG00000001085	-	100	49.248	ENSMPUG00000016409	ZC3H7B	54	49.248	Mustela_putorius_furo
ENSPMAG00000001085	-	100	49.248	ENSMLUG00000003292	ZC3H7B	58	49.248	Myotis_lucifugus
ENSPMAG00000001085	-	100	51.229	ENSMLUG00000016057	ZC3H7A	54	51.229	Myotis_lucifugus
ENSPMAG00000001085	-	100	49.248	ENSNGAG00000013813	Zc3h7b	54	49.248	Nannospalax_galili
ENSPMAG00000001085	-	99	45.109	ENSNBRG00000003771	ZC3H7B	56	45.109	Neolamprologus_brichardi
ENSPMAG00000001085	-	100	51.040	ENSNLEG00000010179	ZC3H7A	54	51.040	Nomascus_leucogenys
ENSPMAG00000001085	-	100	49.436	ENSNLEG00000015470	ZC3H7B	57	49.436	Nomascus_leucogenys
ENSPMAG00000001085	-	100	48.204	ENSMEUG00000014072	ZC3H7B	55	48.204	Notamacropus_eugenii
ENSPMAG00000001085	-	100	49.436	ENSOPRG00000013540	ZC3H7B	53	49.436	Ochotona_princeps
ENSPMAG00000001085	-	100	49.248	ENSODEG00000012411	ZC3H7B	56	49.248	Octodon_degus
ENSPMAG00000001085	-	100	49.060	ENSOCUG00000002712	ZC3H7B	54	48.308	Oryctolagus_cuniculus
ENSPMAG00000001085	-	99	43.920	ENSORLG00000014127	ZC3H7B	53	43.920	Oryzias_latipes
ENSPMAG00000001085	-	99	43.796	ENSORLG00020007911	ZC3H7B	53	43.796	Oryzias_latipes_hni
ENSPMAG00000001085	-	99	44.963	ENSORLG00015019109	ZC3H7B	63	44.860	Oryzias_latipes_hsok
ENSPMAG00000001085	-	99	44.037	ENSOMEG00000005686	ZC3H7B	53	44.037	Oryzias_melastigma
ENSPMAG00000001085	-	100	49.060	ENSOGAG00000008827	ZC3H7B	54	49.060	Otolemur_garnettii
ENSPMAG00000001085	-	100	51.229	ENSOGAG00000010411	ZC3H7A	54	51.229	Otolemur_garnettii
ENSPMAG00000001085	-	100	51.796	ENSOARG00000006808	ZC3H7A	54	51.796	Ovis_aries
ENSPMAG00000001085	-	100	49.436	ENSPPAG00000034228	ZC3H7B	54	49.436	Pan_paniscus
ENSPMAG00000001085	-	100	51.040	ENSPPAG00000027430	ZC3H7A	54	51.040	Pan_paniscus
ENSPMAG00000001085	-	100	49.248	ENSPPRG00000006647	ZC3H7B	54	49.248	Panthera_pardus
ENSPMAG00000001085	-	100	49.248	ENSPTIG00000013113	ZC3H7B	54	49.248	Panthera_tigris_altaica
ENSPMAG00000001085	-	100	49.436	ENSPTRG00000014424	ZC3H7B	55	49.436	Pan_troglodytes
ENSPMAG00000001085	-	100	51.040	ENSPTRG00000007776	ZC3H7A	55	51.040	Pan_troglodytes
ENSPMAG00000001085	-	100	49.436	ENSPANG00000019690	ZC3H7B	54	49.436	Papio_anubis
ENSPMAG00000001085	-	100	51.040	ENSPANG00000015185	ZC3H7A	55	51.040	Papio_anubis
ENSPMAG00000001085	-	100	48.221	ENSPKIG00000008681	ZC3H7B	56	48.577	Paramormyrops_kingsleyae
ENSPMAG00000001085	-	93	49.894	ENSPKIG00000003219	zc3h7bb	68	50.211	Paramormyrops_kingsleyae
ENSPMAG00000001085	-	100	52.642	ENSPSIG00000011280	ZC3H7A	53	52.642	Pelodiscus_sinensis
ENSPMAG00000001085	-	100	48.211	ENSPSIG00000005743	ZC3H7B	54	48.211	Pelodiscus_sinensis
ENSPMAG00000001085	-	97	39.579	ENSPMGG00000017941	ZC3H7B	69	39.579	Periophthalmus_magnuspinnatus
ENSPMAG00000001085	-	100	49.624	ENSPEMG00000023990	Zc3h7b	55	49.624	Peromyscus_maniculatus_bairdii
ENSPMAG00000001085	-	99	42.987	ENSPLAG00000017361	ZC3H7B	53	43.557	Poecilia_latipinna
ENSPMAG00000001085	-	99	43.510	ENSPMEG00000018149	ZC3H7B	53	43.510	Poecilia_mexicana
ENSPMAG00000001085	-	99	42.623	ENSPREG00000017699	ZC3H7B	53	43.194	Poecilia_reticulata
ENSPMAG00000001085	-	100	49.436	ENSPPYG00000011866	ZC3H7B	54	49.436	Pongo_abelii
ENSPMAG00000001085	-	100	51.040	ENSPPYG00000007111	ZC3H7A	54	51.040	Pongo_abelii
ENSPMAG00000001085	-	97	51.367	ENSPCAG00000000183	ZC3H7A	54	51.367	Procavia_capensis
ENSPMAG00000001085	-	93	48.394	ENSPCAG00000009517	ZC3H7B	50	48.394	Procavia_capensis
ENSPMAG00000001085	-	100	49.248	ENSPCOG00000024031	ZC3H7B	54	49.248	Propithecus_coquereli
ENSPMAG00000001085	-	100	51.040	ENSPVAG00000015398	ZC3H7A	54	51.040	Pteropus_vampyrus
ENSPMAG00000001085	-	100	49.060	ENSPVAG00000001159	ZC3H7B	53	49.060	Pteropus_vampyrus
ENSPMAG00000001085	-	99	41.894	ENSPNYG00000024065	ZC3H7B	63	42.491	Pundamilia_nyererei
ENSPMAG00000001085	-	96	43.510	ENSPNAG00000013903	zc3h7ba	56	43.134	Pygocentrus_nattereri
ENSPMAG00000001085	-	100	49.248	ENSRNOG00000055925	Zc3h7b	54	49.248	Rattus_norvegicus
ENSPMAG00000001085	-	100	50.095	ENSRNOG00000002420	Zc3h7a	54	50.095	Rattus_norvegicus
ENSPMAG00000001085	-	100	51.040	ENSRBIG00000025104	ZC3H7A	54	51.040	Rhinopithecus_bieti
ENSPMAG00000001085	-	100	49.436	ENSRBIG00000013333	ZC3H7B	54	49.436	Rhinopithecus_bieti
ENSPMAG00000001085	-	100	51.040	ENSRROG00000016165	ZC3H7A	54	51.040	Rhinopithecus_roxellana
ENSPMAG00000001085	-	100	49.436	ENSRROG00000033899	ZC3H7B	54	49.436	Rhinopithecus_roxellana
ENSPMAG00000001085	-	100	51.229	ENSSBOG00000025443	ZC3H7A	55	51.229	Saimiri_boliviensis_boliviensis
ENSPMAG00000001085	-	100	49.906	ENSSHAG00000008653	ZC3H7B	55	49.906	Sarcophilus_harrisii
ENSPMAG00000001085	-	100	47.140	ENSSFOG00015011477	zc3h7b	57	47.140	Scleropages_formosus
ENSPMAG00000001085	-	99	40.968	ENSSLDG00000018333	ZC3H7B	74	41.341	Seriola_lalandi_dorsalis
ENSPMAG00000001085	-	100	48.872	ENSSPUG00000011490	ZC3H7B	54	49.248	Sphenodon_punctatus
ENSPMAG00000001085	-	99	44.526	ENSSPAG00000017788	ZC3H7B	53	44.526	Stegastes_partitus
ENSPMAG00000001085	-	100	49.060	ENSSSCG00000033036	ZC3H7B	54	49.060	Sus_scrofa
ENSPMAG00000001085	-	100	49.812	ENSTGUG00000009946	ZC3H7B	55	49.812	Taeniopygia_guttata
ENSPMAG00000001085	-	100	51.326	ENSTGUG00000004910	ZC3H7A	53	51.326	Taeniopygia_guttata
ENSPMAG00000001085	-	99	43.258	ENSTRUG00000002273	ZC3H7B	74	42.264	Takifugu_rubripes
ENSPMAG00000001085	-	100	49.248	ENSTTRG00000003362	ZC3H7B	53	49.248	Tursiops_truncatus
ENSPMAG00000001085	-	100	49.060	ENSUAMG00000026203	ZC3H7B	54	49.060	Ursus_americanus
ENSPMAG00000001085	-	100	43.609	ENSUMAG00000021049	ZC3H7B	54	43.609	Ursus_maritimus
ENSPMAG00000001085	-	100	49.248	ENSVVUG00000003660	ZC3H7B	54	49.248	Vulpes_vulpes
ENSPMAG00000001085	-	99	46.314	ENSXETG00000006332	zc3h7b	54	46.314	Xenopus_tropicalis
ENSPMAG00000001085	-	99	47.826	ENSXETG00000016617	zc3h7a	52	47.826	Xenopus_tropicalis
ENSPMAG00000001085	-	99	41.712	ENSXMAG00000022258	ZC3H7B	52	42.077	Xiphophorus_maculatus