EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001291 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: -
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 9095 bases
Position: chrGL477135:549787-558881
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001423	THUMP	PF02926.17	7.5e-14	1	1
ENSPMAP00000001427	THUMP	PF02926.17	9.5e-14	1	1
ENSPMAP00000001423	UPF0020	PF01170.18	4.5e-25	1	1
ENSPMAP00000001427	UPF0020	PF01170.18	8.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001429	-	1311	-	ENSPMAP00000001423	437 (aa)	-	S4R892
ENSPMAT00000001433	-	1431	-	ENSPMAP00000001427	477 (aa)	-	S4R896

Gene Model

Click here to download ENSPMAG00000001291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001291	thumpd3	100	51.820	ENSG00000134077	THUMPD3	92	52.401	Homo_sapiens
ENSPMAG00000001291	thumpd3	98	53.604	ENSAPOG00000015836	thumpd3	90	53.548	Acanthochromis_polyacanthus
ENSPMAG00000001291	thumpd3	99	54.405	ENSAMEG00000011321	THUMPD3	92	53.099	Ailuropoda_melanoleuca
ENSPMAG00000001291	thumpd3	99	52.203	ENSACIG00000020096	thumpd3	88	53.708	Amphilophus_citrinellus
ENSPMAG00000001291	thumpd3	98	53.829	ENSAOCG00000004399	thumpd3	88	53.548	Amphiprion_ocellaris
ENSPMAG00000001291	thumpd3	98	54.054	ENSAPEG00000016740	thumpd3	87	54.054	Amphiprion_percula
ENSPMAG00000001291	thumpd3	98	54.670	ENSATEG00000005345	thumpd3	87	54.670	Anabas_testudineus
ENSPMAG00000001291	thumpd3	86	51.478	ENSAPLG00000003598	THUMPD3	99	52.525	Anas_platyrhynchos
ENSPMAG00000001291	thumpd3	98	50.210	ENSACAG00000014974	THUMPD3	91	51.875	Anolis_carolinensis
ENSPMAG00000001291	thumpd3	100	52.632	ENSANAG00000002365	THUMPD3	92	51.423	Aotus_nancymaae
ENSPMAG00000001291	thumpd3	71	63.636	ENSACLG00000013504	-	74	61.728	Astatotilapia_calliptera
ENSPMAG00000001291	thumpd3	99	54.402	ENSACLG00000023333	thumpd3	88	54.402	Astatotilapia_calliptera
ENSPMAG00000001291	thumpd3	98	56.054	ENSAMXG00000015683	thumpd3	96	53.027	Astyanax_mexicanus
ENSPMAG00000001291	thumpd3	99	53.402	ENSBTAG00000003112	THUMPD3	92	53.402	Bos_taurus
ENSPMAG00000001291	thumpd3	96	31.935	WBGene00010846	M04B2.2	96	32.401	Caenorhabditis_elegans
ENSPMAG00000001291	thumpd3	100	51.398	ENSCJAG00000015949	THUMPD3	92	51.775	Callithrix_jacchus
ENSPMAG00000001291	thumpd3	85	51.250	ENSCAFG00000008060	-	93	52.405	Canis_familiaris
ENSPMAG00000001291	thumpd3	99	53.556	ENSCAFG00000005499	THUMPD3	92	53.445	Canis_familiaris
ENSPMAG00000001291	thumpd3	99	53.556	ENSCAFG00020008895	-	92	53.445	Canis_lupus_dingo
ENSPMAG00000001291	thumpd3	89	52.558	ENSCAFG00020025887	-	96	52.436	Canis_lupus_dingo
ENSPMAG00000001291	thumpd3	99	53.813	ENSCHIG00000024037	THUMPD3	92	53.750	Capra_hircus
ENSPMAG00000001291	thumpd3	99	51.143	ENSTSYG00000000159	THUMPD3	92	51.429	Carlito_syrichta
ENSPMAG00000001291	thumpd3	69	37.048	ENSCAPG00000017486	THUMPD3	63	37.048	Cavia_aperea
ENSPMAG00000001291	thumpd3	100	51.340	ENSCPOG00000033287	THUMPD3	93	51.340	Cavia_porcellus
ENSPMAG00000001291	thumpd3	100	51.613	ENSCCAG00000027067	-	92	51.983	Cebus_capucinus
ENSPMAG00000001291	thumpd3	99	47.216	ENSCCAG00000021429	-	93	46.667	Cebus_capucinus
ENSPMAG00000001291	thumpd3	100	51.483	ENSCATG00000040999	THUMPD3	92	51.983	Cercocebus_atys
ENSPMAG00000001291	thumpd3	98	53.930	ENSCLAG00000000690	THUMPD3	90	54.255	Chinchilla_lanigera
ENSPMAG00000001291	thumpd3	100	52.495	ENSCSAG00000010753	THUMPD3	92	51.983	Chlorocebus_sabaeus
ENSPMAG00000001291	thumpd3	85	46.667	ENSCHOG00000012851	THUMPD3	76	43.902	Choloepus_hoffmanni
ENSPMAG00000001291	thumpd3	98	51.606	ENSCPBG00000014771	THUMPD3	90	52.866	Chrysemys_picta_bellii
ENSPMAG00000001291	thumpd3	98	36.322	ENSCSAVG00000008668	-	97	34.914	Ciona_savignyi
ENSPMAG00000001291	thumpd3	100	52.061	ENSCANG00000031901	THUMPD3	92	51.566	Colobus_angolensis_palliatus
ENSPMAG00000001291	thumpd3	100	52.469	ENSCGRG00001024117	Thumpd3	93	52.469	Cricetulus_griseus_chok1gshd
ENSPMAG00000001291	thumpd3	100	52.469	ENSCGRG00000018116	Thumpd3	93	52.469	Cricetulus_griseus_crigri
ENSPMAG00000001291	thumpd3	98	52.667	ENSCSEG00000002546	thumpd3	90	52.442	Cynoglossus_semilaevis
ENSPMAG00000001291	thumpd3	98	54.214	ENSCVAG00000001019	thumpd3	86	53.986	Cyprinodon_variegatus
ENSPMAG00000001291	thumpd3	100	52.902	ENSDARG00000059634	thumpd3	93	53.020	Danio_rerio
ENSPMAG00000001291	thumpd3	99	52.495	ENSDNOG00000047668	THUMPD3	88	54.681	Dasypus_novemcinctus
ENSPMAG00000001291	thumpd3	98	53.863	ENSDORG00000003257	Thumpd3	92	51.667	Dipodomys_ordii
ENSPMAG00000001291	thumpd3	63	51.890	ENSETEG00000020239	-	56	52.475	Echinops_telfairi
ENSPMAG00000001291	thumpd3	95	52.765	ENSEBUG00000004221	thumpd3	95	52.620	Eptatretus_burgeri
ENSPMAG00000001291	thumpd3	99	51.245	ENSEASG00005013327	THUMPD3	92	51.245	Equus_asinus_asinus
ENSPMAG00000001291	thumpd3	99	53.527	ENSECAG00000002016	THUMPD3	92	53.527	Equus_caballus
ENSPMAG00000001291	thumpd3	99	52.759	ENSEEUG00000014696	THUMPD3	90	52.411	Erinaceus_europaeus
ENSPMAG00000001291	thumpd3	91	60.806	ENSELUG00000018246	thumpd3	70	61.321	Esox_lucius
ENSPMAG00000001291	thumpd3	99	54.525	ENSFCAG00000006171	THUMPD3	92	53.416	Felis_catus
ENSPMAG00000001291	thumpd3	91	52.000	ENSFALG00000013631	THUMPD3	89	52.055	Ficedula_albicollis
ENSPMAG00000001291	thumpd3	100	52.990	ENSFDAG00000014825	THUMPD3	93	52.784	Fukomys_damarensis
ENSPMAG00000001291	thumpd3	98	53.318	ENSFHEG00000006006	thumpd3	88	51.828	Fundulus_heteroclitus
ENSPMAG00000001291	thumpd3	99	53.348	ENSGMOG00000007923	thumpd3	92	52.610	Gadus_morhua
ENSPMAG00000001291	thumpd3	99	51.064	ENSGALG00000044813	THUMPD3	95	51.277	Gallus_gallus
ENSPMAG00000001291	thumpd3	98	54.233	ENSGAFG00000021645	thumpd3	90	52.301	Gambusia_affinis
ENSPMAG00000001291	thumpd3	99	54.157	ENSGACG00000000930	thumpd3	93	53.258	Gasterosteus_aculeatus
ENSPMAG00000001291	thumpd3	98	50.972	ENSGAGG00000022750	THUMPD3	90	51.599	Gopherus_agassizii
ENSPMAG00000001291	thumpd3	100	52.268	ENSGGOG00000000604	THUMPD3	92	52.401	Gorilla_gorilla
ENSPMAG00000001291	thumpd3	99	54.402	ENSHBUG00000013405	thumpd3	88	54.402	Haplochromis_burtoni
ENSPMAG00000001291	thumpd3	100	52.490	ENSHGLG00000016200	THUMPD3	93	52.282	Heterocephalus_glaber_female
ENSPMAG00000001291	thumpd3	100	52.381	ENSHGLG00100017321	-	93	52.381	Heterocephalus_glaber_male
ENSPMAG00000001291	thumpd3	98	51.264	ENSHGLG00100000505	-	91	51.264	Heterocephalus_glaber_male
ENSPMAG00000001291	thumpd3	98	54.831	ENSHCOG00000004871	thumpd3	92	53.017	Hippocampus_comes
ENSPMAG00000001291	thumpd3	98	55.319	ENSIPUG00000019415	THUMPD3	91	54.008	Ictalurus_punctatus
ENSPMAG00000001291	thumpd3	100	53.333	ENSSTOG00000003973	THUMPD3	93	52.546	Ictidomys_tridecemlineatus
ENSPMAG00000001291	thumpd3	98	55.149	ENSJJAG00000017751	Thumpd3	89	53.219	Jaculus_jaculus
ENSPMAG00000001291	thumpd3	98	53.258	ENSKMAG00000021025	thumpd3	83	52.473	Kryptolebias_marmoratus
ENSPMAG00000001291	thumpd3	100	52.759	ENSLBEG00000012252	thumpd3	88	52.539	Labrus_bergylta
ENSPMAG00000001291	thumpd3	100	53.205	ENSLACG00000018604	THUMPD3	90	55.085	Latimeria_chalumnae
ENSPMAG00000001291	thumpd3	99	51.717	ENSLOCG00000009800	thumpd3	94	53.219	Lepisosteus_oculatus
ENSPMAG00000001291	thumpd3	99	53.527	ENSLAFG00000005103	THUMPD3	93	53.402	Loxodonta_africana
ENSPMAG00000001291	thumpd3	100	52.495	ENSMFAG00000044884	THUMPD3	92	51.983	Macaca_fascicularis
ENSPMAG00000001291	thumpd3	100	52.495	ENSMMUG00000017307	THUMPD3	92	51.983	Macaca_mulatta
ENSPMAG00000001291	thumpd3	100	52.495	ENSMNEG00000030529	THUMPD3	92	51.983	Macaca_nemestrina
ENSPMAG00000001291	thumpd3	100	51.702	ENSMLEG00000032943	THUMPD3	92	51.983	Mandrillus_leucophaeus
ENSPMAG00000001291	thumpd3	99	51.910	ENSMAMG00000023934	thumpd3	89	51.368	Mastacembelus_armatus
ENSPMAG00000001291	thumpd3	99	54.402	ENSMZEG00005010623	thumpd3	88	54.402	Maylandia_zebra
ENSPMAG00000001291	thumpd3	86	53.365	ENSMGAG00000010182	THUMPD3	100	52.745	Meleagris_gallopavo
ENSPMAG00000001291	thumpd3	100	52.784	ENSMAUG00000012250	Thumpd3	93	52.784	Mesocricetus_auratus
ENSPMAG00000001291	thumpd3	100	51.153	ENSMICG00000010095	THUMPD3	90	51.153	Microcebus_murinus
ENSPMAG00000001291	thumpd3	100	52.965	ENSMOCG00000020148	Thumpd3	93	52.965	Microtus_ochrogaster
ENSPMAG00000001291	thumpd3	99	53.571	ENSMMOG00000021791	thumpd3	92	52.632	Mola_mola
ENSPMAG00000001291	thumpd3	99	51.653	ENSMODG00000004715	-	93	51.653	Monodelphis_domestica
ENSPMAG00000001291	thumpd3	99	51.770	ENSMALG00000017316	thumpd3	93	51.333	Monopterus_albus
ENSPMAG00000001291	thumpd3	62	52.595	MGP_CAROLIEiJ_G0028714	-	59	52.595	Mus_caroli
ENSPMAG00000001291	thumpd3	100	52.697	ENSMUSG00000030264	Thumpd3	93	52.697	Mus_musculus
ENSPMAG00000001291	thumpd3	100	52.490	MGP_PahariEiJ_G0022465	Thumpd3	93	52.490	Mus_pahari
ENSPMAG00000001291	thumpd3	100	52.697	MGP_SPRETEiJ_G0029742	Thumpd3	93	52.697	Mus_spretus
ENSPMAG00000001291	thumpd3	99	53.659	ENSMPUG00000017066	-	92	53.878	Mustela_putorius_furo
ENSPMAG00000001291	thumpd3	99	48.884	ENSMPUG00000005219	-	92	48.340	Mustela_putorius_furo
ENSPMAG00000001291	thumpd3	99	51.193	ENSMLUG00000008538	THUMPD3	91	50.936	Myotis_lucifugus
ENSPMAG00000001291	thumpd3	98	53.602	ENSNGAG00000021014	-	91	54.008	Nannospalax_galili
ENSPMAG00000001291	thumpd3	99	48.864	ENSNGAG00000001549	-	88	48.636	Nannospalax_galili
ENSPMAG00000001291	thumpd3	99	54.176	ENSNBRG00000004886	thumpd3	88	54.176	Neolamprologus_brichardi
ENSPMAG00000001291	thumpd3	100	51.599	ENSNLEG00000003863	THUMPD3	92	52.192	Nomascus_leucogenys
ENSPMAG00000001291	thumpd3	89	50.577	ENSMEUG00000009819	THUMPD3	98	50.577	Notamacropus_eugenii
ENSPMAG00000001291	thumpd3	87	53.865	ENSOPRG00000002020	THUMPD3	97	52.246	Ochotona_princeps
ENSPMAG00000001291	thumpd3	76	51.087	ENSODEG00000018242	THUMPD3	100	51.087	Octodon_degus
ENSPMAG00000001291	thumpd3	99	53.741	ENSONIG00000018977	thumpd3	88	53.725	Oreochromis_niloticus
ENSPMAG00000001291	thumpd3	89	49.431	ENSOANG00000014481	THUMPD3	98	49.545	Ornithorhynchus_anatinus
ENSPMAG00000001291	thumpd3	98	53.540	ENSOCUG00000010921	THUMPD3	92	53.416	Oryctolagus_cuniculus
ENSPMAG00000001291	thumpd3	99	55.257	ENSORLG00000000676	thumpd3	90	54.362	Oryzias_latipes
ENSPMAG00000001291	thumpd3	50	32.035	ENSORLG00020018792	thumpd2	52	32.468	Oryzias_latipes_hni
ENSPMAG00000001291	thumpd3	99	55.257	ENSORLG00020007509	thumpd3	90	54.362	Oryzias_latipes_hni
ENSPMAG00000001291	thumpd3	99	55.481	ENSORLG00015003615	thumpd3	90	54.586	Oryzias_latipes_hsok
ENSPMAG00000001291	thumpd3	98	54.920	ENSOMEG00000014115	thumpd3	88	54.920	Oryzias_melastigma
ENSPMAG00000001291	thumpd3	88	50.000	ENSOGAG00000017111	THUMPD3	99	49.533	Otolemur_garnettii
ENSPMAG00000001291	thumpd3	99	53.377	ENSOARG00000007139	THUMPD3	89	54.123	Ovis_aries
ENSPMAG00000001291	thumpd3	100	51.820	ENSPPAG00000025852	THUMPD3	92	52.401	Pan_paniscus
ENSPMAG00000001291	thumpd3	99	54.202	ENSPPRG00000008071	THUMPD3	92	54.412	Panthera_pardus
ENSPMAG00000001291	thumpd3	99	54.412	ENSPTIG00000017923	THUMPD3	92	54.412	Panthera_tigris_altaica
ENSPMAG00000001291	thumpd3	100	51.606	ENSPTRG00000014585	THUMPD3	92	52.192	Pan_troglodytes
ENSPMAG00000001291	thumpd3	100	52.278	ENSPANG00000016253	THUMPD3	92	51.775	Papio_anubis
ENSPMAG00000001291	thumpd3	99	53.571	ENSPKIG00000014009	thumpd3	94	52.490	Paramormyrops_kingsleyae
ENSPMAG00000001291	thumpd3	99	50.976	ENSPSIG00000007370	THUMPD3	91	50.976	Pelodiscus_sinensis
ENSPMAG00000001291	thumpd3	98	54.442	ENSPMGG00000017563	thumpd3	96	50.722	Periophthalmus_magnuspinnatus
ENSPMAG00000001291	thumpd3	100	53.608	ENSPEMG00000022411	Thumpd3	93	53.608	Peromyscus_maniculatus_bairdii
ENSPMAG00000001291	thumpd3	99	52.479	ENSPCIG00000002049	THUMPD3	92	52.479	Phascolarctos_cinereus
ENSPMAG00000001291	thumpd3	98	54.382	ENSPFOG00000002318	thumpd3	88	53.664	Poecilia_formosa
ENSPMAG00000001291	thumpd3	98	54.382	ENSPLAG00000014804	thumpd3	88	53.664	Poecilia_latipinna
ENSPMAG00000001291	thumpd3	98	54.382	ENSPMEG00000000582	thumpd3	88	53.664	Poecilia_mexicana
ENSPMAG00000001291	thumpd3	98	54.018	ENSPREG00000009176	thumpd3	87	53.708	Poecilia_reticulata
ENSPMAG00000001291	thumpd3	100	51.606	ENSPPYG00000029461	THUMPD3	92	52.192	Pongo_abelii
ENSPMAG00000001291	thumpd3	96	40.995	ENSPPYG00000017616	-	89	38.972	Pongo_abelii
ENSPMAG00000001291	thumpd3	90	51.954	ENSPCAG00000015398	THUMPD3	99	51.954	Procavia_capensis
ENSPMAG00000001291	thumpd3	100	45.333	ENSPCOG00000018095	-	93	45.175	Propithecus_coquereli
ENSPMAG00000001291	thumpd3	89	48.662	ENSPCOG00000023618	-	93	48.655	Propithecus_coquereli
ENSPMAG00000001291	thumpd3	99	53.053	ENSPVAG00000008721	THUMPD3	92	53.053	Pteropus_vampyrus
ENSPMAG00000001291	thumpd3	99	54.402	ENSPNYG00000006918	thumpd3	88	54.402	Pundamilia_nyererei
ENSPMAG00000001291	thumpd3	98	54.382	ENSPNAG00000014936	thumpd3	91	53.066	Pygocentrus_nattereri
ENSPMAG00000001291	thumpd3	98	53.958	ENSRNOG00000006941	Thumpd3	91	53.958	Rattus_norvegicus
ENSPMAG00000001291	thumpd3	100	52.495	ENSRBIG00000035954	THUMPD3	91	52.495	Rhinopithecus_bieti
ENSPMAG00000001291	thumpd3	100	52.495	ENSRROG00000035734	THUMPD3	91	52.495	Rhinopithecus_roxellana
ENSPMAG00000001291	thumpd3	100	51.627	ENSSBOG00000023567	THUMPD3	94	52.339	Saimiri_boliviensis_boliviensis
ENSPMAG00000001291	thumpd3	100	51.660	ENSSHAG00000014467	THUMPD3	92	51.875	Sarcophilus_harrisii
ENSPMAG00000001291	thumpd3	98	54.989	ENSSFOG00015019210	thumpd3	90	53.863	Scleropages_formosus
ENSPMAG00000001291	thumpd3	98	55.180	ENSSMAG00000000609	thumpd3	92	53.879	Scophthalmus_maximus
ENSPMAG00000001291	thumpd3	99	54.667	ENSSDUG00000012179	thumpd3	91	52.889	Seriola_dumerili
ENSPMAG00000001291	thumpd3	99	53.319	ENSSLDG00000022028	thumpd3	89	52.889	Seriola_lalandi_dorsalis
ENSPMAG00000001291	thumpd3	83	66.187	ENSSARG00000002239	THUMPD3	74	66.187	Sorex_araneus
ENSPMAG00000001291	thumpd3	99	51.789	ENSSPUG00000017461	THUMPD3	92	52.119	Sphenodon_punctatus
ENSPMAG00000001291	thumpd3	98	53.288	ENSSPAG00000008345	thumpd3	87	52.688	Stegastes_partitus
ENSPMAG00000001291	thumpd3	98	53.611	ENSSSCG00000011542	THUMPD3	91	52.854	Sus_scrofa
ENSPMAG00000001291	thumpd3	98	54.810	ENSTGUG00000010440	THUMPD3	100	54.810	Taeniopygia_guttata
ENSPMAG00000001291	thumpd3	98	48.055	ENSTRUG00000004420	thumpd3	90	45.726	Takifugu_rubripes
ENSPMAG00000001291	thumpd3	98	54.128	ENSTNIG00000014627	thumpd3	92	54.817	Tetraodon_nigroviridis
ENSPMAG00000001291	thumpd3	100	48.665	ENSTBEG00000003450	THUMPD3	92	49.278	Tupaia_belangeri
ENSPMAG00000001291	thumpd3	99	53.478	ENSTTRG00000009694	THUMPD3	92	52.311	Tursiops_truncatus
ENSPMAG00000001291	thumpd3	99	54.525	ENSUAMG00000009412	THUMPD3	92	53.669	Ursus_americanus
ENSPMAG00000001291	thumpd3	99	54.730	ENSUMAG00000019241	THUMPD3	92	52.818	Ursus_maritimus
ENSPMAG00000001291	thumpd3	84	50.000	ENSVPAG00000002855	THUMPD3	92	50.000	Vicugna_pacos
ENSPMAG00000001291	thumpd3	99	53.347	ENSVVUG00000025278	THUMPD3	92	53.236	Vulpes_vulpes
ENSPMAG00000001291	thumpd3	99	52.495	ENSXETG00000001447	thumpd3	91	51.627	Xenopus_tropicalis
ENSPMAG00000001291	thumpd3	98	52.860	ENSXCOG00000000159	thumpd3	94	51.883	Xiphophorus_couchianus
ENSPMAG00000001291	thumpd3	98	52.860	ENSXMAG00000001423	thumpd3	90	51.883	Xiphophorus_maculatus