EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001389 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 3575 bases
Position: chrGL484828:206-3780
Accession: ZDB-GENE-040426-1805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001528	THUMP	PF02926.17	1.4e-14	1	1
ENSPMAP00000001527	THUMP	PF02926.17	1.5e-14	1	1
ENSPMAP00000001532	THUMP	PF02926.17	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001539	-	789	-	ENSPMAP00000001532	263 (aa)	-	S4R8K1
ENSPMAT00000001535	-	867	-	ENSPMAP00000001528	211 (aa)	-	S4R8J7
ENSPMAT00000001534	-	888	-	ENSPMAP00000001527	218 (aa)	-	S4R8J6

Gene Model

Click here to download ENSPMAG00000001389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001389	thumpd1	85	56.425	ENSG00000066654	THUMPD1	59	52.404	Homo_sapiens
ENSPMAG00000001389	thumpd1	94	46.748	ENSAPOG00000008440	thumpd1	74	45.763	Acanthochromis_polyacanthus
ENSPMAG00000001389	thumpd1	85	56.983	ENSAMEG00000006257	THUMPD1	51	55.376	Ailuropoda_melanoleuca
ENSPMAG00000001389	thumpd1	81	54.386	ENSACIG00000024395	thumpd1	64	48.309	Amphilophus_citrinellus
ENSPMAG00000001389	thumpd1	81	53.801	ENSAOCG00000003509	thumpd1	68	47.706	Amphiprion_ocellaris
ENSPMAG00000001389	thumpd1	81	53.801	ENSAPEG00000010515	thumpd1	70	47.321	Amphiprion_percula
ENSPMAG00000001389	thumpd1	95	47.143	ENSATEG00000004737	thumpd1	65	47.115	Anabas_testudineus
ENSPMAG00000001389	thumpd1	84	54.098	ENSAPLG00000015259	THUMPD1	66	54.255	Anas_platyrhynchos
ENSPMAG00000001389	thumpd1	74	43.814	ENSACAG00000022881	-	85	47.436	Anolis_carolinensis
ENSPMAG00000001389	thumpd1	81	53.801	ENSACAG00000009625	-	63	51.244	Anolis_carolinensis
ENSPMAG00000001389	thumpd1	85	43.017	ENSANAG00000027040	-	50	41.117	Aotus_nancymaae
ENSPMAG00000001389	thumpd1	97	40.976	ENSANAG00000027311	-	58	42.788	Aotus_nancymaae
ENSPMAG00000001389	thumpd1	85	55.866	ENSANAG00000026882	-	59	50.962	Aotus_nancymaae
ENSPMAG00000001389	thumpd1	81	52.632	ENSACLG00000004830	thumpd1	69	48.198	Astatotilapia_calliptera
ENSPMAG00000001389	thumpd1	92	50.769	ENSAMXG00000012356	thumpd1	60	51.020	Astyanax_mexicanus
ENSPMAG00000001389	thumpd1	85	56.425	ENSBTAG00000047673	THUMPD1	61	50.685	Bos_taurus
ENSPMAG00000001389	thumpd1	85	55.866	ENSCJAG00000009499	THUMPD1	53	54.301	Callithrix_jacchus
ENSPMAG00000001389	thumpd1	85	56.425	ENSCAFG00000017985	THUMPD1	61	51.376	Canis_familiaris
ENSPMAG00000001389	thumpd1	85	56.425	ENSCAFG00020021861	THUMPD1	61	51.376	Canis_lupus_dingo
ENSPMAG00000001389	thumpd1	86	55.801	ENSCHIG00000010134	THUMPD1	61	51.376	Capra_hircus
ENSPMAG00000001389	thumpd1	85	56.983	ENSTSYG00000011537	THUMPD1	55	53.886	Carlito_syrichta
ENSPMAG00000001389	thumpd1	64	55.556	ENSCAPG00000015086	-	86	51.316	Cavia_aperea
ENSPMAG00000001389	thumpd1	84	56.180	ENSCPOG00000008919	-	60	50.935	Cavia_porcellus
ENSPMAG00000001389	thumpd1	84	56.180	ENSCPOG00000023684	-	60	50.935	Cavia_porcellus
ENSPMAG00000001389	thumpd1	85	55.866	ENSCCAG00000030205	THUMPD1	59	51.442	Cebus_capucinus
ENSPMAG00000001389	thumpd1	96	49.754	ENSCCAG00000019379	-	52	50.000	Cebus_capucinus
ENSPMAG00000001389	thumpd1	85	54.749	ENSCATG00000040309	THUMPD1	59	50.962	Cercocebus_atys
ENSPMAG00000001389	thumpd1	97	41.887	ENSCATG00000020844	-	62	44.889	Cercocebus_atys
ENSPMAG00000001389	thumpd1	86	54.696	ENSCLAG00000016508	THUMPD1	61	50.230	Chinchilla_lanigera
ENSPMAG00000001389	thumpd1	85	54.749	ENSCSAG00000007610	THUMPD1	59	50.962	Chlorocebus_sabaeus
ENSPMAG00000001389	thumpd1	86	56.354	ENSCHOG00000005587	THUMPD1	61	51.142	Choloepus_hoffmanni
ENSPMAG00000001389	thumpd1	89	52.941	ENSCPBG00000019055	THUMPD1	54	53.684	Chrysemys_picta_bellii
ENSPMAG00000001389	thumpd1	85	30.890	ENSCING00000021274	-	66	31.217	Ciona_intestinalis
ENSPMAG00000001389	thumpd1	85	54.749	ENSCANG00000038770	THUMPD1	71	50.233	Colobus_angolensis_palliatus
ENSPMAG00000001389	thumpd1	97	41.923	ENSCANG00000035822	-	71	45.205	Colobus_angolensis_palliatus
ENSPMAG00000001389	thumpd1	90	53.500	ENSCGRG00001014829	Thumpd1	55	53.333	Cricetulus_griseus_chok1gshd
ENSPMAG00000001389	thumpd1	90	53.500	ENSCGRG00000000060	Thumpd1	55	53.333	Cricetulus_griseus_crigri
ENSPMAG00000001389	thumpd1	82	53.179	ENSCSEG00000002041	thumpd1	69	46.977	Cynoglossus_semilaevis
ENSPMAG00000001389	thumpd1	83	55.114	ENSCVAG00000014960	thumpd1	63	51.923	Cyprinodon_variegatus
ENSPMAG00000001389	thumpd1	82	58.140	ENSDARG00000100264	thumpd1	55	56.684	Danio_rerio
ENSPMAG00000001389	thumpd1	97	49.772	ENSDNOG00000043510	THUMPD1	61	50.228	Dasypus_novemcinctus
ENSPMAG00000001389	thumpd1	99	52.489	ENSDORG00000028216	Thumpd1	62	52.489	Dipodomys_ordii
ENSPMAG00000001389	thumpd1	81	31.797	FBgn0035532	CG15014	61	34.146	Drosophila_melanogaster
ENSPMAG00000001389	thumpd1	95	41.065	ENSEBUG00000011011	THUMPD1	63	43.966	Eptatretus_burgeri
ENSPMAG00000001389	thumpd1	63	52.273	ENSEASG00005017428	-	75	49.315	Equus_asinus_asinus
ENSPMAG00000001389	thumpd1	97	51.707	ENSECAG00000005354	THUMPD1	53	54.255	Equus_caballus
ENSPMAG00000001389	thumpd1	85	56.983	ENSFCAG00000039296	THUMPD1	63	50.220	Felis_catus
ENSPMAG00000001389	thumpd1	84	54.098	ENSFALG00000014029	THUMPD1	77	50.000	Ficedula_albicollis
ENSPMAG00000001389	thumpd1	81	52.047	ENSFHEG00000013319	thumpd1	61	46.948	Fundulus_heteroclitus
ENSPMAG00000001389	thumpd1	89	56.150	ENSGMOG00000003369	thumpd1	64	53.731	Gadus_morhua
ENSPMAG00000001389	thumpd1	64	55.556	ENSGALG00000031384	-	66	52.778	Gallus_gallus
ENSPMAG00000001389	thumpd1	83	53.409	ENSGAFG00000011000	thumpd1	66	48.815	Gambusia_affinis
ENSPMAG00000001389	thumpd1	82	54.651	ENSGACG00000019511	thumpd1	58	52.083	Gasterosteus_aculeatus
ENSPMAG00000001389	thumpd1	81	55.556	ENSGAGG00000008225	THUMPD1	56	55.801	Gopherus_agassizii
ENSPMAG00000001389	thumpd1	81	52.632	ENSHBUG00000017996	thumpd1	69	47.748	Haplochromis_burtoni
ENSPMAG00000001389	thumpd1	86	55.801	ENSHGLG00000011001	-	59	52.857	Heterocephalus_glaber_female
ENSPMAG00000001389	thumpd1	70	43.919	ENSHGLG00000000952	-	78	42.105	Heterocephalus_glaber_female
ENSPMAG00000001389	thumpd1	86	56.354	ENSHGLG00100016023	THUMPD1	59	53.333	Heterocephalus_glaber_male
ENSPMAG00000001389	thumpd1	70	43.919	ENSHGLG00100010577	-	78	42.105	Heterocephalus_glaber_male
ENSPMAG00000001389	thumpd1	89	53.535	ENSSTOG00000007011	THUMPD1	55	53.368	Ictidomys_tridecemlineatus
ENSPMAG00000001389	thumpd1	96	50.000	ENSJJAG00000004295	-	61	49.767	Jaculus_jaculus
ENSPMAG00000001389	thumpd1	91	47.668	ENSKMAG00000009545	thumpd1	57	44.872	Kryptolebias_marmoratus
ENSPMAG00000001389	thumpd1	85	54.749	ENSLBEG00000009349	thumpd1	67	50.000	Labrus_bergylta
ENSPMAG00000001389	thumpd1	88	55.914	ENSLACG00000005833	THUMPD1	57	53.659	Latimeria_chalumnae
ENSPMAG00000001389	thumpd1	94	43.902	ENSLOCG00000000854	thumpd1	70	45.205	Lepisosteus_oculatus
ENSPMAG00000001389	thumpd1	85	56.425	ENSLAFG00000025838	THUMPD1	61	50.917	Loxodonta_africana
ENSPMAG00000001389	thumpd1	85	54.749	ENSMFAG00000036996	THUMPD1	59	50.962	Macaca_fascicularis
ENSPMAG00000001389	thumpd1	97	40.152	ENSMFAG00000041474	-	71	43.049	Macaca_fascicularis
ENSPMAG00000001389	thumpd1	97	40.152	ENSMMUG00000038414	-	71	43.049	Macaca_mulatta
ENSPMAG00000001389	thumpd1	85	54.749	ENSMMUG00000004225	THUMPD1	59	50.962	Macaca_mulatta
ENSPMAG00000001389	thumpd1	85	54.749	ENSMNEG00000020726	THUMPD1	59	50.962	Macaca_nemestrina
ENSPMAG00000001389	thumpd1	97	40.152	ENSMNEG00000038856	-	71	43.049	Macaca_nemestrina
ENSPMAG00000001389	thumpd1	97	41.065	ENSMLEG00000030012	-	71	43.498	Mandrillus_leucophaeus
ENSPMAG00000001389	thumpd1	85	54.749	ENSMLEG00000036436	THUMPD1	59	50.962	Mandrillus_leucophaeus
ENSPMAG00000001389	thumpd1	98	46.544	ENSMAMG00000006858	thumpd1	64	47.826	Mastacembelus_armatus
ENSPMAG00000001389	thumpd1	81	52.632	ENSMZEG00005013693	thumpd1	69	47.748	Maylandia_zebra
ENSPMAG00000001389	thumpd1	95	51.691	ENSMGAG00000010340	THUMPD1	100	51.942	Meleagris_gallopavo
ENSPMAG00000001389	thumpd1	91	52.970	ENSMAUG00000013306	Thumpd1	61	51.643	Mesocricetus_auratus
ENSPMAG00000001389	thumpd1	85	56.983	ENSMICG00000038483	-	53	55.376	Microcebus_murinus
ENSPMAG00000001389	thumpd1	85	48.045	ENSMICG00000030865	-	59	43.269	Microcebus_murinus
ENSPMAG00000001389	thumpd1	96	53.521	ENSMOCG00000003447	Thumpd1	61	52.558	Microtus_ochrogaster
ENSPMAG00000001389	thumpd1	85	50.273	ENSMMOG00000011323	thumpd1	55	50.273	Mola_mola
ENSPMAG00000001389	thumpd1	81	54.971	ENSMODG00000024776	-	52	53.608	Monodelphis_domestica
ENSPMAG00000001389	thumpd1	81	54.386	ENSMODG00000006971	-	52	53.093	Monodelphis_domestica
ENSPMAG00000001389	thumpd1	81	54.386	ENSMALG00000019522	thumpd1	73	44.978	Monopterus_albus
ENSPMAG00000001389	thumpd1	93	51.220	MGP_CAROLIEiJ_G0030382	Thumpd1	63	50.909	Mus_caroli
ENSPMAG00000001389	thumpd1	96	53.052	ENSMUSG00000030942	Thumpd1	63	51.364	Mus_musculus
ENSPMAG00000001389	thumpd1	96	52.582	MGP_PahariEiJ_G0013593	Thumpd1	59	52.153	Mus_pahari
ENSPMAG00000001389	thumpd1	85	58.659	ENSMLUG00000010547	THUMPD1	62	52.273	Myotis_lucifugus
ENSPMAG00000001389	thumpd1	90	53.731	ENSNGAG00000018643	Thumpd1	56	54.822	Nannospalax_galili
ENSPMAG00000001389	thumpd1	81	52.632	ENSNBRG00000006987	thumpd1	65	47.748	Neolamprologus_brichardi
ENSPMAG00000001389	thumpd1	85	55.866	ENSNLEG00000012369	THUMPD1	59	51.923	Nomascus_leucogenys
ENSPMAG00000001389	thumpd1	86	54.144	ENSODEG00000012360	THUMPD1	59	50.725	Octodon_degus
ENSPMAG00000001389	thumpd1	81	52.047	ENSONIG00000000146	thumpd1	71	48.058	Oreochromis_niloticus
ENSPMAG00000001389	thumpd1	88	50.785	ENSOANG00000014297	THUMPD1	53	51.075	Ornithorhynchus_anatinus
ENSPMAG00000001389	thumpd1	64	52.593	ENSOCUG00000025354	-	80	46.286	Oryctolagus_cuniculus
ENSPMAG00000001389	thumpd1	85	56.983	ENSOCUG00000009895	-	62	51.142	Oryctolagus_cuniculus
ENSPMAG00000001389	thumpd1	85	50.000	ENSORLG00000027557	thumpd1	67	46.829	Oryzias_latipes
ENSPMAG00000001389	thumpd1	88	49.189	ENSORLG00020010206	thumpd1	64	47.291	Oryzias_latipes_hni
ENSPMAG00000001389	thumpd1	88	48.649	ENSORLG00015009581	thumpd1	66	46.078	Oryzias_latipes_hsok
ENSPMAG00000001389	thumpd1	88	48.649	ENSOMEG00000019361	thumpd1	62	47.030	Oryzias_melastigma
ENSPMAG00000001389	thumpd1	87	55.026	ENSOGAG00000026723	THUMPD1	55	53.061	Otolemur_garnettii
ENSPMAG00000001389	thumpd1	85	56.983	ENSOARG00000013107	THUMPD1	61	51.598	Ovis_aries
ENSPMAG00000001389	thumpd1	85	43.575	ENSPPAG00000001653	-	66	40.183	Pan_paniscus
ENSPMAG00000001389	thumpd1	85	56.983	ENSPPRG00000014118	-	61	51.598	Panthera_pardus
ENSPMAG00000001389	thumpd1	85	56.983	ENSPTIG00000013856	-	61	51.598	Panthera_tigris_altaica
ENSPMAG00000001389	thumpd1	85	43.575	ENSPTRG00000046073	-	65	40.183	Pan_troglodytes
ENSPMAG00000001389	thumpd1	85	54.749	ENSPANG00000025507	THUMPD1	59	50.962	Papio_anubis
ENSPMAG00000001389	thumpd1	97	40.152	ENSPANG00000034881	-	71	42.857	Papio_anubis
ENSPMAG00000001389	thumpd1	89	49.741	ENSPKIG00000014491	thumpd1	60	49.741	Paramormyrops_kingsleyae
ENSPMAG00000001389	thumpd1	96	49.296	ENSPSIG00000012430	THUMPD1	66	53.403	Pelodiscus_sinensis
ENSPMAG00000001389	thumpd1	82	54.335	ENSPMGG00000014479	thumpd1	63	54.190	Periophthalmus_magnuspinnatus
ENSPMAG00000001389	thumpd1	83	42.162	ENSPEMG00000002608	-	75	42.162	Peromyscus_maniculatus_bairdii
ENSPMAG00000001389	thumpd1	83	54.237	ENSPFOG00000012649	thumpd1	66	49.763	Poecilia_formosa
ENSPMAG00000001389	thumpd1	83	53.977	ENSPLAG00000000137	thumpd1	63	50.000	Poecilia_latipinna
ENSPMAG00000001389	thumpd1	83	53.977	ENSPMEG00000007750	thumpd1	63	50.000	Poecilia_mexicana
ENSPMAG00000001389	thumpd1	83	53.977	ENSPREG00000000144	thumpd1	62	52.459	Poecilia_reticulata
ENSPMAG00000001389	thumpd1	85	56.425	ENSPPYG00000007160	-	78	51.163	Pongo_abelii
ENSPMAG00000001389	thumpd1	85	57.542	ENSPCAG00000001534	THUMPD1	77	51.835	Procavia_capensis
ENSPMAG00000001389	thumpd1	85	56.983	ENSPCOG00000024663	THUMPD1	56	53.299	Propithecus_coquereli
ENSPMAG00000001389	thumpd1	96	47.465	ENSPVAG00000005659	-	59	47.170	Pteropus_vampyrus
ENSPMAG00000001389	thumpd1	81	40.969	ENSPVAG00000003286	-	65	49.660	Pteropus_vampyrus
ENSPMAG00000001389	thumpd1	81	52.632	ENSPNYG00000007061	thumpd1	68	47.748	Pundamilia_nyererei
ENSPMAG00000001389	thumpd1	82	56.647	ENSPNAG00000024872	thumpd1	67	53.731	Pygocentrus_nattereri
ENSPMAG00000001389	thumpd1	83	44.796	ENSRNOG00000014946	AABR07005588.1	78	51.176	Rattus_norvegicus
ENSPMAG00000001389	thumpd1	84	50.847	ENSRBIG00000040136	-	74	45.662	Rhinopithecus_bieti
ENSPMAG00000001389	thumpd1	85	54.749	ENSRBIG00000040752	THUMPD1	61	50.233	Rhinopithecus_bieti
ENSPMAG00000001389	thumpd1	96	45.813	ENSRROG00000045699	-	74	46.119	Rhinopithecus_roxellana
ENSPMAG00000001389	thumpd1	85	54.749	ENSRROG00000042189	THUMPD1	61	50.233	Rhinopithecus_roxellana
ENSPMAG00000001389	thumpd1	85	55.556	ENSSBOG00000034246	THUMPD1	59	51.442	Saimiri_boliviensis_boliviensis
ENSPMAG00000001389	thumpd1	92	43.983	ENSSHAG00000003853	THUMPD1	58	50.239	Sarcophilus_harrisii
ENSPMAG00000001389	thumpd1	80	43.182	ENSSFOG00015007512	thumpd1	58	43.169	Scleropages_formosus
ENSPMAG00000001389	thumpd1	81	53.801	ENSSMAG00000000723	thumpd1	60	49.746	Scophthalmus_maximus
ENSPMAG00000001389	thumpd1	81	53.216	ENSSDUG00000014502	thumpd1	64	50.000	Seriola_dumerili
ENSPMAG00000001389	thumpd1	81	53.801	ENSSLDG00000007694	thumpd1	64	50.481	Seriola_lalandi_dorsalis
ENSPMAG00000001389	thumpd1	81	56.140	ENSSPUG00000005096	THUMPD1	79	50.350	Sphenodon_punctatus
ENSPMAG00000001389	thumpd1	88	48.052	ENSSPAG00000006993	thumpd1	65	50.239	Stegastes_partitus
ENSPMAG00000001389	thumpd1	85	57.778	ENSSSCG00000024748	THUMPD1	61	52.055	Sus_scrofa
ENSPMAG00000001389	thumpd1	93	49.754	ENSTGUG00000009247	THUMPD1	78	50.000	Taeniopygia_guttata
ENSPMAG00000001389	thumpd1	83	53.977	ENSTRUG00000015656	thumpd1	66	50.000	Takifugu_rubripes
ENSPMAG00000001389	thumpd1	81	53.801	ENSTNIG00000001584	thumpd1	71	50.233	Tetraodon_nigroviridis
ENSPMAG00000001389	thumpd1	85	57.542	ENSTBEG00000005252	THUMPD1	54	51.163	Tupaia_belangeri
ENSPMAG00000001389	thumpd1	85	56.983	ENSTTRG00000016435	THUMPD1	61	52.055	Tursiops_truncatus
ENSPMAG00000001389	thumpd1	67	48.276	ENSUAMG00000005779	-	76	44.571	Ursus_americanus
ENSPMAG00000001389	thumpd1	94	48.235	ENSVPAG00000003422	THUMPD1	62	51.598	Vicugna_pacos
ENSPMAG00000001389	thumpd1	85	56.425	ENSVVUG00000023241	THUMPD1	61	51.598	Vulpes_vulpes
ENSPMAG00000001389	thumpd1	99	48.611	ENSXETG00000005539	thumpd1	74	48.611	Xenopus_tropicalis
ENSPMAG00000001389	thumpd1	55	54.701	ENSXCOG00000016003	thumpd1	78	49.655	Xiphophorus_couchianus
ENSPMAG00000001389	thumpd1	83	53.977	ENSXMAG00000026052	thumpd1	65	49.758	Xiphophorus_maculatus