EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001570 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 3823 bases
Position: chrGL495418:164-3986
Accession: ZDB-GENE-050816-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001729	Exo_endo_phos	PF03372.23	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001738	-	825	-	ENSPMAP00000001729	275 (aa)	-	S4R948

Gene Model

Click here to download ENSPMAG00000001570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001570	tdp2b	96	47.529	ENSG00000111802	TDP2	81	47.148	Homo_sapiens
ENSPMAG00000001570	tdp2b	99	43.173	ENSAPOG00000018379	-	90	42.545	Acanthochromis_polyacanthus
ENSPMAG00000001570	tdp2b	97	47.191	ENSAMEG00000010230	TDP2	90	47.191	Ailuropoda_melanoleuca
ENSPMAG00000001570	tdp2b	58	44.720	ENSAOCG00000010081	-	69	44.654	Amphiprion_ocellaris
ENSPMAG00000001570	tdp2b	96	42.586	ENSAPEG00000004208	-	89	41.948	Amphiprion_percula
ENSPMAG00000001570	tdp2b	96	43.396	ENSATEG00000010663	-	82	42.642	Anabas_testudineus
ENSPMAG00000001570	tdp2b	97	48.315	ENSACAG00000002332	TDP2	69	48.315	Anolis_carolinensis
ENSPMAG00000001570	tdp2b	96	47.909	ENSANAG00000020033	TDP2	68	47.909	Aotus_nancymaae
ENSPMAG00000001570	tdp2b	97	42.164	ENSACLG00000016132	tdp2b	85	42.279	Astatotilapia_calliptera
ENSPMAG00000001570	tdp2b	97	43.284	ENSACLG00000016148	tdp2b	90	42.910	Astatotilapia_calliptera
ENSPMAG00000001570	tdp2b	97	42.164	ENSACLG00000016174	tdp2b	85	42.164	Astatotilapia_calliptera
ENSPMAG00000001570	tdp2b	97	42.593	ENSAMXG00000011775	tdp2b	66	42.222	Astyanax_mexicanus
ENSPMAG00000001570	tdp2b	95	44.487	ENSAMXG00000036549	tdp2a	81	44.487	Astyanax_mexicanus
ENSPMAG00000001570	tdp2b	98	46.840	ENSBTAG00000000365	TDP2	70	46.840	Bos_taurus
ENSPMAG00000001570	tdp2b	95	33.209	WBGene00013405	tdpt-1	67	32.472	Caenorhabditis_elegans
ENSPMAG00000001570	tdp2b	96	48.669	ENSCJAG00000006074	TDP2	81	48.669	Callithrix_jacchus
ENSPMAG00000001570	tdp2b	96	47.909	ENSCJAG00000021963	-	68	47.909	Callithrix_jacchus
ENSPMAG00000001570	tdp2b	97	49.064	ENSCAFG00000010428	TDP2	86	48.315	Canis_familiaris
ENSPMAG00000001570	tdp2b	97	49.064	ENSCAFG00020009994	TDP2	86	48.315	Canis_lupus_dingo
ENSPMAG00000001570	tdp2b	99	46.886	ENSCHIG00000015294	-	87	46.886	Capra_hircus
ENSPMAG00000001570	tdp2b	97	46.442	ENSTSYG00000037199	TDP2	81	46.442	Carlito_syrichta
ENSPMAG00000001570	tdp2b	97	47.940	ENSCPOG00000006390	TDP2	70	47.940	Cavia_porcellus
ENSPMAG00000001570	tdp2b	96	48.669	ENSCCAG00000022734	TDP2	81	48.289	Cebus_capucinus
ENSPMAG00000001570	tdp2b	98	46.691	ENSCATG00000022076	TDP2	84	46.324	Cercocebus_atys
ENSPMAG00000001570	tdp2b	97	47.191	ENSCLAG00000002072	TDP2	70	47.191	Chinchilla_lanigera
ENSPMAG00000001570	tdp2b	98	46.691	ENSCSAG00000007769	TDP2	72	46.691	Chlorocebus_sabaeus
ENSPMAG00000001570	tdp2b	97	47.566	ENSCPBG00000006551	TDP2	64	47.191	Chrysemys_picta_bellii
ENSPMAG00000001570	tdp2b	98	46.691	ENSCANG00000040122	TDP2	84	46.324	Colobus_angolensis_palliatus
ENSPMAG00000001570	tdp2b	97	46.067	ENSCGRG00001000384	Tdp2	67	46.067	Cricetulus_griseus_chok1gshd
ENSPMAG00000001570	tdp2b	97	46.067	ENSCGRG00000010250	Tdp2	72	46.067	Cricetulus_griseus_crigri
ENSPMAG00000001570	tdp2b	99	43.542	ENSCVAG00000003114	tdp2b	71	43.173	Cyprinodon_variegatus
ENSPMAG00000001570	tdp2b	99	43.542	ENSDARG00000035954	tdp2b	67	43.173	Danio_rerio
ENSPMAG00000001570	tdp2b	95	43.893	ENSDARG00000069941	tdp2a	55	43.893	Danio_rerio
ENSPMAG00000001570	tdp2b	97	47.566	ENSDNOG00000044082	TDP2	68	47.566	Dasypus_novemcinctus
ENSPMAG00000001570	tdp2b	96	46.768	ENSETEG00000019096	TDP2	89	46.768	Echinops_telfairi
ENSPMAG00000001570	tdp2b	98	47.212	ENSEBUG00000006535	tdp2a	59	47.212	Eptatretus_burgeri
ENSPMAG00000001570	tdp2b	97	47.940	ENSEASG00005007656	TDP2	69	47.940	Equus_asinus_asinus
ENSPMAG00000001570	tdp2b	97	48.689	ENSECAG00000014264	TDP2	69	47.940	Equus_caballus
ENSPMAG00000001570	tdp2b	97	49.064	ENSEEUG00000010776	TDP2	71	49.064	Erinaceus_europaeus
ENSPMAG00000001570	tdp2b	96	43.774	ENSELUG00000009321	tdp2a	77	43.019	Esox_lucius
ENSPMAG00000001570	tdp2b	97	43.446	ENSELUG00000016449	tdp2b	67	43.071	Esox_lucius
ENSPMAG00000001570	tdp2b	97	48.315	ENSFCAG00000025612	TDP2	69	48.315	Felis_catus
ENSPMAG00000001570	tdp2b	97	46.816	ENSFALG00000004710	TDP2	70	46.067	Ficedula_albicollis
ENSPMAG00000001570	tdp2b	97	48.315	ENSFDAG00000006512	TDP2	87	47.940	Fukomys_damarensis
ENSPMAG00000001570	tdp2b	96	42.264	ENSFHEG00000013560	-	86	41.636	Fundulus_heteroclitus
ENSPMAG00000001570	tdp2b	97	46.442	ENSGALG00000013637	TDP2	68	45.693	Gallus_gallus
ENSPMAG00000001570	tdp2b	97	47.940	ENSGAGG00000002853	TDP2	64	47.191	Gopherus_agassizii
ENSPMAG00000001570	tdp2b	96	47.529	ENSGGOG00000014237	TDP2	81	47.148	Gorilla_gorilla
ENSPMAG00000001570	tdp2b	73	45.500	ENSHBUG00000005421	-	82	45.500	Haplochromis_burtoni
ENSPMAG00000001570	tdp2b	99	43.911	ENSHBUG00000002714	tdp2b	71	43.273	Haplochromis_burtoni
ENSPMAG00000001570	tdp2b	97	48.315	ENSHGLG00000008655	TDP2	71	48.315	Heterocephalus_glaber_female
ENSPMAG00000001570	tdp2b	97	48.315	ENSHGLG00100019087	TDP2	71	48.315	Heterocephalus_glaber_male
ENSPMAG00000001570	tdp2b	99	45.018	ENSIPUG00000013691	tdp2b	68	43.911	Ictalurus_punctatus
ENSPMAG00000001570	tdp2b	97	46.992	ENSJJAG00000021685	Tdp2	72	46.992	Jaculus_jaculus
ENSPMAG00000001570	tdp2b	97	41.948	ENSKMAG00000015485	-	81	41.328	Kryptolebias_marmoratus
ENSPMAG00000001570	tdp2b	97	48.689	ENSLACG00000008852	TDP2	69	47.940	Latimeria_chalumnae
ENSPMAG00000001570	tdp2b	96	44.151	ENSLOCG00000005817	tdp2b	89	44.151	Lepisosteus_oculatus
ENSPMAG00000001570	tdp2b	97	48.315	ENSLAFG00000002567	TDP2	71	48.315	Loxodonta_africana
ENSPMAG00000001570	tdp2b	98	46.691	ENSMFAG00000045296	TDP2	84	46.324	Macaca_fascicularis
ENSPMAG00000001570	tdp2b	98	46.691	ENSMMUG00000009803	TDP2	72	46.691	Macaca_mulatta
ENSPMAG00000001570	tdp2b	98	46.691	ENSMNEG00000038003	TDP2	84	46.324	Macaca_nemestrina
ENSPMAG00000001570	tdp2b	98	46.691	ENSMLEG00000028883	TDP2	84	46.324	Mandrillus_leucophaeus
ENSPMAG00000001570	tdp2b	96	43.019	ENSMAMG00000013654	tdp2b	70	42.264	Mastacembelus_armatus
ENSPMAG00000001570	tdp2b	80	42.466	ENSMZEG00005003980	-	70	42.466	Maylandia_zebra
ENSPMAG00000001570	tdp2b	97	42.164	ENSMZEG00005004126	tdp2b	87	41.791	Maylandia_zebra
ENSPMAG00000001570	tdp2b	97	40.672	ENSMZEG00005004103	tdp2b	85	40.659	Maylandia_zebra
ENSPMAG00000001570	tdp2b	97	43.657	ENSMZEG00005004153	tdp2b	89	43.657	Maylandia_zebra
ENSPMAG00000001570	tdp2b	98	42.593	ENSMZEG00005004055	tdp2b	85	42.701	Maylandia_zebra
ENSPMAG00000001570	tdp2b	97	43.284	ENSMZEG00005004077	tdp2b	86	42.491	Maylandia_zebra
ENSPMAG00000001570	tdp2b	99	44.280	ENSMZEG00005003950	tdp2b	71	44.364	Maylandia_zebra
ENSPMAG00000001570	tdp2b	97	47.191	ENSMGAG00000008014	TDP2	68	46.442	Meleagris_gallopavo
ENSPMAG00000001570	tdp2b	97	46.067	ENSMAUG00000014451	Tdp2	67	46.067	Mesocricetus_auratus
ENSPMAG00000001570	tdp2b	97	46.067	ENSMICG00000000039	TDP2	85	45.693	Microcebus_murinus
ENSPMAG00000001570	tdp2b	97	45.318	ENSMOCG00000002823	Tdp2	67	45.318	Microtus_ochrogaster
ENSPMAG00000001570	tdp2b	84	47.186	ENSMODG00000011653	TDP2	64	49.074	Monodelphis_domestica
ENSPMAG00000001570	tdp2b	97	46.241	ENSMALG00000005368	-	85	45.865	Monopterus_albus
ENSPMAG00000001570	tdp2b	97	46.816	MGP_CAROLIEiJ_G0018354	Tdp2	67	46.816	Mus_caroli
ENSPMAG00000001570	tdp2b	97	46.442	ENSMUSG00000035958	Tdp2	67	46.442	Mus_musculus
ENSPMAG00000001570	tdp2b	97	46.442	MGP_PahariEiJ_G0019417	Tdp2	67	46.442	Mus_pahari
ENSPMAG00000001570	tdp2b	97	46.067	MGP_SPRETEiJ_G0019220	Tdp2	67	46.067	Mus_spretus
ENSPMAG00000001570	tdp2b	97	47.566	ENSMPUG00000004516	TDP2	70	47.566	Mustela_putorius_furo
ENSPMAG00000001570	tdp2b	97	47.940	ENSMLUG00000013506	TDP2	69	48.289	Myotis_lucifugus
ENSPMAG00000001570	tdp2b	96	47.148	ENSNGAG00000001375	Tdp2	67	47.148	Nannospalax_galili
ENSPMAG00000001570	tdp2b	96	47.909	ENSNLEG00000002447	TDP2	79	47.529	Nomascus_leucogenys
ENSPMAG00000001570	tdp2b	97	47.191	ENSOPRG00000016299	TDP2	72	47.191	Ochotona_princeps
ENSPMAG00000001570	tdp2b	97	46.816	ENSODEG00000014018	TDP2	85	46.816	Octodon_degus
ENSPMAG00000001570	tdp2b	97	47.566	ENSOCUG00000013773	TDP2	70	47.566	Oryctolagus_cuniculus
ENSPMAG00000001570	tdp2b	97	40.075	ENSORLG00000001661	-	93	39.700	Oryzias_latipes
ENSPMAG00000001570	tdp2b	97	40.672	ENSORLG00020004634	-	93	40.149	Oryzias_latipes_hni
ENSPMAG00000001570	tdp2b	97	35.206	ENSORLG00015008190	-	92	34.831	Oryzias_latipes_hsok
ENSPMAG00000001570	tdp2b	97	42.007	ENSOMEG00000015899	-	94	41.045	Oryzias_melastigma
ENSPMAG00000001570	tdp2b	97	46.816	ENSOGAG00000025303	TDP2	68	46.067	Otolemur_garnettii
ENSPMAG00000001570	tdp2b	96	47.529	ENSPPAG00000029023	TDP2	82	47.529	Pan_paniscus
ENSPMAG00000001570	tdp2b	97	48.315	ENSPPRG00000015398	TDP2	69	48.315	Panthera_pardus
ENSPMAG00000001570	tdp2b	97	48.689	ENSPTIG00000018574	TDP2	86	48.689	Panthera_tigris_altaica
ENSPMAG00000001570	tdp2b	96	47.529	ENSPTRG00000017778	TDP2	81	47.148	Pan_troglodytes
ENSPMAG00000001570	tdp2b	98	46.691	ENSPANG00000017590	TDP2	84	46.691	Papio_anubis
ENSPMAG00000001570	tdp2b	97	44.195	ENSPKIG00000006483	tdp2b	68	43.446	Paramormyrops_kingsleyae
ENSPMAG00000001570	tdp2b	97	47.191	ENSPSIG00000004948	TDP2	87	46.816	Pelodiscus_sinensis
ENSPMAG00000001570	tdp2b	97	46.067	ENSPEMG00000001788	Tdp2	67	46.067	Peromyscus_maniculatus_bairdii
ENSPMAG00000001570	tdp2b	97	46.816	ENSPCIG00000007316	TDP2	66	46.067	Phascolarctos_cinereus
ENSPMAG00000001570	tdp2b	97	43.446	ENSPFOG00000017990	-	91	43.071	Poecilia_formosa
ENSPMAG00000001570	tdp2b	97	43.071	ENSPLAG00000019439	-	80	42.697	Poecilia_latipinna
ENSPMAG00000001570	tdp2b	97	43.071	ENSPMEG00000010824	-	85	42.697	Poecilia_mexicana
ENSPMAG00000001570	tdp2b	96	47.529	ENSPPYG00000016282	TDP2	63	47.529	Pongo_abelii
ENSPMAG00000001570	tdp2b	97	45.693	ENSPCOG00000021415	TDP2	88	45.318	Propithecus_coquereli
ENSPMAG00000001570	tdp2b	99	43.542	ENSPNYG00000011532	tdp2b	71	43.273	Pundamilia_nyererei
ENSPMAG00000001570	tdp2b	97	41.197	ENSPNYG00000011504	tdp2b	88	41.197	Pundamilia_nyererei
ENSPMAG00000001570	tdp2b	61	44.048	ENSPNYG00000001944	-	69	44.048	Pundamilia_nyererei
ENSPMAG00000001570	tdp2b	95	45.247	ENSPNAG00000022162	tdp2a	62	45.247	Pygocentrus_nattereri
ENSPMAG00000001570	tdp2b	97	46.816	ENSRNOG00000018246	Tdp2	68	46.816	Rattus_norvegicus
ENSPMAG00000001570	tdp2b	98	46.691	ENSRBIG00000037119	TDP2	84	46.324	Rhinopithecus_bieti
ENSPMAG00000001570	tdp2b	98	46.324	ENSRROG00000005025	TDP2	84	45.956	Rhinopithecus_roxellana
ENSPMAG00000001570	tdp2b	96	48.289	ENSSBOG00000028734	TDP2	81	47.909	Saimiri_boliviensis_boliviensis
ENSPMAG00000001570	tdp2b	97	47.940	ENSSHAG00000002506	TDP2	67	47.191	Sarcophilus_harrisii
ENSPMAG00000001570	tdp2b	96	43.019	ENSSFOG00015011322	-	70	42.642	Scleropages_formosus
ENSPMAG00000001570	tdp2b	97	45.318	ENSSARG00000013547	TDP2	90	44.195	Sorex_araneus
ENSPMAG00000001570	tdp2b	97	49.438	ENSSPUG00000008288	TDP2	68	48.679	Sphenodon_punctatus
ENSPMAG00000001570	tdp2b	97	49.064	ENSSSCG00000001092	TDP2	69	48.315	Sus_scrofa
ENSPMAG00000001570	tdp2b	97	44.944	ENSTGUG00000009035	TDP2	96	44.195	Taeniopygia_guttata
ENSPMAG00000001570	tdp2b	95	41.762	ENSTRUG00000012218	-	86	41.762	Takifugu_rubripes
ENSPMAG00000001570	tdp2b	98	43.704	ENSTRUG00000014347	tdp2b	71	43.066	Takifugu_rubripes
ENSPMAG00000001570	tdp2b	97	43.866	ENSTNIG00000010260	TDP2	97	43.123	Tetraodon_nigroviridis
ENSPMAG00000001570	tdp2b	98	43.333	ENSTNIG00000017792	tdp2b	71	43.333	Tetraodon_nigroviridis
ENSPMAG00000001570	tdp2b	97	48.315	ENSTTRG00000016376	TDP2	69	48.315	Tursiops_truncatus
ENSPMAG00000001570	tdp2b	97	46.816	ENSUAMG00000025939	TDP2	72	46.816	Ursus_americanus
ENSPMAG00000001570	tdp2b	97	47.566	ENSUMAG00000020111	TDP2	84	46.816	Ursus_maritimus
ENSPMAG00000001570	tdp2b	97	48.507	ENSXETG00000014826	tdp2	67	47.761	Xenopus_tropicalis
ENSPMAG00000001570	tdp2b	97	44.776	ENSXCOG00000010778	-	70	44.403	Xiphophorus_couchianus
ENSPMAG00000001570	tdp2b	97	45.149	ENSXMAG00000022252	-	73	44.776	Xiphophorus_maculatus