EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000001636 (Gene tree)
Gene ID: -
Gene Symbol: rad54l2
Alias: -
Full Name: RAD54 like 2
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 19665 bases
Position: chrGL481495:1069-20733
Accession: ZDB-GENE-030131-3097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001801	ResIII	PF04851.15	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001810	-	1917	-	ENSPMAP00000001801	639 (aa)	-	S4R9C0

Gene Model

Click here to download ENSPMAG00000001636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000001636	rad54l2	62	43.860	ENSPMAG00000008026	SMARCA5	56	43.860
ENSPMAG00000001636	rad54l2	90	38.710	ENSPMAG00000002916	rad54b	56	38.710
ENSPMAG00000001636	rad54l2	66	39.884	ENSPMAG00000005064	ercc6l	59	39.884
ENSPMAG00000001636	rad54l2	63	44.643	ENSPMAG00000003871	-	71	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001636	rad54l2	100	55.919	ENSCING00000009208	-	58	55.763	Ciona_intestinalis
ENSPMAG00000001636	rad54l2	100	70.625	ENSLOCG00000014222	rad54l2	59	70.625	Lepisosteus_oculatus
ENSPMAG00000001636	rad54l2	100	68.519	ENSMAUG00000011651	Rad54l2	56	68.519	Mesocricetus_auratus
ENSPMAG00000001636	rad54l2	98	68.720	ENSMALG00000015084	-	53	68.404	Monopterus_albus
ENSPMAG00000001636	rad54l2	93	68.833	ENSOGAG00000012442	RAD54L2	50	68.833	Otolemur_garnettii
ENSPMAG00000001636	rad54l2	100	69.077	ENSPSIG00000014346	RAD54L2	56	69.385	Pelodiscus_sinensis
ENSPMAG00000001636	rad54l2	100	67.547	ENSPMGG00000002208	rad54l2	50	68.111	Periophthalmus_magnuspinnatus
ENSPMAG00000001636	rad54l2	100	69.051	ENSRNOG00000049489	LOC102552166	58	68.971	Rattus_norvegicus
ENSPMAG00000001636	rad54l2	99	68.594	ENSTNIG00000006049	-	56	68.594	Tetraodon_nigroviridis
ENSPMAG00000001636	rad54l2	100	67.812	ENSTNIG00000014694	rad54l2	54	67.812	Tetraodon_nigroviridis
ENSPMAG00000001636	rad54l2	100	69.111	ENSTBEG00000003377	RAD54L2	50	69.111	Tupaia_belangeri
ENSPMAG00000001636	rad54l2	100	69.829	ENSUMAG00000021678	RAD54L2	50	69.829	Ursus_maritimus