EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000001644 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 12578 bases
Position: chrGL484105:1100-13677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001804	KH_1	PF00013.29	1.1e-33	1	2
ENSPMAP00000001804	KH_1	PF00013.29	1.1e-33	2	2
ENSPMAP00000001804	KH_2	PF07650.17	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001813	-	741	-	ENSPMAP00000001804	247 (aa)	-	S4R9C3

Gene Model

Click here to download ENSPMAG00000001644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000001644	-	58	34.921	ENSPMAG00000004551	pcbp3	56	34.375
ENSPMAG00000001644	-	55	31.618	ENSPMAG00000004637	-	68	32.353
ENSPMAG00000001644	-	93	61.017	ENSPMAG00000008286	-	100	61.017
ENSPMAG00000001644	-	60	63.087	ENSPMAG00000006861	fubp1	56	62.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001644	-	90	63.514	ENSG00000162613	FUBP1	94	54.054	Homo_sapiens
ENSPMAG00000001644	-	93	60.262	ENSAPOG00000014845	fubp1	63	60.262	Acanthochromis_polyacanthus
ENSPMAG00000001644	-	90	57.551	ENSAMEG00000007372	FUBP1	59	56.809	Ailuropoda_melanoleuca
ENSPMAG00000001644	-	93	54.585	ENSACIG00000020024	fubp1	62	55.217	Amphilophus_citrinellus
ENSPMAG00000001644	-	93	58.079	ENSAPEG00000012232	fubp1	65	58.952	Amphiprion_percula
ENSPMAG00000001644	-	93	59.825	ENSATEG00000018619	fubp1	64	59.825	Anabas_testudineus
ENSPMAG00000001644	-	85	62.679	ENSAPLG00000005965	FUBP1	57	62.679	Anas_platyrhynchos
ENSPMAG00000001644	-	90	57.787	ENSACAG00000006310	FUBP1	57	54.982	Anolis_carolinensis
ENSPMAG00000001644	-	93	60.699	ENSACLG00000006708	fubp1	64	58.515	Astatotilapia_calliptera
ENSPMAG00000001644	-	57	65.217	ENSAMXG00000005525	fubp1	52	65.217	Astyanax_mexicanus
ENSPMAG00000001644	-	90	63.514	ENSCJAG00000007062	FUBP1	58	61.966	Callithrix_jacchus
ENSPMAG00000001644	-	90	63.514	ENSCAFG00000020361	FUBP1	58	62.393	Canis_familiaris
ENSPMAG00000001644	-	85	63.158	ENSTSYG00000000148	FUBP1	57	63.158	Carlito_syrichta
ENSPMAG00000001644	-	74	66.860	ENSCAPG00000011052	-	66	66.860	Cavia_aperea
ENSPMAG00000001644	-	90	63.514	ENSCPOG00000002757	FUBP1	56	62.393	Cavia_porcellus
ENSPMAG00000001644	-	90	63.514	ENSCCAG00000036537	FUBP1	55	62.393	Cebus_capucinus
ENSPMAG00000001644	-	90	63.514	ENSCATG00000042126	FUBP1	58	62.393	Cercocebus_atys
ENSPMAG00000001644	-	90	63.514	ENSCLAG00000005621	FUBP1	58	62.393	Chinchilla_lanigera
ENSPMAG00000001644	-	90	63.514	ENSCSAG00000001402	FUBP1	58	62.393	Chlorocebus_sabaeus
ENSPMAG00000001644	-	90	63.514	ENSCHOG00000008177	FUBP1	57	62.393	Choloepus_hoffmanni
ENSPMAG00000001644	-	90	64.414	ENSCGRG00001007103	Fubp1	59	60.729	Cricetulus_griseus_chok1gshd
ENSPMAG00000001644	-	85	64.115	ENSCGRG00000003372	Fubp1	57	64.115	Cricetulus_griseus_crigri
ENSPMAG00000001644	-	93	59.825	ENSCSEG00000021412	fubp1	61	59.825	Cynoglossus_semilaevis
ENSPMAG00000001644	-	93	60.262	ENSCVAG00000014487	fubp1	56	60.262	Cyprinodon_variegatus
ENSPMAG00000001644	-	93	59.565	ENSDARG00000029248	fubp1	63	59.565	Danio_rerio
ENSPMAG00000001644	-	88	36.842	ENSDNOG00000034565	-	58	37.121	Dasypus_novemcinctus
ENSPMAG00000001644	-	90	63.063	ENSDORG00000016534	Fubp1	57	61.966	Dipodomys_ordii
ENSPMAG00000001644	-	90	63.964	ENSETEG00000000948	-	52	60.324	Echinops_telfairi
ENSPMAG00000001644	-	65	70.186	ENSEBUG00000016143	fubp1	51	70.186	Eptatretus_burgeri
ENSPMAG00000001644	-	100	56.400	ENSELUG00000007990	fubp1	65	56.000	Esox_lucius
ENSPMAG00000001644	-	90	63.063	ENSFALG00000005768	FUBP1	56	61.803	Ficedula_albicollis
ENSPMAG00000001644	-	90	63.514	ENSFDAG00000014210	FUBP1	57	62.393	Fukomys_damarensis
ENSPMAG00000001644	-	93	59.389	ENSFHEG00000005230	fubp1	59	59.825	Fundulus_heteroclitus
ENSPMAG00000001644	-	90	56.757	ENSGMOG00000003370	fubp1	61	56.757	Gadus_morhua
ENSPMAG00000001644	-	90	63.063	ENSGALG00000008939	FUBP1	70	62.559	Gallus_gallus
ENSPMAG00000001644	-	93	58.515	ENSGAFG00000020972	fubp1	58	58.515	Gambusia_affinis
ENSPMAG00000001644	-	93	57.205	ENSGACG00000016563	fubp1	62	55.274	Gasterosteus_aculeatus
ENSPMAG00000001644	-	93	60.699	ENSHBUG00000009835	fubp1	76	58.515	Haplochromis_burtoni
ENSPMAG00000001644	-	90	58.559	ENSHGLG00000002808	-	64	57.692	Heterocephalus_glaber_female
ENSPMAG00000001644	-	90	63.514	ENSHGLG00000008415	-	57	62.393	Heterocephalus_glaber_female
ENSPMAG00000001644	-	90	63.514	ENSHGLG00100003417	-	57	62.393	Heterocephalus_glaber_male
ENSPMAG00000001644	-	90	58.559	ENSHGLG00100001414	-	64	57.692	Heterocephalus_glaber_male
ENSPMAG00000001644	-	92	57.741	ENSHCOG00000000910	fubp1	63	57.741	Hippocampus_comes
ENSPMAG00000001644	-	93	58.696	ENSIPUG00000009896	fubp1	57	58.696	Ictalurus_punctatus
ENSPMAG00000001644	-	90	63.514	ENSSTOG00000014312	FUBP1	58	62.393	Ictidomys_tridecemlineatus
ENSPMAG00000001644	-	90	63.063	ENSJJAG00000020069	Fubp1	57	61.966	Jaculus_jaculus
ENSPMAG00000001644	-	93	58.952	ENSKMAG00000018897	fubp1	55	58.952	Kryptolebias_marmoratus
ENSPMAG00000001644	-	93	55.833	ENSLBEG00000012700	fubp1	65	54.839	Labrus_bergylta
ENSPMAG00000001644	-	100	51.852	ENSLOCG00000003745	fubp1	65	51.852	Lepisosteus_oculatus
ENSPMAG00000001644	-	90	58.436	ENSLAFG00000003273	FUBP1	52	67.974	Loxodonta_africana
ENSPMAG00000001644	-	90	63.514	ENSMFAG00000031825	FUBP1	58	61.966	Macaca_fascicularis
ENSPMAG00000001644	-	90	63.514	ENSMMUG00000002899	FUBP1	58	62.393	Macaca_mulatta
ENSPMAG00000001644	-	90	63.514	ENSMNEG00000045212	FUBP1	58	62.393	Macaca_nemestrina
ENSPMAG00000001644	-	93	57.500	ENSMAMG00000007489	fubp1	61	57.500	Mastacembelus_armatus
ENSPMAG00000001644	-	93	60.699	ENSMZEG00005024298	fubp1	63	60.699	Maylandia_zebra
ENSPMAG00000001644	-	85	61.722	ENSMGAG00000009424	FUBP1	57	61.722	Meleagris_gallopavo
ENSPMAG00000001644	-	90	63.964	ENSMAUG00000016428	Fubp1	56	62.821	Mesocricetus_auratus
ENSPMAG00000001644	-	90	63.964	ENSMOCG00000014751	Fubp1	58	60.324	Microtus_ochrogaster
ENSPMAG00000001644	-	60	64.865	ENSMMOG00000019463	fubp1	52	65.772	Mola_mola
ENSPMAG00000001644	-	90	63.063	ENSMODG00000020804	FUBP1	64	63.063	Monodelphis_domestica
ENSPMAG00000001644	-	93	58.079	ENSMALG00000015173	fubp1	62	58.079	Monopterus_albus
ENSPMAG00000001644	-	91	62.946	MGP_CAROLIEiJ_G0025740	Fubp1	89	55.224	Mus_caroli
ENSPMAG00000001644	-	91	62.946	ENSMUSG00000028034	Fubp1	89	55.224	Mus_musculus
ENSPMAG00000001644	-	91	62.946	MGP_PahariEiJ_G0027191	Fubp1	85	57.255	Mus_pahari
ENSPMAG00000001644	-	91	62.946	MGP_SPRETEiJ_G0026693	Fubp1	89	55.224	Mus_spretus
ENSPMAG00000001644	-	90	57.551	ENSMLUG00000014802	FUBP1	64	56.809	Myotis_lucifugus
ENSPMAG00000001644	-	90	58.108	ENSNGAG00000014302	Fubp1	58	55.061	Nannospalax_galili
ENSPMAG00000001644	-	93	58.515	ENSNBRG00000015099	fubp1	64	58.515	Neolamprologus_brichardi
ENSPMAG00000001644	-	90	59.193	ENSNLEG00000009772	FUBP1	57	58.298	Nomascus_leucogenys
ENSPMAG00000001644	-	90	63.514	ENSOPRG00000001175	FUBP1	52	59.839	Ochotona_princeps
ENSPMAG00000001644	-	90	63.514	ENSODEG00000002600	-	57	62.393	Octodon_degus
ENSPMAG00000001644	-	93	60.699	ENSONIG00000018381	fubp1	62	60.699	Oreochromis_niloticus
ENSPMAG00000001644	-	72	65.169	ENSOANG00000009777	FUBP1	52	65.169	Ornithorhynchus_anatinus
ENSPMAG00000001644	-	93	58.079	ENSORLG00000003540	fubp1	64	58.952	Oryzias_latipes
ENSPMAG00000001644	-	93	60.262	ENSORLG00020005908	fubp1	63	57.205	Oryzias_latipes_hni
ENSPMAG00000001644	-	93	60.262	ENSORLG00015008779	fubp1	62	60.262	Oryzias_latipes_hsok
ENSPMAG00000001644	-	93	60.262	ENSOMEG00000021943	fubp1	62	57.642	Oryzias_melastigma
ENSPMAG00000001644	-	90	57.085	ENSOGAG00000014233	FUBP1	59	56.371	Otolemur_garnettii
ENSPMAG00000001644	-	90	63.063	ENSOARG00000013259	FUBP1	56	61.966	Ovis_aries
ENSPMAG00000001644	-	90	63.514	ENSPPRG00000000413	FUBP1	58	62.393	Panthera_pardus
ENSPMAG00000001644	-	90	63.514	ENSPTIG00000019450	FUBP1	58	62.393	Panthera_tigris_altaica
ENSPMAG00000001644	-	87	61.111	ENSPSIG00000012965	FUBP1	56	63.590	Pelodiscus_sinensis
ENSPMAG00000001644	-	93	56.332	ENSPMGG00000009060	fubp1	63	56.332	Periophthalmus_magnuspinnatus
ENSPMAG00000001644	-	90	63.964	ENSPEMG00000021802	Fubp1	58	60.729	Peromyscus_maniculatus_bairdii
ENSPMAG00000001644	-	93	59.825	ENSPFOG00000000238	fubp1	55	59.825	Poecilia_formosa
ENSPMAG00000001644	-	93	59.389	ENSPLAG00000021170	fubp1	59	59.825	Poecilia_latipinna
ENSPMAG00000001644	-	93	59.389	ENSPMEG00000004747	fubp1	60	59.389	Poecilia_mexicana
ENSPMAG00000001644	-	93	59.825	ENSPREG00000017911	fubp1	57	59.825	Poecilia_reticulata
ENSPMAG00000001644	-	90	63.063	ENSPPYG00000001219	-	61	61.966	Pongo_abelii
ENSPMAG00000001644	-	90	63.514	ENSPCAG00000012617	FUBP1	57	62.393	Procavia_capensis
ENSPMAG00000001644	-	90	63.514	ENSPCOG00000024974	FUBP1	58	62.393	Propithecus_coquereli
ENSPMAG00000001644	-	90	63.514	ENSPVAG00000014637	FUBP1	58	62.393	Pteropus_vampyrus
ENSPMAG00000001644	-	93	60.699	ENSPNYG00000004552	fubp1	65	60.262	Pundamilia_nyererei
ENSPMAG00000001644	-	100	55.645	ENSPNAG00000016207	fubp1	74	53.725	Pygocentrus_nattereri
ENSPMAG00000001644	-	90	63.063	ENSRNOG00000043370	Fubp1	59	59.514	Rattus_norvegicus
ENSPMAG00000001644	-	90	63.514	ENSRBIG00000042950	FUBP1	58	62.393	Rhinopithecus_bieti
ENSPMAG00000001644	-	90	63.514	ENSRROG00000043534	FUBP1	58	62.393	Rhinopithecus_roxellana
ENSPMAG00000001644	-	90	63.514	ENSSBOG00000027299	FUBP1	58	62.393	Saimiri_boliviensis_boliviensis
ENSPMAG00000001644	-	85	61.792	ENSSHAG00000005367	FUBP1	53	67.949	Sarcophilus_harrisii
ENSPMAG00000001644	-	93	58.009	ENSSFOG00015010213	fubp1	64	58.009	Scleropages_formosus
ENSPMAG00000001644	-	93	59.389	ENSSMAG00000012029	fubp1	58	59.825	Scophthalmus_maximus
ENSPMAG00000001644	-	93	58.696	ENSSDUG00000007383	fubp1	61	57.500	Seriola_dumerili
ENSPMAG00000001644	-	93	58.696	ENSSLDG00000022863	fubp1	65	58.696	Seriola_lalandi_dorsalis
ENSPMAG00000001644	-	90	62.613	ENSSPUG00000008389	FUBP1	53	61.373	Sphenodon_punctatus
ENSPMAG00000001644	-	93	60.699	ENSSPAG00000010161	fubp1	60	60.699	Stegastes_partitus
ENSPMAG00000001644	-	85	62.679	ENSTGUG00000006841	FUBP1	58	62.679	Taeniopygia_guttata
ENSPMAG00000001644	-	91	59.211	ENSTRUG00000004615	fubp1	58	56.485	Takifugu_rubripes
ENSPMAG00000001644	-	60	67.568	ENSTNIG00000019815	-	86	64.103	Tetraodon_nigroviridis
ENSPMAG00000001644	-	90	63.514	ENSTTRG00000000096	FUBP1	57	62.393	Tursiops_truncatus
ENSPMAG00000001644	-	90	63.514	ENSVPAG00000004709	FUBP1	57	62.393	Vicugna_pacos
ENSPMAG00000001644	-	93	56.769	ENSXCOG00000019354	fubp1	65	56.769	Xiphophorus_couchianus
ENSPMAG00000001644	-	93	58.952	ENSXMAG00000007168	fubp1	60	58.952	Xiphophorus_maculatus