EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000001724 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 2405 bases
Position: chrGL488954:4375-6779
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000001888	PARP	PF00644.20	7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000001898	-	648	-	ENSPMAP00000001888	215 (aa)	-	S4R9K7

Gene Model

Click here to download ENSPMAG00000001724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000001724	-	82	41.872	ENSPMAG00000006346	-	99	41.872
ENSPMAG00000001724	-	53	36.207	ENSPMAG00000006865	-	62	36.207
ENSPMAG00000001724	-	97	60.287	ENSPMAG00000002134	-	100	60.287

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001724	-	100	56.279	ENSG00000163659	TIPARP	59	56.279	Homo_sapiens
ENSPMAG00000001724	-	97	41.509	ENSACIG00000003039	-	50	41.509	Amphilophus_citrinellus
ENSPMAG00000001724	-	70	48.366	ENSATEG00000021076	-	58	48.366	Anabas_testudineus
ENSPMAG00000001724	-	94	64.356	ENSGMOG00000009093	TIPARP	54	64.356	Gadus_morhua
ENSPMAG00000001724	-	98	62.559	ENSGACG00000007095	TIPARP	58	62.559	Gasterosteus_aculeatus
ENSPMAG00000001724	-	61	50.000	ENSHCOG00000017982	-	80	50.000	Hippocampus_comes
ENSPMAG00000001724	-	89	41.146	ENSMZEG00005002496	-	74	39.429	Maylandia_zebra
ENSPMAG00000001724	-	85	41.758	ENSNBRG00000010331	-	78	41.758	Neolamprologus_brichardi
ENSPMAG00000001724	-	100	54.884	ENSOANG00000015317	-	84	54.884	Ornithorhynchus_anatinus
ENSPMAG00000001724	-	97	59.809	ENSSPUG00000016837	-	62	59.809	Sphenodon_punctatus
ENSPMAG00000001724	-	73	65.385	ENSTNIG00000001152	-	99	65.385	Tetraodon_nigroviridis
ENSPMAG00000001724	-	95	49.756	ENSXETG00000032370	-	83	49.756	Xenopus_tropicalis