EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000001793 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: -
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 14674 bases
Position: chrGL477038:35795-50468
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002000	CPSF_A	PF03178.15	2.9e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002010	-	3790	-	ENSPMAP00000002000	1217 (aa)	-	S4R9W9

Gene Model

Click here to download ENSPMAG00000001793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001793	sf3b3	100	91.865	ENSG00000189091	SF3B3	100	93.548	Homo_sapiens
ENSPMAG00000001793	sf3b3	96	90.179	ENSAPOG00000006172	sf3b3	98	90.179	Acanthochromis_polyacanthus
ENSPMAG00000001793	sf3b3	100	91.721	ENSAMEG00000002187	SF3B3	100	91.721	Ailuropoda_melanoleuca
ENSPMAG00000001793	sf3b3	92	88.204	ENSACIG00000016487	sf3b3	99	88.204	Amphilophus_citrinellus
ENSPMAG00000001793	sf3b3	100	90.304	ENSAOCG00000007158	sf3b3	100	90.304	Amphiprion_ocellaris
ENSPMAG00000001793	sf3b3	100	90.304	ENSAPEG00000022786	sf3b3	100	90.304	Amphiprion_percula
ENSPMAG00000001793	sf3b3	100	90.715	ENSATEG00000013708	sf3b3	100	90.715	Anabas_testudineus
ENSPMAG00000001793	sf3b3	81	91.895	ENSAPLG00000004996	SF3B3	100	91.895	Anas_platyrhynchos
ENSPMAG00000001793	sf3b3	100	91.701	ENSACAG00000001817	SF3B3	100	91.701	Anolis_carolinensis
ENSPMAG00000001793	sf3b3	100	91.865	ENSANAG00000028001	SF3B3	100	91.865	Aotus_nancymaae
ENSPMAG00000001793	sf3b3	96	90.436	ENSACLG00000022555	sf3b3	98	90.436	Astatotilapia_calliptera
ENSPMAG00000001793	sf3b3	100	91.126	ENSAMXG00000003410	sf3b3	100	91.126	Astyanax_mexicanus
ENSPMAG00000001793	sf3b3	100	91.865	ENSBTAG00000010627	SF3B3	100	91.865	Bos_taurus
ENSPMAG00000001793	sf3b3	100	59.691	WBGene00019323	teg-4	100	59.691	Caenorhabditis_elegans
ENSPMAG00000001793	sf3b3	100	91.865	ENSCJAG00000014773	SF3B3	99	91.865	Callithrix_jacchus
ENSPMAG00000001793	sf3b3	100	91.947	ENSCAFG00000020151	SF3B3	100	91.947	Canis_familiaris
ENSPMAG00000001793	sf3b3	100	91.947	ENSCAFG00020020912	SF3B3	100	91.947	Canis_lupus_dingo
ENSPMAG00000001793	sf3b3	100	91.947	ENSCHIG00000019822	SF3B3	100	91.947	Capra_hircus
ENSPMAG00000001793	sf3b3	100	91.865	ENSTSYG00000007910	SF3B3	100	91.865	Carlito_syrichta
ENSPMAG00000001793	sf3b3	84	78.947	ENSCAPG00000001484	SF3B3	92	78.947	Cavia_aperea
ENSPMAG00000001793	sf3b3	100	90.633	ENSCPOG00000000586	SF3B3	100	90.633	Cavia_porcellus
ENSPMAG00000001793	sf3b3	100	91.865	ENSCCAG00000017736	SF3B3	100	91.865	Cebus_capucinus
ENSPMAG00000001793	sf3b3	100	91.865	ENSCATG00000036562	SF3B3	100	91.865	Cercocebus_atys
ENSPMAG00000001793	sf3b3	100	91.865	ENSCLAG00000003921	SF3B3	100	91.865	Chinchilla_lanigera
ENSPMAG00000001793	sf3b3	100	91.865	ENSCSAG00000004371	SF3B3	100	91.865	Chlorocebus_sabaeus
ENSPMAG00000001793	sf3b3	90	88.162	ENSCHOG00000001878	SF3B3	90	88.162	Choloepus_hoffmanni
ENSPMAG00000001793	sf3b3	100	91.619	ENSCPBG00000015853	SF3B3	100	91.619	Chrysemys_picta_bellii
ENSPMAG00000001793	sf3b3	100	79.475	ENSCING00000001342	-	100	79.475	Ciona_intestinalis
ENSPMAG00000001793	sf3b3	99	79.181	ENSCSAVG00000011454	-	100	78.407	Ciona_savignyi
ENSPMAG00000001793	sf3b3	100	88.661	ENSCANG00000042920	SF3B3	100	89.071	Colobus_angolensis_palliatus
ENSPMAG00000001793	sf3b3	100	91.865	ENSCGRG00001015908	Sf3b3	100	91.865	Cricetulus_griseus_chok1gshd
ENSPMAG00000001793	sf3b3	100	91.865	ENSCGRG00000010180	Sf3b3	100	91.865	Cricetulus_griseus_crigri
ENSPMAG00000001793	sf3b3	82	89.621	ENSCSEG00000014192	sf3b3	99	89.621	Cynoglossus_semilaevis
ENSPMAG00000001793	sf3b3	100	90.222	ENSCVAG00000010459	sf3b3	100	90.222	Cyprinodon_variegatus
ENSPMAG00000001793	sf3b3	100	90.961	ENSDARG00000103553	sf3b3	100	90.961	Danio_rerio
ENSPMAG00000001793	sf3b3	85	91.610	ENSDNOG00000043626	SF3B3	100	91.610	Dasypus_novemcinctus
ENSPMAG00000001793	sf3b3	100	91.865	ENSDORG00000014176	Sf3b3	100	91.865	Dipodomys_ordii
ENSPMAG00000001793	sf3b3	100	74.817	FBgn0035162	Sf3b3	100	74.817	Drosophila_melanogaster
ENSPMAG00000001793	sf3b3	84	95.161	ENSETEG00000002729	SF3B3	84	95.161	Echinops_telfairi
ENSPMAG00000001793	sf3b3	100	89.729	ENSEBUG00000006117	sf3b3	100	89.729	Eptatretus_burgeri
ENSPMAG00000001793	sf3b3	100	91.947	ENSEASG00005013376	SF3B3	100	91.947	Equus_asinus_asinus
ENSPMAG00000001793	sf3b3	100	91.947	ENSECAG00000014053	SF3B3	100	91.947	Equus_caballus
ENSPMAG00000001793	sf3b3	93	91.930	ENSEEUG00000015611	SF3B3	93	91.930	Erinaceus_europaeus
ENSPMAG00000001793	sf3b3	100	89.098	ENSELUG00000015417	sf3b3	100	89.098	Esox_lucius
ENSPMAG00000001793	sf3b3	100	91.947	ENSFCAG00000009487	SF3B3	100	91.947	Felis_catus
ENSPMAG00000001793	sf3b3	100	91.701	ENSFALG00000007372	SF3B3	100	91.701	Ficedula_albicollis
ENSPMAG00000001793	sf3b3	100	91.865	ENSFDAG00000002608	SF3B3	100	91.865	Fukomys_damarensis
ENSPMAG00000001793	sf3b3	100	90.304	ENSFHEG00000017824	sf3b3	100	90.304	Fundulus_heteroclitus
ENSPMAG00000001793	sf3b3	100	86.617	ENSGMOG00000008139	sf3b3	100	86.617	Gadus_morhua
ENSPMAG00000001793	sf3b3	100	91.701	ENSGALG00000002531	SF3B3	100	91.701	Gallus_gallus
ENSPMAG00000001793	sf3b3	100	90.058	ENSGAFG00000015206	sf3b3	100	90.058	Gambusia_affinis
ENSPMAG00000001793	sf3b3	100	90.394	ENSGACG00000002646	sf3b3	100	90.394	Gasterosteus_aculeatus
ENSPMAG00000001793	sf3b3	96	91.887	ENSGAGG00000006746	SF3B3	97	91.887	Gopherus_agassizii
ENSPMAG00000001793	sf3b3	100	91.865	ENSGGOG00000003246	SF3B3	100	91.865	Gorilla_gorilla
ENSPMAG00000001793	sf3b3	92	83.378	ENSHBUG00000005960	sf3b3	99	84.361	Haplochromis_burtoni
ENSPMAG00000001793	sf3b3	100	91.865	ENSHGLG00000010135	SF3B3	100	91.865	Heterocephalus_glaber_female
ENSPMAG00000001793	sf3b3	100	89.781	ENSHGLG00100011148	SF3B3	100	89.781	Heterocephalus_glaber_male
ENSPMAG00000001793	sf3b3	100	90.058	ENSHCOG00000011981	sf3b3	100	90.058	Hippocampus_comes
ENSPMAG00000001793	sf3b3	100	91.208	ENSIPUG00000020435	sf3b3	100	91.208	Ictalurus_punctatus
ENSPMAG00000001793	sf3b3	100	91.865	ENSSTOG00000007065	SF3B3	100	91.865	Ictidomys_tridecemlineatus
ENSPMAG00000001793	sf3b3	100	91.865	ENSJJAG00000003948	Sf3b3	100	91.865	Jaculus_jaculus
ENSPMAG00000001793	sf3b3	100	88.168	ENSKMAG00000004066	sf3b3	99	90.009	Kryptolebias_marmoratus
ENSPMAG00000001793	sf3b3	100	90.304	ENSLBEG00000018302	sf3b3	100	90.304	Labrus_bergylta
ENSPMAG00000001793	sf3b3	98	88.538	ENSLACG00000012501	SF3B3	99	88.538	Latimeria_chalumnae
ENSPMAG00000001793	sf3b3	100	91.461	ENSLOCG00000007566	sf3b3	100	91.461	Lepisosteus_oculatus
ENSPMAG00000001793	sf3b3	100	91.947	ENSLAFG00000012219	SF3B3	100	91.947	Loxodonta_africana
ENSPMAG00000001793	sf3b3	100	91.865	ENSMFAG00000045487	SF3B3	100	91.865	Macaca_fascicularis
ENSPMAG00000001793	sf3b3	100	91.865	ENSMMUG00000017812	SF3B3	100	91.865	Macaca_mulatta
ENSPMAG00000001793	sf3b3	100	91.865	ENSMNEG00000033385	SF3B3	100	91.865	Macaca_nemestrina
ENSPMAG00000001793	sf3b3	100	88.578	ENSMLEG00000043891	SF3B3	100	88.578	Mandrillus_leucophaeus
ENSPMAG00000001793	sf3b3	100	90.633	ENSMAMG00000016837	sf3b3	100	90.633	Mastacembelus_armatus
ENSPMAG00000001793	sf3b3	89	87.974	ENSMZEG00005026015	sf3b3	99	87.974	Maylandia_zebra
ENSPMAG00000001793	sf3b3	100	90.551	ENSMZEG00005010836	sf3b3	100	90.551	Maylandia_zebra
ENSPMAG00000001793	sf3b3	100	91.701	ENSMGAG00000001597	SF3B3	100	91.701	Meleagris_gallopavo
ENSPMAG00000001793	sf3b3	81	75.031	ENSMAUG00000013618	Sf3b3	95	75.406	Mesocricetus_auratus
ENSPMAG00000001793	sf3b3	100	90.894	ENSMICG00000001363	SF3B3	100	90.894	Microcebus_murinus
ENSPMAG00000001793	sf3b3	100	91.865	ENSMOCG00000006108	Sf3b3	100	91.865	Microtus_ochrogaster
ENSPMAG00000001793	sf3b3	89	87.974	ENSMMOG00000002598	sf3b3	97	87.974	Mola_mola
ENSPMAG00000001793	sf3b3	100	88.023	ENSMODG00000014363	SF3B3	100	88.023	Monodelphis_domestica
ENSPMAG00000001793	sf3b3	100	90.551	ENSMALG00000008014	sf3b3	100	90.551	Monopterus_albus
ENSPMAG00000001793	sf3b3	100	91.783	MGP_CAROLIEiJ_G0031563	Sf3b3	100	91.783	Mus_caroli
ENSPMAG00000001793	sf3b3	100	91.865	ENSMUSG00000033732	Sf3b3	100	91.865	Mus_musculus
ENSPMAG00000001793	sf3b3	100	91.783	MGP_SPRETEiJ_G0032681	Sf3b3	100	91.783	Mus_spretus
ENSPMAG00000001793	sf3b3	100	91.947	ENSMPUG00000010277	SF3B3	100	91.947	Mustela_putorius_furo
ENSPMAG00000001793	sf3b3	100	91.701	ENSMLUG00000014607	SF3B3	100	91.701	Myotis_lucifugus
ENSPMAG00000001793	sf3b3	100	91.865	ENSNGAG00000021903	Sf3b3	100	91.865	Nannospalax_galili
ENSPMAG00000001793	sf3b3	83	91.429	ENSNBRG00000007197	sf3b3	99	91.429	Neolamprologus_brichardi
ENSPMAG00000001793	sf3b3	100	90.558	ENSNLEG00000016127	SF3B3	100	90.558	Nomascus_leucogenys
ENSPMAG00000001793	sf3b3	92	87.131	ENSMEUG00000004479	SF3B3	94	87.131	Notamacropus_eugenii
ENSPMAG00000001793	sf3b3	98	88.768	ENSOPRG00000009847	SF3B3	100	88.768	Ochotona_princeps
ENSPMAG00000001793	sf3b3	100	91.865	ENSODEG00000014154	SF3B3	100	91.865	Octodon_degus
ENSPMAG00000001793	sf3b3	100	90.797	ENSONIG00000011198	sf3b3	100	90.797	Oreochromis_niloticus
ENSPMAG00000001793	sf3b3	100	92.112	ENSOANG00000001161	-	100	92.112	Ornithorhynchus_anatinus
ENSPMAG00000001793	sf3b3	100	89.811	ENSOCUG00000004139	SF3B3	100	89.811	Oryctolagus_cuniculus
ENSPMAG00000001793	sf3b3	100	90.058	ENSORLG00000013472	sf3b3	100	90.058	Oryzias_latipes
ENSPMAG00000001793	sf3b3	100	90.058	ENSORLG00020017473	sf3b3	100	90.058	Oryzias_latipes_hni
ENSPMAG00000001793	sf3b3	100	90.058	ENSORLG00015007710	sf3b3	100	90.058	Oryzias_latipes_hsok
ENSPMAG00000001793	sf3b3	100	89.811	ENSOMEG00000014483	sf3b3	100	89.811	Oryzias_melastigma
ENSPMAG00000001793	sf3b3	100	91.639	ENSOGAG00000016051	SF3B3	100	91.639	Otolemur_garnettii
ENSPMAG00000001793	sf3b3	100	91.721	ENSOARG00000004816	SF3B3	100	91.721	Ovis_aries
ENSPMAG00000001793	sf3b3	100	91.865	ENSPPAG00000026807	SF3B3	100	91.865	Pan_paniscus
ENSPMAG00000001793	sf3b3	100	91.947	ENSPPRG00000001686	SF3B3	100	91.947	Panthera_pardus
ENSPMAG00000001793	sf3b3	89	89.236	ENSPTIG00000020382	SF3B3	100	89.236	Panthera_tigris_altaica
ENSPMAG00000001793	sf3b3	100	91.865	ENSPTRG00000008308	SF3B3	100	91.865	Pan_troglodytes
ENSPMAG00000001793	sf3b3	100	91.865	ENSPANG00000024075	SF3B3	100	91.865	Papio_anubis
ENSPMAG00000001793	sf3b3	100	90.715	ENSPKIG00000002712	sf3b3	100	90.715	Paramormyrops_kingsleyae
ENSPMAG00000001793	sf3b3	89	91.996	ENSPSIG00000002232	SF3B3	100	91.996	Pelodiscus_sinensis
ENSPMAG00000001793	sf3b3	100	91.865	ENSPEMG00000008603	Sf3b3	100	91.865	Peromyscus_maniculatus_bairdii
ENSPMAG00000001793	sf3b3	100	92.112	ENSPCIG00000014927	SF3B3	100	92.112	Phascolarctos_cinereus
ENSPMAG00000001793	sf3b3	100	90.140	ENSPFOG00000015516	sf3b3	100	90.140	Poecilia_formosa
ENSPMAG00000001793	sf3b3	100	90.140	ENSPLAG00000014330	sf3b3	100	90.140	Poecilia_latipinna
ENSPMAG00000001793	sf3b3	100	90.222	ENSPMEG00000019856	sf3b3	100	90.222	Poecilia_mexicana
ENSPMAG00000001793	sf3b3	81	90.955	ENSPREG00000019669	sf3b3	97	90.955	Poecilia_reticulata
ENSPMAG00000001793	sf3b3	95	91.626	ENSPPYG00000007539	SF3B3	100	91.626	Pongo_abelii
ENSPMAG00000001793	sf3b3	100	71.487	ENSPCAG00000002623	SF3B3	100	71.487	Procavia_capensis
ENSPMAG00000001793	sf3b3	84	95.327	ENSPCOG00000026582	SF3B3	100	95.327	Propithecus_coquereli
ENSPMAG00000001793	sf3b3	100	91.865	ENSPVAG00000000684	SF3B3	100	91.865	Pteropus_vampyrus
ENSPMAG00000001793	sf3b3	100	90.468	ENSPNYG00000003528	sf3b3	100	90.468	Pundamilia_nyererei
ENSPMAG00000001793	sf3b3	100	91.208	ENSPNAG00000015419	sf3b3	100	91.208	Pygocentrus_nattereri
ENSPMAG00000001793	sf3b3	100	91.865	ENSRNOG00000017724	Sf3b3	100	91.865	Rattus_norvegicus
ENSPMAG00000001793	sf3b3	100	91.865	ENSRBIG00000021904	SF3B3	100	91.865	Rhinopithecus_bieti
ENSPMAG00000001793	sf3b3	100	91.865	ENSRROG00000045703	SF3B3	100	91.865	Rhinopithecus_roxellana
ENSPMAG00000001793	sf3b3	100	91.865	ENSSBOG00000029156	SF3B3	100	91.865	Saimiri_boliviensis_boliviensis
ENSPMAG00000001793	sf3b3	100	92.112	ENSSHAG00000000372	SF3B3	100	92.112	Sarcophilus_harrisii
ENSPMAG00000001793	sf3b3	100	91.208	ENSSFOG00015012877	sf3b3	100	91.208	Scleropages_formosus
ENSPMAG00000001793	sf3b3	100	89.811	ENSSMAG00000014386	sf3b3	100	89.811	Scophthalmus_maximus
ENSPMAG00000001793	sf3b3	100	90.797	ENSSDUG00000021201	sf3b3	100	90.797	Seriola_dumerili
ENSPMAG00000001793	sf3b3	100	90.715	ENSSLDG00000017532	sf3b3	100	90.715	Seriola_lalandi_dorsalis
ENSPMAG00000001793	sf3b3	93	92.096	ENSSARG00000006917	SF3B3	93	92.096	Sorex_araneus
ENSPMAG00000001793	sf3b3	100	91.372	ENSSPUG00000006253	SF3B3	100	91.372	Sphenodon_punctatus
ENSPMAG00000001793	sf3b3	100	83.073	ENSSPAG00000003125	sf3b3	100	83.073	Stegastes_partitus
ENSPMAG00000001793	sf3b3	100	91.947	ENSSSCG00000025323	SF3B3	100	91.947	Sus_scrofa
ENSPMAG00000001793	sf3b3	100	91.708	ENSTGUG00000006082	SF3B3	100	91.708	Taeniopygia_guttata
ENSPMAG00000001793	sf3b3	89	89.982	ENSTNIG00000004857	sf3b3	100	89.982	Tetraodon_nigroviridis
ENSPMAG00000001793	sf3b3	93	78.081	ENSTBEG00000002946	SF3B3	100	78.081	Tupaia_belangeri
ENSPMAG00000001793	sf3b3	100	91.126	ENSTTRG00000005855	SF3B3	100	91.126	Tursiops_truncatus
ENSPMAG00000001793	sf3b3	100	91.947	ENSUAMG00000006780	SF3B3	100	91.947	Ursus_americanus
ENSPMAG00000001793	sf3b3	100	91.947	ENSUMAG00000017757	SF3B3	100	91.947	Ursus_maritimus
ENSPMAG00000001793	sf3b3	100	76.746	ENSVPAG00000003202	SF3B3	100	76.746	Vicugna_pacos
ENSPMAG00000001793	sf3b3	100	92.030	ENSVVUG00000017922	SF3B3	100	92.030	Vulpes_vulpes
ENSPMAG00000001793	sf3b3	100	91.290	ENSXETG00000032869	SF3B3	100	91.290	Xenopus_tropicalis
ENSPMAG00000001793	sf3b3	77	91.295	ENSXCOG00000013628	sf3b3	97	91.295	Xiphophorus_couchianus
ENSPMAG00000001793	sf3b3	100	90.140	ENSXMAG00000006334	sf3b3	99	91.159	Xiphophorus_maculatus