EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000001954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 28220 bases
Position: chrGL477335:26477-54696
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002135	FAM83	PF07894.12	7.8e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002146	-	1178	-	ENSPMAP00000002135	349 (aa)	-	S4RAA4

Gene Model

Click here to download ENSPMAG00000001954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000001954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000001954	-	79	37.681	ENSPMAG00000006570	-	88	39.568
ENSPMAG00000001954	-	58	35.426	ENSPMAG00000008535	-	99	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000001954	-	64	51.786	ENSACIG00000005926	-	54	53.304	Amphilophus_citrinellus
ENSPMAG00000001954	-	100	48.295	ENSAPEG00000014207	-	62	48.997	Amphiprion_percula
ENSPMAG00000001954	-	99	47.262	ENSDARG00000062929	FAM83G	87	48.424	Danio_rerio
ENSPMAG00000001954	-	93	47.531	ENSEBUG00000016357	-	69	47.531	Eptatretus_burgeri
ENSPMAG00000001954	-	99	46.991	ENSFHEG00000000801	FAM83G	63	46.991	Fundulus_heteroclitus
ENSPMAG00000001954	-	99	46.264	ENSGMOG00000006203	si:dkeyp-9d4.4	99	46.264	Gadus_morhua
ENSPMAG00000001954	-	99	45.326	ENSGMOG00000009951	FAM83G	81	45.938	Gadus_morhua
ENSPMAG00000001954	-	99	48.127	ENSGACG00000016760	si:dkeyp-9d4.4	82	48.571	Gasterosteus_aculeatus
ENSPMAG00000001954	-	99	48.588	ENSGAGG00000009036	FAM83G	70	47.922	Gopherus_agassizii
ENSPMAG00000001954	-	99	45.533	ENSLBEG00000002587	FAM83G	56	45.143	Labrus_bergylta
ENSPMAG00000001954	-	99	49.432	ENSLACG00000012035	FAM83G	54	49.719	Latimeria_chalumnae
ENSPMAG00000001954	-	78	47.619	ENSLOCG00000005822	si:dkeyp-9d4.4	98	47.619	Lepisosteus_oculatus
ENSPMAG00000001954	-	99	47.619	ENSMMOG00000003849	si:dkeyp-9d4.4	79	46.742	Mola_mola
ENSPMAG00000001954	-	99	46.779	ENSMEUG00000010323	FAM83G	50	47.645	Notamacropus_eugenii
ENSPMAG00000001954	-	99	48.011	ENSPSIG00000013483	FAM83G	59	48.045	Pelodiscus_sinensis
ENSPMAG00000001954	-	99	48.169	ENSPMGG00000016447	si:dkeyp-9d4.4	72	46.779	Periophthalmus_magnuspinnatus
ENSPMAG00000001954	-	99	47.578	ENSPMGG00000007027	-	69	45.787	Periophthalmus_magnuspinnatus
ENSPMAG00000001954	-	77	48.507	ENSPFOG00000017268	-	92	48.507	Poecilia_formosa
ENSPMAG00000001954	-	51	42.135	ENSPLAG00000023785	-	90	42.135	Poecilia_latipinna
ENSPMAG00000001954	-	99	48.739	ENSPMEG00000001504	FAM83G	69	46.705	Poecilia_mexicana
ENSPMAG00000001954	-	99	42.330	ENSPNYG00000019378	-	68	47.111	Pundamilia_nyererei
ENSPMAG00000001954	-	86	47.667	ENSTRUG00000011906	-	76	45.272	Takifugu_rubripes
ENSPMAG00000001954	-	76	46.970	ENSTNIG00000011604	-	98	46.970	Tetraodon_nigroviridis
ENSPMAG00000001954	-	99	48.857	ENSXETG00000022667	fam83g	56	49.143	Xenopus_tropicalis
ENSPMAG00000001954	-	99	49.143	ENSXMAG00000021557	-	68	45.272	Xiphophorus_maculatus