EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000002022 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 6865 bases
Position: chrGL479632:206105-212969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002211	zf-C2H2	PF00096.26	1.4e-18	1	3
ENSPMAP00000002211	zf-C2H2	PF00096.26	1.4e-18	2	3
ENSPMAP00000002211	zf-C2H2	PF00096.26	1.4e-18	3	3
ENSPMAP00000002211	zf-met	PF12874.7	2.1e-08	1	2
ENSPMAP00000002211	zf-met	PF12874.7	2.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002222	-	540	-	ENSPMAP00000002211	180 (aa)	-	S4RAI0

Gene Model

Click here to download ENSPMAG00000002022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000002022	-	59	44.737	ENSPMAG00000000839	-	94	44.737
ENSPMAG00000002022	-	100	47.727	ENSPMAG00000004710	znf236	53	37.000
ENSPMAG00000002022	-	95	33.918	ENSPMAG00000008691	-	93	33.918
ENSPMAG00000002022	-	100	35.897	ENSPMAG00000007983	-	97	35.897
ENSPMAG00000002022	-	100	40.385	ENSPMAG00000003606	-	67	40.385
ENSPMAG00000002022	-	96	41.270	ENSPMAG00000008196	-	100	41.270
ENSPMAG00000002022	-	100	40.000	ENSPMAG00000000401	-	92	40.000
ENSPMAG00000002022	-	95	40.506	ENSPMAG00000000404	-	92	40.506
ENSPMAG00000002022	-	100	32.743	ENSPMAG00000001294	-	99	32.743
ENSPMAG00000002022	-	100	40.909	ENSPMAG00000007500	ZNF436	99	40.909
ENSPMAG00000002022	-	100	38.462	ENSPMAG00000005248	prdm5	92	38.462
ENSPMAG00000002022	-	100	37.838	ENSPMAG00000008879	-	99	40.909
ENSPMAG00000002022	-	78	36.364	ENSPMAG00000007492	-	78	36.364
ENSPMAG00000002022	-	95	35.185	ENSPMAG00000006708	-	97	35.185
ENSPMAG00000002022	-	100	37.681	ENSPMAG00000000706	-	100	37.681
ENSPMAG00000002022	-	100	34.426	ENSPMAG00000006066	znf366	93	31.875
ENSPMAG00000002022	-	100	32.215	ENSPMAG00000004189	-	98	30.286
ENSPMAG00000002022	-	100	40.404	ENSPMAG00000007084	-	99	40.404
ENSPMAG00000002022	-	100	31.579	ENSPMAG00000005692	-	96	31.579
ENSPMAG00000002022	-	100	42.857	ENSPMAG00000006198	ZBTB47	72	42.857
ENSPMAG00000002022	-	100	32.895	ENSPMAG00000007731	-	85	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002022	-	100	38.835	ENSAPOG00000008319	-	54	38.835	Acanthochromis_polyacanthus
ENSPMAG00000002022	-	100	40.984	ENSAPOG00000019138	-	53	40.984	Acanthochromis_polyacanthus
ENSPMAG00000002022	-	100	40.777	ENSACIG00000004641	-	52	40.777	Amphilophus_citrinellus
ENSPMAG00000002022	-	95	40.164	ENSACIG00000017892	-	59	40.164	Amphilophus_citrinellus
ENSPMAG00000002022	-	100	33.333	ENSACIG00000007464	-	53	33.333	Amphilophus_citrinellus
ENSPMAG00000002022	-	100	38.525	ENSAOCG00000016897	-	64	38.525	Amphiprion_ocellaris
ENSPMAG00000002022	-	68	31.034	ENSAOCG00000006744	-	72	31.034	Amphiprion_ocellaris
ENSPMAG00000002022	-	100	37.864	ENSAOCG00000014769	-	63	37.864	Amphiprion_ocellaris
ENSPMAG00000002022	-	98	38.136	ENSAOCG00000001325	-	75	38.136	Amphiprion_ocellaris
ENSPMAG00000002022	-	100	37.864	ENSAOCG00000015944	-	57	37.864	Amphiprion_ocellaris
ENSPMAG00000002022	-	100	38.525	ENSAPEG00000001556	-	64	38.525	Amphiprion_percula
ENSPMAG00000002022	-	100	36.449	ENSAPEG00000010013	-	57	36.449	Amphiprion_percula
ENSPMAG00000002022	-	100	33.333	ENSATEG00000018931	-	94	32.520	Anabas_testudineus
ENSPMAG00000002022	-	100	39.241	ENSACLG00000011658	-	83	39.241	Astatotilapia_calliptera
ENSPMAG00000002022	-	100	36.478	ENSCING00000002128	zf(c2h2)-35	59	36.478	Ciona_intestinalis
ENSPMAG00000002022	-	100	41.892	ENSCSEG00000010453	-	55	41.892	Cynoglossus_semilaevis
ENSPMAG00000002022	-	98	42.169	ENSCSEG00000015593	-	87	42.169	Cynoglossus_semilaevis
ENSPMAG00000002022	-	97	39.000	ENSCSEG00000010264	-	61	39.000	Cynoglossus_semilaevis
ENSPMAG00000002022	-	95	35.065	ENSCVAG00000015616	-	74	35.065	Cyprinodon_variegatus
ENSPMAG00000002022	-	67	40.625	ENSCVAG00000012682	-	56	40.625	Cyprinodon_variegatus
ENSPMAG00000002022	-	59	36.842	ENSCVAG00000020141	-	75	36.842	Cyprinodon_variegatus
ENSPMAG00000002022	-	100	41.176	ENSCVAG00000003250	-	62	41.176	Cyprinodon_variegatus
ENSPMAG00000002022	-	95	43.443	ENSCVAG00000006653	-	57	43.443	Cyprinodon_variegatus
ENSPMAG00000002022	-	100	39.252	ENSEBUG00000007931	-	59	39.252	Eptatretus_burgeri
ENSPMAG00000002022	-	100	36.496	ENSEBUG00000002290	-	54	36.496	Eptatretus_burgeri
ENSPMAG00000002022	-	100	42.056	ENSELUG00000024007	-	54	39.623	Esox_lucius
ENSPMAG00000002022	-	100	30.994	ENSELUG00000001909	-	71	33.645	Esox_lucius
ENSPMAG00000002022	-	69	36.275	ENSGAFG00000007528	-	50	36.275	Gambusia_affinis
ENSPMAG00000002022	-	100	34.225	ENSGAFG00000008204	-	60	34.225	Gambusia_affinis
ENSPMAG00000002022	-	87	40.789	ENSGAFG00000001879	-	56	40.789	Gambusia_affinis
ENSPMAG00000002022	-	100	38.158	ENSHBUG00000006656	-	54	38.158	Haplochromis_burtoni
ENSPMAG00000002022	-	100	36.517	ENSHCOG00000008550	-	58	36.517	Hippocampus_comes
ENSPMAG00000002022	-	100	37.419	ENSHCOG00000013489	-	91	35.829	Hippocampus_comes
ENSPMAG00000002022	-	95	35.503	ENSHCOG00000015497	-	72	35.503	Hippocampus_comes
ENSPMAG00000002022	-	100	36.517	ENSHCOG00000001873	-	58	36.517	Hippocampus_comes
ENSPMAG00000002022	-	91	41.379	ENSHCOG00000020670	-	73	37.838	Hippocampus_comes
ENSPMAG00000002022	-	100	32.571	ENSKMAG00000007699	-	62	32.571	Kryptolebias_marmoratus
ENSPMAG00000002022	-	100	34.426	ENSLBEG00000007106	-	63	34.426	Labrus_bergylta
ENSPMAG00000002022	-	100	32.039	ENSLBEG00000006161	-	89	31.515	Labrus_bergylta
ENSPMAG00000002022	-	100	35.772	ENSLBEG00000001132	-	55	35.772	Labrus_bergylta
ENSPMAG00000002022	-	95	37.662	ENSLBEG00000017424	-	92	37.662	Labrus_bergylta
ENSPMAG00000002022	-	100	37.158	ENSLOCG00000004208	-	99	37.158	Lepisosteus_oculatus
ENSPMAG00000002022	-	100	34.921	ENSMAMG00000017939	-	58	34.921	Mastacembelus_armatus
ENSPMAG00000002022	-	100	31.325	ENSMZEG00005013907	-	65	31.325	Maylandia_zebra
ENSPMAG00000002022	-	69	43.056	ENSMMOG00000013330	-	50	43.056	Mola_mola
ENSPMAG00000002022	-	100	33.333	ENSMALG00000004279	-	73	33.333	Monopterus_albus
ENSPMAG00000002022	-	100	38.554	ENSONIG00000005050	-	84	38.554	Oreochromis_niloticus
ENSPMAG00000002022	-	100	39.000	ENSONIG00000007967	-	56	38.835	Oreochromis_niloticus
ENSPMAG00000002022	-	100	33.714	ENSORLG00000021885	-	63	36.413	Oryzias_latipes
ENSPMAG00000002022	-	100	34.454	ENSORLG00000002268	-	87	34.454	Oryzias_latipes
ENSPMAG00000002022	-	100	44.262	ENSORLG00000028711	-	90	44.262	Oryzias_latipes
ENSPMAG00000002022	-	100	37.500	ENSORLG00020018921	-	73	37.500	Oryzias_latipes_hni
ENSPMAG00000002022	-	100	44.737	ENSORLG00020019227	-	61	40.000	Oryzias_latipes_hni
ENSPMAG00000002022	-	100	36.905	ENSORLG00015018099	-	62	36.905	Oryzias_latipes_hsok
ENSPMAG00000002022	-	100	32.298	ENSOMEG00000005578	-	66	32.298	Oryzias_melastigma
ENSPMAG00000002022	-	100	35.294	ENSPMGG00000002661	-	64	35.099	Periophthalmus_magnuspinnatus
ENSPMAG00000002022	-	100	37.607	ENSPMGG00000002659	-	62	37.607	Periophthalmus_magnuspinnatus
ENSPMAG00000002022	-	100	40.230	ENSPMGG00000006928	-	51	40.230	Periophthalmus_magnuspinnatus
ENSPMAG00000002022	-	100	41.053	ENSPMGG00000002455	-	88	41.053	Periophthalmus_magnuspinnatus
ENSPMAG00000002022	-	100	43.421	ENSPMGG00000009571	-	74	43.421	Periophthalmus_magnuspinnatus
ENSPMAG00000002022	-	100	40.244	ENSPFOG00000009491	-	51	40.244	Poecilia_formosa
ENSPMAG00000002022	-	100	34.921	ENSPFOG00000018860	-	98	34.921	Poecilia_formosa
ENSPMAG00000002022	-	100	35.455	ENSPLAG00000014832	-	80	35.455	Poecilia_latipinna
ENSPMAG00000002022	-	100	32.934	ENSPLAG00000008941	-	77	35.455	Poecilia_latipinna
ENSPMAG00000002022	-	100	37.302	ENSPLAG00000010067	-	62	37.302	Poecilia_latipinna
ENSPMAG00000002022	-	100	35.455	ENSPMEG00000005210	-	80	35.455	Poecilia_mexicana
ENSPMAG00000002022	-	100	40.244	ENSPMEG00000024117	-	51	40.244	Poecilia_mexicana
ENSPMAG00000002022	-	68	36.842	ENSPREG00000002603	-	52	36.842	Poecilia_reticulata
ENSPMAG00000002022	-	100	35.345	ENSPREG00000009488	-	91	35.345	Poecilia_reticulata
ENSPMAG00000002022	-	100	40.187	ENSPNYG00000017888	-	50	32.258	Pundamilia_nyererei
ENSPMAG00000002022	-	100	31.013	ENSPNAG00000005946	-	88	31.013	Pygocentrus_nattereri
ENSPMAG00000002022	-	72	36.634	ENSSFOG00015011531	-	77	33.766	Scleropages_formosus
ENSPMAG00000002022	-	100	38.272	ENSSMAG00000013291	-	92	33.333	Scophthalmus_maximus
ENSPMAG00000002022	-	100	35.714	ENSSLDG00000014436	-	72	35.714	Seriola_lalandi_dorsalis
ENSPMAG00000002022	-	100	37.719	ENSSPAG00000011533	-	77	37.719	Stegastes_partitus
ENSPMAG00000002022	-	100	38.525	ENSSPAG00000011544	-	52	38.525	Stegastes_partitus
ENSPMAG00000002022	-	100	38.318	ENSXETG00000012506	znf91	99	38.318	Xenopus_tropicalis
ENSPMAG00000002022	-	100	35.088	ENSXCOG00000003441	-	57	35.088	Xiphophorus_couchianus
ENSPMAG00000002022	-	95	40.351	ENSXCOG00000000254	-	61	40.351	Xiphophorus_couchianus
ENSPMAG00000002022	-	100	38.983	ENSXCOG00000020768	-	71	38.983	Xiphophorus_couchianus
ENSPMAG00000002022	-	100	35.455	ENSXMAG00000012936	-	79	35.455	Xiphophorus_maculatus