EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000002131 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: -
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 21878 bases
Position: chrGL478406:25255-47132
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	1	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	2	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	3	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	4	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	5	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	6	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	7	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	8	9
ENSPMAP00000002353	KH_1	PF00013.29	1.8e-138	9	9

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002364	-	2860	-	ENSPMAP00000002353	912 (aa)	-	S4RAX2

Gene Model

Click here to download ENSPMAG00000002131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000002131	hdlbpb	82	33.182	ENSPMAG00000000249	-	85	32.883

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002131	hdlbpb	100	74.671	ENSAPOG00000006904	hdlbpb	96	74.508	Acanthochromis_polyacanthus
ENSPMAG00000002131	hdlbpb	100	73.747	ENSACIG00000016154	hdlbpb	94	73.747	Amphilophus_citrinellus
ENSPMAG00000002131	hdlbpb	100	74.781	ENSAOCG00000004083	hdlbpb	95	74.671	Amphiprion_ocellaris
ENSPMAG00000002131	hdlbpb	100	74.781	ENSAPEG00000012270	hdlbpb	94	74.781	Amphiprion_percula
ENSPMAG00000002131	hdlbpb	100	74.452	ENSATEG00000019877	hdlbpb	95	74.342	Anabas_testudineus
ENSPMAG00000002131	hdlbpb	100	76.206	ENSACAG00000003606	-	95	76.206	Anolis_carolinensis
ENSPMAG00000002131	hdlbpb	100	74.890	ENSACLG00000006618	hdlbpb	94	74.890	Astatotilapia_calliptera
ENSPMAG00000002131	hdlbpb	100	63.825	ENSAMXG00000019946	hdlbpb	94	63.825	Astyanax_mexicanus
ENSPMAG00000002131	hdlbpb	100	74.589	ENSCSEG00000000955	hdlbpb	93	77.307	Cynoglossus_semilaevis
ENSPMAG00000002131	hdlbpb	100	74.561	ENSCVAG00000005345	hdlbpb	97	74.561	Cyprinodon_variegatus
ENSPMAG00000002131	hdlbpb	100	73.494	ENSDARG00000061864	hdlbpb	94	73.494	Danio_rerio
ENSPMAG00000002131	hdlbpb	97	78.774	ENSEBUG00000005304	hdlbpb	95	78.774	Eptatretus_burgeri
ENSPMAG00000002131	hdlbpb	100	66.048	ENSELUG00000019925	hdlbpb	94	66.048	Esox_lucius
ENSPMAG00000002131	hdlbpb	100	69.298	ENSFHEG00000001701	hdlbpb	94	69.298	Fundulus_heteroclitus
ENSPMAG00000002131	hdlbpb	99	79.310	ENSGMOG00000004522	hdlbpb	73	79.310	Gadus_morhua
ENSPMAG00000002131	hdlbpb	100	74.452	ENSGAFG00000005278	hdlbpb	94	74.452	Gambusia_affinis
ENSPMAG00000002131	hdlbpb	100	72.588	ENSGACG00000019361	hdlbpb	94	72.588	Gasterosteus_aculeatus
ENSPMAG00000002131	hdlbpb	100	74.890	ENSHBUG00000018434	hdlbpb	94	74.890	Haplochromis_burtoni
ENSPMAG00000002131	hdlbpb	100	73.326	ENSIPUG00000003291	HDLBP	99	73.326	Ictalurus_punctatus
ENSPMAG00000002131	hdlbpb	100	74.781	ENSKMAG00000016562	hdlbpb	94	74.781	Kryptolebias_marmoratus
ENSPMAG00000002131	hdlbpb	100	74.671	ENSLBEG00000027855	hdlbpb	94	74.671	Labrus_bergylta
ENSPMAG00000002131	hdlbpb	100	75.085	ENSLACG00000007661	hdlbpb	90	75.085	Latimeria_chalumnae
ENSPMAG00000002131	hdlbpb	100	72.667	ENSLOCG00000013909	hdlbpb	94	72.667	Lepisosteus_oculatus
ENSPMAG00000002131	hdlbpb	100	74.671	ENSMAMG00000003035	hdlbpb	96	74.561	Mastacembelus_armatus
ENSPMAG00000002131	hdlbpb	100	74.890	ENSMZEG00005021465	hdlbpb	94	74.890	Maylandia_zebra
ENSPMAG00000002131	hdlbpb	100	74.123	ENSMMOG00000012525	hdlbpb	94	74.123	Mola_mola
ENSPMAG00000002131	hdlbpb	100	72.917	ENSMALG00000008938	hdlbpb	94	72.917	Monopterus_albus
ENSPMAG00000002131	hdlbpb	100	75.000	ENSNBRG00000002236	hdlbpb	94	75.000	Neolamprologus_brichardi
ENSPMAG00000002131	hdlbpb	100	74.808	ENSONIG00000009211	hdlbpb	94	74.808	Oreochromis_niloticus
ENSPMAG00000002131	hdlbpb	100	75.110	ENSORLG00000006581	hdlbpb	96	75.110	Oryzias_latipes
ENSPMAG00000002131	hdlbpb	100	75.000	ENSORLG00020010012	hdlbpb	94	75.000	Oryzias_latipes_hni
ENSPMAG00000002131	hdlbpb	100	75.110	ENSORLG00015006863	hdlbpb	94	75.110	Oryzias_latipes_hsok
ENSPMAG00000002131	hdlbpb	100	74.781	ENSOMEG00000011131	hdlbpb	95	74.781	Oryzias_melastigma
ENSPMAG00000002131	hdlbpb	100	74.753	ENSPKIG00000005966	hdlbpb	94	74.753	Paramormyrops_kingsleyae
ENSPMAG00000002131	hdlbpb	99	71.625	ENSPMGG00000019853	hdlbpb	99	71.625	Periophthalmus_magnuspinnatus
ENSPMAG00000002131	hdlbpb	100	74.345	ENSPFOG00000008755	hdlbpb	94	74.345	Poecilia_formosa
ENSPMAG00000002131	hdlbpb	100	74.452	ENSPLAG00000007055	hdlbpb	94	74.452	Poecilia_latipinna
ENSPMAG00000002131	hdlbpb	100	74.452	ENSPMEG00000001952	hdlbpb	94	74.452	Poecilia_mexicana
ENSPMAG00000002131	hdlbpb	100	74.232	ENSPREG00000012848	hdlbpb	94	74.232	Poecilia_reticulata
ENSPMAG00000002131	hdlbpb	100	74.890	ENSPNYG00000022467	hdlbpb	96	74.890	Pundamilia_nyererei
ENSPMAG00000002131	hdlbpb	100	73.985	ENSPNAG00000011104	hdlbpb	94	73.985	Pygocentrus_nattereri
ENSPMAG00000002131	hdlbpb	100	75.082	ENSSFOG00015023199	hdlbpb	94	75.082	Scleropages_formosus
ENSPMAG00000002131	hdlbpb	100	74.726	ENSSMAG00000008790	hdlbpb	94	74.890	Scophthalmus_maximus
ENSPMAG00000002131	hdlbpb	100	74.671	ENSSDUG00000020694	hdlbpb	94	74.671	Seriola_dumerili
ENSPMAG00000002131	hdlbpb	100	74.671	ENSSLDG00000020807	hdlbpb	94	74.671	Seriola_lalandi_dorsalis
ENSPMAG00000002131	hdlbpb	100	77.303	ENSSPUG00000018688	-	95	77.303	Sphenodon_punctatus
ENSPMAG00000002131	hdlbpb	100	74.781	ENSSPAG00000016969	hdlbpb	94	74.781	Stegastes_partitus
ENSPMAG00000002131	hdlbpb	100	74.918	ENSTRUG00000012888	hdlbpb	95	74.918	Takifugu_rubripes
ENSPMAG00000002131	hdlbpb	100	74.536	ENSTNIG00000002555	hdlbpb	93	74.536	Tetraodon_nigroviridis
ENSPMAG00000002131	hdlbpb	99	65.827	ENSXCOG00000001797	hdlbpb	95	65.827	Xiphophorus_couchianus
ENSPMAG00000002131	hdlbpb	100	74.232	ENSXMAG00000015633	hdlbpb	94	74.232	Xiphophorus_maculatus