EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002147 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: -
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 41591 bases
Position: chrGL480979:15899-57489
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002368	PPR	PF01535.20	2.9e-30	1	4
ENSPMAP00000002368	PPR	PF01535.20	2.9e-30	2	4
ENSPMAP00000002368	PPR	PF01535.20	2.9e-30	3	4
ENSPMAP00000002368	PPR	PF01535.20	2.9e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002379	-	3942	-	ENSPMAP00000002368	1314 (aa)	-	S4RAY7

Gene Model

Click here to download ENSPMAG00000002147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002147	lrpprc	99	46.661	ENSAPOG00000016610	lrpprc	93	46.356	Acanthochromis_polyacanthus
ENSPMAG00000002147	lrpprc	99	45.000	ENSAMEG00000005852	LRPPRC	95	45.000	Ailuropoda_melanoleuca
ENSPMAG00000002147	lrpprc	100	44.251	ENSACIG00000009604	lrpprc	92	44.251	Amphilophus_citrinellus
ENSPMAG00000002147	lrpprc	99	46.887	ENSAOCG00000005886	lrpprc	93	46.887	Amphiprion_ocellaris
ENSPMAG00000002147	lrpprc	99	44.520	ENSAPEG00000002937	lrpprc	94	42.378	Amphiprion_percula
ENSPMAG00000002147	lrpprc	92	58.531	ENSATEG00000010555	lrpprc	93	58.531	Anabas_testudineus
ENSPMAG00000002147	lrpprc	99	48.832	ENSACAG00000029278	LRPPRC	94	48.832	Anolis_carolinensis
ENSPMAG00000002147	lrpprc	99	45.413	ENSANAG00000027440	LRPPRC	84	57.684	Aotus_nancymaae
ENSPMAG00000002147	lrpprc	100	43.839	ENSACLG00000023712	lrpprc	97	43.839	Astatotilapia_calliptera
ENSPMAG00000002147	lrpprc	99	45.193	ENSCJAG00000000794	LRPPRC	85	57.237	Callithrix_jacchus
ENSPMAG00000002147	lrpprc	99	45.890	ENSCHIG00000020173	LRPPRC	96	45.213	Capra_hircus
ENSPMAG00000002147	lrpprc	99	37.029	ENSCAPG00000013631	LRPPRC	96	37.029	Cavia_aperea
ENSPMAG00000002147	lrpprc	92	43.353	ENSCPOG00000000204	LRPPRC	99	43.353	Cavia_porcellus
ENSPMAG00000002147	lrpprc	99	45.524	ENSCCAG00000031900	LRPPRC	85	58.333	Cebus_capucinus
ENSPMAG00000002147	lrpprc	99	45.682	ENSCATG00000014187	LRPPRC	84	57.016	Cercocebus_atys
ENSPMAG00000002147	lrpprc	99	44.597	ENSCLAG00000005203	LRPPRC	93	44.597	Chinchilla_lanigera
ENSPMAG00000002147	lrpprc	99	45.572	ENSCSAG00000013233	LRPPRC	94	45.572	Chlorocebus_sabaeus
ENSPMAG00000002147	lrpprc	83	48.306	ENSCHOG00000003631	LRPPRC	78	48.306	Choloepus_hoffmanni
ENSPMAG00000002147	lrpprc	99	43.788	ENSCANG00000034961	LRPPRC	99	55.556	Colobus_angolensis_palliatus
ENSPMAG00000002147	lrpprc	99	45.061	ENSCGRG00001016261	Lrpprc	94	45.061	Cricetulus_griseus_chok1gshd
ENSPMAG00000002147	lrpprc	99	45.061	ENSCGRG00000004072	Lrpprc	94	45.061	Cricetulus_griseus_crigri
ENSPMAG00000002147	lrpprc	99	38.323	ENSCSEG00000003850	lrpprc	82	50.835	Cynoglossus_semilaevis
ENSPMAG00000002147	lrpprc	99	46.073	ENSCVAG00000012967	lrpprc	93	46.073	Cyprinodon_variegatus
ENSPMAG00000002147	lrpprc	99	44.944	ENSDARG00000043970	lrpprc	91	44.944	Danio_rerio
ENSPMAG00000002147	lrpprc	79	38.063	ENSDNOG00000032336	-	90	38.063	Dasypus_novemcinctus
ENSPMAG00000002147	lrpprc	99	45.358	ENSDNOG00000012594	-	94	45.358	Dasypus_novemcinctus
ENSPMAG00000002147	lrpprc	99	45.468	ENSDORG00000012233	Lrpprc	94	45.468	Dipodomys_ordii
ENSPMAG00000002147	lrpprc	99	44.977	ENSETEG00000006657	LRPPRC	94	44.977	Echinops_telfairi
ENSPMAG00000002147	lrpprc	86	37.823	ENSEEUG00000012340	LRPPRC	88	37.823	Erinaceus_europaeus
ENSPMAG00000002147	lrpprc	99	44.030	ENSELUG00000012803	lrpprc	96	44.030	Esox_lucius
ENSPMAG00000002147	lrpprc	99	45.786	ENSFCAG00000013468	LRPPRC	94	45.786	Felis_catus
ENSPMAG00000002147	lrpprc	99	43.313	ENSFALG00000012738	LRPPRC	97	43.313	Ficedula_albicollis
ENSPMAG00000002147	lrpprc	99	45.061	ENSFDAG00000015328	LRPPRC	94	45.061	Fukomys_damarensis
ENSPMAG00000002147	lrpprc	99	45.652	ENSFHEG00000019604	lrpprc	93	45.652	Fundulus_heteroclitus
ENSPMAG00000002147	lrpprc	99	46.201	ENSGMOG00000008337	lrpprc	94	46.201	Gadus_morhua
ENSPMAG00000002147	lrpprc	99	47.178	ENSGAFG00000001455	lrpprc	93	47.178	Gambusia_affinis
ENSPMAG00000002147	lrpprc	99	46.281	ENSGACG00000010679	lrpprc	98	46.281	Gasterosteus_aculeatus
ENSPMAG00000002147	lrpprc	100	46.852	ENSHBUG00000000393	lrpprc	91	46.852	Haplochromis_burtoni
ENSPMAG00000002147	lrpprc	99	45.137	ENSHGLG00000006123	LRPPRC	94	45.137	Heterocephalus_glaber_female
ENSPMAG00000002147	lrpprc	63	39.568	ENSHGLG00100005960	-	99	39.568	Heterocephalus_glaber_male
ENSPMAG00000002147	lrpprc	99	45.888	ENSHCOG00000002107	lrpprc	93	45.965	Hippocampus_comes
ENSPMAG00000002147	lrpprc	99	45.026	ENSIPUG00000009406	lrpprc	92	45.026	Ictalurus_punctatus
ENSPMAG00000002147	lrpprc	99	45.358	ENSSTOG00000011185	LRPPRC	94	45.358	Ictidomys_tridecemlineatus
ENSPMAG00000002147	lrpprc	99	44.631	ENSJJAG00000020475	Lrpprc	94	44.631	Jaculus_jaculus
ENSPMAG00000002147	lrpprc	99	44.293	ENSKMAG00000003287	lrpprc	80	44.293	Kryptolebias_marmoratus
ENSPMAG00000002147	lrpprc	99	41.456	ENSLBEG00000023225	lrpprc	83	56.840	Labrus_bergylta
ENSPMAG00000002147	lrpprc	99	49.401	ENSLACG00000014030	LRPPRC	93	49.401	Latimeria_chalumnae
ENSPMAG00000002147	lrpprc	99	49.849	ENSLOCG00000016390	lrpprc	90	49.849	Lepisosteus_oculatus
ENSPMAG00000002147	lrpprc	99	43.063	ENSLAFG00000008614	LRPPRC	94	43.063	Loxodonta_africana
ENSPMAG00000002147	lrpprc	99	45.682	ENSMFAG00000041560	LRPPRC	99	54.676	Macaca_fascicularis
ENSPMAG00000002147	lrpprc	99	45.773	ENSMMUG00000019841	LRPPRC	99	54.676	Macaca_mulatta
ENSPMAG00000002147	lrpprc	99	45.682	ENSMNEG00000031613	LRPPRC	84	57.016	Macaca_nemestrina
ENSPMAG00000002147	lrpprc	98	42.182	ENSMAMG00000021835	lrpprc	93	42.555	Mastacembelus_armatus
ENSPMAG00000002147	lrpprc	100	46.777	ENSMZEG00005027379	lrpprc	93	46.777	Maylandia_zebra
ENSPMAG00000002147	lrpprc	99	44.149	ENSMAUG00000012118	Lrpprc	97	43.921	Mesocricetus_auratus
ENSPMAG00000002147	lrpprc	99	46.171	ENSMICG00000010486	LRPPRC	84	57.461	Microcebus_murinus
ENSPMAG00000002147	lrpprc	99	44.757	ENSMOCG00000006048	Lrpprc	94	44.757	Microtus_ochrogaster
ENSPMAG00000002147	lrpprc	99	43.498	ENSMMOG00000007830	lrpprc	93	43.498	Mola_mola
ENSPMAG00000002147	lrpprc	99	44.663	ENSMODG00000000648	LRPPRC	97	44.663	Monodelphis_domestica
ENSPMAG00000002147	lrpprc	99	45.147	ENSMALG00000001271	lrpprc	92	45.147	Monopterus_albus
ENSPMAG00000002147	lrpprc	99	45.283	ENSMPUG00000011800	LRPPRC	93	46.990	Mustela_putorius_furo
ENSPMAG00000002147	lrpprc	99	45.586	ENSMLUG00000010575	LRPPRC	94	45.586	Myotis_lucifugus
ENSPMAG00000002147	lrpprc	99	45.080	ENSNGAG00000013069	Lrpprc	94	45.080	Nannospalax_galili
ENSPMAG00000002147	lrpprc	100	42.976	ENSNBRG00000013202	lrpprc	99	42.976	Neolamprologus_brichardi
ENSPMAG00000002147	lrpprc	99	44.799	ENSNLEG00000016782	LRPPRC	84	57.238	Nomascus_leucogenys
ENSPMAG00000002147	lrpprc	89	38.390	ENSOPRG00000016774	LRPPRC	85	38.390	Ochotona_princeps
ENSPMAG00000002147	lrpprc	99	44.631	ENSODEG00000011211	LRPPRC	94	44.631	Octodon_degus
ENSPMAG00000002147	lrpprc	100	46.777	ENSONIG00000000917	lrpprc	94	46.345	Oreochromis_niloticus
ENSPMAG00000002147	lrpprc	57	41.245	ENSOANG00000014670	-	100	41.245	Ornithorhynchus_anatinus
ENSPMAG00000002147	lrpprc	99	45.655	ENSOCUG00000015046	LRPPRC	90	45.655	Oryctolagus_cuniculus
ENSPMAG00000002147	lrpprc	99	45.324	ENSORLG00000004605	lrpprc	96	43.366	Oryzias_latipes
ENSPMAG00000002147	lrpprc	97	45.869	ENSORLG00020012536	lrpprc	99	45.426	Oryzias_latipes_hni
ENSPMAG00000002147	lrpprc	99	44.663	ENSORLG00015018270	lrpprc	80	58.049	Oryzias_latipes_hsok
ENSPMAG00000002147	lrpprc	99	45.843	ENSOGAG00000012798	LRPPRC	94	45.843	Otolemur_garnettii
ENSPMAG00000002147	lrpprc	99	45.897	ENSOARG00000006522	LRPPRC	94	45.897	Ovis_aries
ENSPMAG00000002147	lrpprc	99	44.360	ENSPPAG00000040876	LRPPRC	84	56.793	Pan_paniscus
ENSPMAG00000002147	lrpprc	99	45.558	ENSPPRG00000006578	LRPPRC	94	45.558	Panthera_pardus
ENSPMAG00000002147	lrpprc	99	45.710	ENSPTIG00000000933	LRPPRC	94	45.710	Panthera_tigris_altaica
ENSPMAG00000002147	lrpprc	99	45.330	ENSPTRG00000011880	LRPPRC	84	56.793	Pan_troglodytes
ENSPMAG00000002147	lrpprc	99	45.758	ENSPANG00000020731	LRPPRC	84	57.461	Papio_anubis
ENSPMAG00000002147	lrpprc	99	40.411	ENSPKIG00000022232	lrpprc	98	42.944	Paramormyrops_kingsleyae
ENSPMAG00000002147	lrpprc	65	43.056	ENSPSIG00000006830	-	99	43.056	Pelodiscus_sinensis
ENSPMAG00000002147	lrpprc	72	35.251	ENSPMGG00000016597	lrpprc	99	35.251	Periophthalmus_magnuspinnatus
ENSPMAG00000002147	lrpprc	99	46.456	ENSPFOG00000011227	lrpprc	95	46.420	Poecilia_formosa
ENSPMAG00000002147	lrpprc	99	46.148	ENSPLAG00000004018	lrpprc	93	46.148	Poecilia_latipinna
ENSPMAG00000002147	lrpprc	99	46.305	ENSPMEG00000016425	lrpprc	93	46.305	Poecilia_mexicana
ENSPMAG00000002147	lrpprc	99	46.388	ENSPREG00000003662	lrpprc	93	46.340	Poecilia_reticulata
ENSPMAG00000002147	lrpprc	61	39.103	ENSPPYG00000029532	-	99	39.103	Pongo_abelii
ENSPMAG00000002147	lrpprc	82	53.550	ENSPCAG00000001430	LRPPRC	78	53.550	Procavia_capensis
ENSPMAG00000002147	lrpprc	99	43.683	ENSPVAG00000002007	LRPPRC	94	43.683	Pteropus_vampyrus
ENSPMAG00000002147	lrpprc	100	43.970	ENSPNYG00000000756	lrpprc	95	43.970	Pundamilia_nyererei
ENSPMAG00000002147	lrpprc	99	45.618	ENSPNAG00000002895	lrpprc	93	45.618	Pygocentrus_nattereri
ENSPMAG00000002147	lrpprc	99	45.786	ENSRNOG00000005877	Lrpprc	94	45.821	Rattus_norvegicus
ENSPMAG00000002147	lrpprc	99	44.921	ENSRBIG00000031552	LRPPRC	94	44.921	Rhinopithecus_bieti
ENSPMAG00000002147	lrpprc	99	45.144	ENSSBOG00000011807	LRPPRC	84	57.238	Saimiri_boliviensis_boliviensis
ENSPMAG00000002147	lrpprc	99	44.478	ENSSHAG00000018725	LRPPRC	97	44.478	Sarcophilus_harrisii
ENSPMAG00000002147	lrpprc	99	46.309	ENSSFOG00015001042	lrpprc	92	46.309	Scleropages_formosus
ENSPMAG00000002147	lrpprc	99	46.606	ENSSDUG00000019062	lrpprc	92	46.606	Seriola_dumerili
ENSPMAG00000002147	lrpprc	99	39.058	ENSSLDG00000023028	lrpprc	94	39.392	Seriola_lalandi_dorsalis
ENSPMAG00000002147	lrpprc	92	43.009	ENSSARG00000000426	LRPPRC	99	43.009	Sorex_araneus
ENSPMAG00000002147	lrpprc	99	42.308	ENSSPAG00000000162	lrpprc	93	42.328	Stegastes_partitus
ENSPMAG00000002147	lrpprc	99	45.482	ENSSSCG00000008452	LRPPRC	94	45.482	Sus_scrofa
ENSPMAG00000002147	lrpprc	99	42.640	ENSTGUG00000003759	LRPPRC	99	42.640	Taeniopygia_guttata
ENSPMAG00000002147	lrpprc	99	46.722	ENSTRUG00000008409	lrpprc	89	46.722	Takifugu_rubripes
ENSPMAG00000002147	lrpprc	99	45.004	ENSTNIG00000007470	lrpprc	98	45.004	Tetraodon_nigroviridis
ENSPMAG00000002147	lrpprc	99	44.875	ENSTTRG00000006403	LRPPRC	94	44.875	Tursiops_truncatus
ENSPMAG00000002147	lrpprc	99	42.662	ENSVPAG00000008993	LRPPRC	98	42.662	Vicugna_pacos
ENSPMAG00000002147	lrpprc	99	48.904	ENSXETG00000009296	lrpprc	95	48.981	Xenopus_tropicalis
ENSPMAG00000002147	lrpprc	99	43.954	ENSXCOG00000013343	lrpprc	84	54.481	Xiphophorus_couchianus
ENSPMAG00000002147	lrpprc	99	46.913	ENSXMAG00000018108	lrpprc	93	46.913	Xiphophorus_maculatus