EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 39310 bases
Position: chrGL478847:204-39513
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002373	ResIII	PF04851.15	8.1e-10	1	1
ENSPMAP00000002378	ResIII	PF04851.15	2.1e-09	1	1
ENSPMAP00000002378	DEAD	PF00270.29	3.4e-25	1	1
ENSPMAP00000002373	DEAD	PF00270.29	4.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002385	-	3417	-	ENSPMAP00000002373	1139 (aa)	-	S4RAZ2
ENSPMAT00000002390	-	3414	-	ENSPMAP00000002378	1138 (aa)	-	S4RAZ7

Gene Model

Click here to download ENSPMAG00000002163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002163	-	100	79.543	ENSG00000112249	ASCC3	69	79.543	Homo_sapiens
ENSPMAG00000002163	-	100	79.368	ENSAMEG00000014749	ASCC3	68	79.368	Ailuropoda_melanoleuca
ENSPMAG00000002163	-	100	76.383	ENSACIG00000004551	ascc3	70	76.383	Amphilophus_citrinellus
ENSPMAG00000002163	-	100	78.578	ENSAOCG00000005106	ascc3	70	78.578	Amphiprion_ocellaris
ENSPMAG00000002163	-	100	78.578	ENSAPEG00000006181	ascc3	73	78.578	Amphiprion_percula
ENSPMAG00000002163	-	100	78.490	ENSATEG00000024950	ascc3	68	78.490	Anabas_testudineus
ENSPMAG00000002163	-	100	79.982	ENSAPLG00000012589	-	76	79.982	Anas_platyrhynchos
ENSPMAG00000002163	-	100	79.368	ENSACAG00000010080	ASCC3	69	79.368	Anolis_carolinensis
ENSPMAG00000002163	-	100	79.631	ENSANAG00000021476	ASCC3	69	79.631	Aotus_nancymaae
ENSPMAG00000002163	-	100	79.280	ENSACLG00000006736	ascc3	78	79.280	Astatotilapia_calliptera
ENSPMAG00000002163	-	100	75.417	ENSAMXG00000001395	ascc3	68	75.417	Astyanax_mexicanus
ENSPMAG00000002163	-	100	79.368	ENSBTAG00000020482	ASCC3	69	79.368	Bos_taurus
ENSPMAG00000002163	-	100	52.069	WBGene00013189	Y54E2A.4	86	50.439	Caenorhabditis_elegans
ENSPMAG00000002163	-	100	79.807	ENSCJAG00000001507	ASCC3	76	79.807	Callithrix_jacchus
ENSPMAG00000002163	-	100	79.456	ENSCAFG00000003554	ASCC3	68	79.456	Canis_familiaris
ENSPMAG00000002163	-	100	79.456	ENSCAFG00020016899	ASCC3	68	79.456	Canis_lupus_dingo
ENSPMAG00000002163	-	100	79.280	ENSCHIG00000023605	ASCC3	68	79.280	Capra_hircus
ENSPMAG00000002163	-	100	78.841	ENSTSYG00000006324	ASCC3	76	78.841	Carlito_syrichta
ENSPMAG00000002163	-	100	76.828	ENSCAPG00000010888	ASCC3	76	76.828	Cavia_aperea
ENSPMAG00000002163	-	100	78.929	ENSCPOG00000013989	ASCC3	69	78.929	Cavia_porcellus
ENSPMAG00000002163	-	100	79.719	ENSCCAG00000024230	ASCC3	69	79.719	Cebus_capucinus
ENSPMAG00000002163	-	100	79.543	ENSCATG00000011281	ASCC3	69	79.543	Cercocebus_atys
ENSPMAG00000002163	-	100	79.017	ENSCLAG00000009794	ASCC3	69	79.017	Chinchilla_lanigera
ENSPMAG00000002163	-	100	79.368	ENSCSAG00000014674	ASCC3	69	79.368	Chlorocebus_sabaeus
ENSPMAG00000002163	-	94	81.818	ENSCHOG00000002063	ASCC3	59	81.818	Choloepus_hoffmanni
ENSPMAG00000002163	-	100	79.631	ENSCPBG00000003881	ASCC3	67	79.631	Chrysemys_picta_bellii
ENSPMAG00000002163	-	100	65.351	ENSCSAVG00000007670	-	100	68.075	Ciona_savignyi
ENSPMAG00000002163	-	100	79.456	ENSCANG00000004215	ASCC3	69	79.456	Colobus_angolensis_palliatus
ENSPMAG00000002163	-	100	79.192	ENSCGRG00001000918	Ascc3	68	79.192	Cricetulus_griseus_chok1gshd
ENSPMAG00000002163	-	100	79.192	ENSCGRG00000012933	Ascc3	68	79.192	Cricetulus_griseus_crigri
ENSPMAG00000002163	-	100	78.139	ENSCSEG00000012811	ascc3	67	78.139	Cynoglossus_semilaevis
ENSPMAG00000002163	-	100	76.903	ENSCVAG00000013014	ascc3	70	76.903	Cyprinodon_variegatus
ENSPMAG00000002163	-	100	79.368	ENSDARG00000086678	ascc3	82	83.721	Danio_rerio
ENSPMAG00000002163	-	100	76.644	ENSDNOG00000010279	ASCC3	89	76.644	Dasypus_novemcinctus
ENSPMAG00000002163	-	100	79.280	ENSDORG00000008572	Ascc3	68	79.280	Dipodomys_ordii
ENSPMAG00000002163	-	100	61.424	FBgn0038344	obe	70	61.424	Drosophila_melanogaster
ENSPMAG00000002163	-	86	76.667	ENSEBUG00000007355	-	99	76.667	Eptatretus_burgeri
ENSPMAG00000002163	-	71	74.656	ENSEBUG00000009772	-	97	74.656	Eptatretus_burgeri
ENSPMAG00000002163	-	100	79.719	ENSEASG00005006324	ASCC3	68	79.719	Equus_asinus_asinus
ENSPMAG00000002163	-	100	79.631	ENSECAG00000012013	ASCC3	73	76.822	Equus_caballus
ENSPMAG00000002163	-	99	78.869	ENSEEUG00000009748	ASCC3	66	78.869	Erinaceus_europaeus
ENSPMAG00000002163	-	100	79.104	ENSELUG00000023441	ascc3	69	79.104	Esox_lucius
ENSPMAG00000002163	-	100	79.456	ENSFCAG00000031266	ASCC3	69	79.456	Felis_catus
ENSPMAG00000002163	-	100	80.334	ENSFALG00000005260	ASCC3	69	79.789	Ficedula_albicollis
ENSPMAG00000002163	-	100	78.753	ENSFDAG00000011358	ASCC3	68	78.753	Fukomys_damarensis
ENSPMAG00000002163	-	100	78.841	ENSFHEG00000019247	ascc3	74	78.841	Fundulus_heteroclitus
ENSPMAG00000002163	-	100	79.192	ENSGMOG00000018158	ascc3	70	79.192	Gadus_morhua
ENSPMAG00000002163	-	100	80.158	ENSGALG00000015465	ASCC3	68	79.613	Gallus_gallus
ENSPMAG00000002163	-	100	78.490	ENSGACG00000014141	ascc3	69	78.490	Gasterosteus_aculeatus
ENSPMAG00000002163	-	100	79.456	ENSGAGG00000020794	ASCC3	81	79.456	Gopherus_agassizii
ENSPMAG00000002163	-	100	79.456	ENSGGOG00000002790	ASCC3	69	79.456	Gorilla_gorilla
ENSPMAG00000002163	-	100	76.957	ENSHBUG00000015110	ascc3	70	76.957	Haplochromis_burtoni
ENSPMAG00000002163	-	100	79.104	ENSHGLG00000002093	ASCC3	67	79.104	Heterocephalus_glaber_female
ENSPMAG00000002163	-	100	78.051	ENSHGLG00100005896	ASCC3	67	78.051	Heterocephalus_glaber_male
ENSPMAG00000002163	-	100	79.456	ENSHCOG00000021142	ascc3	69	79.456	Hippocampus_comes
ENSPMAG00000002163	-	100	80.421	ENSIPUG00000013863	ascc3	69	80.421	Ictalurus_punctatus
ENSPMAG00000002163	-	100	76.032	ENSSTOG00000006645	ASCC3	68	76.032	Ictidomys_tridecemlineatus
ENSPMAG00000002163	-	100	77.173	ENSJJAG00000022570	Ascc3	68	77.349	Jaculus_jaculus
ENSPMAG00000002163	-	100	78.929	ENSKMAG00000003953	ascc3	68	78.929	Kryptolebias_marmoratus
ENSPMAG00000002163	-	100	79.017	ENSLBEG00000009623	ascc3	81	79.017	Labrus_bergylta
ENSPMAG00000002163	-	99	81.054	ENSLACG00000015253	ascc3	86	81.054	Latimeria_chalumnae
ENSPMAG00000002163	-	100	78.265	ENSLOCG00000016550	ascc3	69	78.265	Lepisosteus_oculatus
ENSPMAG00000002163	-	100	78.215	ENSLAFG00000011363	ASCC3	69	78.215	Loxodonta_africana
ENSPMAG00000002163	-	100	79.543	ENSMFAG00000002081	ASCC3	69	79.543	Macaca_fascicularis
ENSPMAG00000002163	-	100	79.543	ENSMMUG00000022287	ASCC3	69	79.543	Macaca_mulatta
ENSPMAG00000002163	-	100	79.543	ENSMNEG00000032760	ASCC3	69	79.543	Macaca_nemestrina
ENSPMAG00000002163	-	100	77.487	ENSMLEG00000035241	ASCC3	69	77.487	Mandrillus_leucophaeus
ENSPMAG00000002163	-	100	78.753	ENSMAMG00000005917	ascc3	69	78.753	Mastacembelus_armatus
ENSPMAG00000002163	-	100	79.280	ENSMZEG00005002710	ascc3	66	79.280	Maylandia_zebra
ENSPMAG00000002163	-	100	78.703	ENSMGAG00000013551	ASCC3	68	78.158	Meleagris_gallopavo
ENSPMAG00000002163	-	100	79.017	ENSMAUG00000018304	Ascc3	68	79.017	Mesocricetus_auratus
ENSPMAG00000002163	-	100	79.280	ENSMICG00000008861	ASCC3	68	79.280	Microcebus_murinus
ENSPMAG00000002163	-	100	78.490	ENSMOCG00000004549	Ascc3	68	78.490	Microtus_ochrogaster
ENSPMAG00000002163	-	100	73.749	ENSMMOG00000003198	ascc3	72	73.795	Mola_mola
ENSPMAG00000002163	-	100	79.895	ENSMODG00000018082	ASCC3	67	79.895	Monodelphis_domestica
ENSPMAG00000002163	-	100	75.154	ENSMALG00000015536	ascc3	70	75.154	Monopterus_albus
ENSPMAG00000002163	-	100	78.753	MGP_CAROLIEiJ_G0015302	Ascc3	68	78.753	Mus_caroli
ENSPMAG00000002163	-	100	78.841	ENSMUSG00000038774	Ascc3	68	78.841	Mus_musculus
ENSPMAG00000002163	-	100	78.753	MGP_SPRETEiJ_G0016111	Ascc3	68	78.753	Mus_spretus
ENSPMAG00000002163	-	100	79.456	ENSMPUG00000001675	ASCC3	68	79.456	Mustela_putorius_furo
ENSPMAG00000002163	-	100	79.807	ENSMLUG00000002886	ASCC3	69	79.807	Myotis_lucifugus
ENSPMAG00000002163	-	100	78.490	ENSNGAG00000000702	Ascc3	68	78.490	Nannospalax_galili
ENSPMAG00000002163	-	99	67.161	ENSNBRG00000022083	ascc3	69	67.161	Neolamprologus_brichardi
ENSPMAG00000002163	-	100	79.280	ENSNLEG00000013890	ASCC3	69	79.280	Nomascus_leucogenys
ENSPMAG00000002163	-	100	88.333	ENSMEUG00000003061	ASCC3	52	88.136	Notamacropus_eugenii
ENSPMAG00000002163	-	100	79.104	ENSODEG00000000069	ASCC3	68	79.104	Octodon_degus
ENSPMAG00000002163	-	100	79.192	ENSONIG00000016540	ascc3	69	79.192	Oreochromis_niloticus
ENSPMAG00000002163	-	100	77.349	ENSOANG00000008944	ASCC3	68	77.349	Ornithorhynchus_anatinus
ENSPMAG00000002163	-	100	79.192	ENSOCUG00000002766	ASCC3	69	79.192	Oryctolagus_cuniculus
ENSPMAG00000002163	-	100	78.929	ENSORLG00000004221	ascc3	73	78.929	Oryzias_latipes
ENSPMAG00000002163	-	100	78.841	ENSORLG00020022595	ascc3	77	78.841	Oryzias_latipes_hni
ENSPMAG00000002163	-	100	78.929	ENSORLG00015009231	ascc3	73	78.929	Oryzias_latipes_hsok
ENSPMAG00000002163	-	100	78.841	ENSOMEG00000019630	ascc3	71	78.841	Oryzias_melastigma
ENSPMAG00000002163	-	100	75.567	ENSOGAG00000009875	ASCC3	72	75.567	Otolemur_garnettii
ENSPMAG00000002163	-	100	79.368	ENSOARG00000011627	ASCC3	68	79.368	Ovis_aries
ENSPMAG00000002163	-	100	79.543	ENSPPAG00000030772	ASCC3	69	79.543	Pan_paniscus
ENSPMAG00000002163	-	100	79.456	ENSPPRG00000011358	ASCC3	68	79.456	Panthera_pardus
ENSPMAG00000002163	-	100	79.368	ENSPTIG00000006331	ASCC3	68	79.368	Panthera_tigris_altaica
ENSPMAG00000002163	-	100	79.543	ENSPTRG00000018448	ASCC3	69	79.543	Pan_troglodytes
ENSPMAG00000002163	-	100	79.456	ENSPANG00000006307	ASCC3	69	79.456	Papio_anubis
ENSPMAG00000002163	-	100	79.456	ENSPKIG00000013639	ascc3	68	79.456	Paramormyrops_kingsleyae
ENSPMAG00000002163	-	99	79.230	ENSPSIG00000002620	-	79	79.230	Pelodiscus_sinensis
ENSPMAG00000002163	-	100	78.753	ENSPEMG00000015319	Ascc3	68	78.753	Peromyscus_maniculatus_bairdii
ENSPMAG00000002163	-	100	80.334	ENSPCIG00000017288	ASCC3	70	80.334	Phascolarctos_cinereus
ENSPMAG00000002163	-	100	78.402	ENSPFOG00000001462	ascc3	75	78.402	Poecilia_formosa
ENSPMAG00000002163	-	100	78.402	ENSPREG00000017616	ascc3	68	78.402	Poecilia_reticulata
ENSPMAG00000002163	-	100	79.543	ENSPPYG00000016869	ASCC3	68	79.543	Pongo_abelii
ENSPMAG00000002163	-	100	74.100	ENSPCAG00000008834	ASCC3	61	74.100	Procavia_capensis
ENSPMAG00000002163	-	100	74.692	ENSPVAG00000012827	ASCC3	65	75.308	Pteropus_vampyrus
ENSPMAG00000002163	-	100	79.368	ENSPNYG00000018913	ascc3	78	79.368	Pundamilia_nyererei
ENSPMAG00000002163	-	100	79.368	ENSPNAG00000016413	ascc3	79	79.368	Pygocentrus_nattereri
ENSPMAG00000002163	-	100	78.929	ENSRNOG00000037604	Ascc3	68	78.929	Rattus_norvegicus
ENSPMAG00000002163	-	100	79.456	ENSRROG00000045402	ASCC3	69	79.456	Rhinopithecus_roxellana
ENSPMAG00000002163	-	100	49.256	YGR271W	-	78	49.256	Saccharomyces_cerevisiae
ENSPMAG00000002163	-	100	79.719	ENSSBOG00000025142	ASCC3	69	79.719	Saimiri_boliviensis_boliviensis
ENSPMAG00000002163	-	100	80.158	ENSSHAG00000016496	ASCC3	69	80.158	Sarcophilus_harrisii
ENSPMAG00000002163	-	100	78.722	ENSSFOG00015010273	ascc3	69	78.722	Scleropages_formosus
ENSPMAG00000002163	-	100	78.929	ENSSMAG00000012927	ascc3	69	78.929	Scophthalmus_maximus
ENSPMAG00000002163	-	100	78.753	ENSSDUG00000010897	ascc3	70	78.753	Seriola_dumerili
ENSPMAG00000002163	-	100	78.841	ENSSLDG00000021782	ascc3	70	78.841	Seriola_lalandi_dorsalis
ENSPMAG00000002163	-	100	89.498	ENSSARG00000001858	ASCC3	60	89.498	Sorex_araneus
ENSPMAG00000002163	-	100	78.929	ENSSPUG00000001842	ASCC3	68	78.929	Sphenodon_punctatus
ENSPMAG00000002163	-	100	79.017	ENSSPAG00000007677	ascc3	69	79.017	Stegastes_partitus
ENSPMAG00000002163	-	100	79.543	ENSSSCG00000004358	ASCC3	75	79.543	Sus_scrofa
ENSPMAG00000002163	-	100	79.790	ENSTGUG00000012262	ASCC3	74	79.790	Taeniopygia_guttata
ENSPMAG00000002163	-	100	78.459	ENSTNIG00000005079	ascc3	66	78.459	Tetraodon_nigroviridis
ENSPMAG00000002163	-	100	74.780	ENSTBEG00000015236	ASCC3	59	75.132	Tupaia_belangeri
ENSPMAG00000002163	-	100	75.309	ENSTTRG00000008255	ASCC3	64	75.309	Tursiops_truncatus
ENSPMAG00000002163	-	99	79.860	ENSUAMG00000023340	-	97	79.860	Ursus_americanus
ENSPMAG00000002163	-	100	79.368	ENSUMAG00000021200	ASCC3	68	79.368	Ursus_maritimus
ENSPMAG00000002163	-	100	76.579	ENSVPAG00000001408	ASCC3	68	76.579	Vicugna_pacos
ENSPMAG00000002163	-	100	79.543	ENSVVUG00000015397	ASCC3	70	79.543	Vulpes_vulpes
ENSPMAG00000002163	-	99	81.624	ENSXETG00000032212	-	78	81.624	Xenopus_tropicalis
ENSPMAG00000002163	-	100	78.402	ENSXMAG00000000071	ascc3	69	78.402	Xiphophorus_maculatus