EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002250 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 14654 bases
Position: chrGL476414:576444-591097
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002468	HAT	PF02184.16	1.2e-30	1	2
ENSPMAP00000002468	HAT	PF02184.16	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002480	-	2198	-	ENSPMAP00000002468	692 (aa)	-	S4RB87

Gene Model

Click here to download ENSPMAG00000002250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002250	crnkl1	99	81.686	ENSG00000101343	CRNKL1	99	81.686	Homo_sapiens
ENSPMAG00000002250	crnkl1	99	81.672	ENSAPOG00000009705	crnkl1	98	81.672	Acanthochromis_polyacanthus
ENSPMAG00000002250	crnkl1	99	82.284	ENSAMEG00000000270	CRNKL1	83	82.413	Ailuropoda_melanoleuca
ENSPMAG00000002250	crnkl1	97	83.234	ENSACIG00000015267	crnkl1	89	83.234	Amphilophus_citrinellus
ENSPMAG00000002250	crnkl1	99	82.055	ENSAOCG00000021964	crnkl1	91	82.055	Amphiprion_ocellaris
ENSPMAG00000002250	crnkl1	99	81.621	ENSAPEG00000015041	crnkl1	90	82.310	Amphiprion_percula
ENSPMAG00000002250	crnkl1	98	81.645	ENSATEG00000001068	crnkl1	89	81.645	Anabas_testudineus
ENSPMAG00000002250	crnkl1	99	80.378	ENSAPLG00000013105	CRNKL1	99	80.378	Anas_platyrhynchos
ENSPMAG00000002250	crnkl1	99	81.977	ENSACAG00000005284	CRNKL1	99	81.977	Anolis_carolinensis
ENSPMAG00000002250	crnkl1	91	82.567	ENSANAG00000024889	CRNKL1	99	82.567	Aotus_nancymaae
ENSPMAG00000002250	crnkl1	99	81.977	ENSACLG00000010813	crnkl1	90	83.136	Astatotilapia_calliptera
ENSPMAG00000002250	crnkl1	96	83.934	ENSAMXG00000018334	crnkl1	90	83.832	Astyanax_mexicanus
ENSPMAG00000002250	crnkl1	99	82.122	ENSBTAG00000008472	CRNKL1	99	82.122	Bos_taurus
ENSPMAG00000002250	crnkl1	93	62.150	WBGene00019762	M03F8.3	91	61.201	Caenorhabditis_elegans
ENSPMAG00000002250	crnkl1	99	81.395	ENSCJAG00000005393	CRNKL1	99	81.395	Callithrix_jacchus
ENSPMAG00000002250	crnkl1	99	82.430	ENSCAFG00000005333	CRNKL1	94	82.438	Canis_familiaris
ENSPMAG00000002250	crnkl1	99	82.558	ENSCAFG00020027488	CRNKL1	99	82.558	Canis_lupus_dingo
ENSPMAG00000002250	crnkl1	99	81.977	ENSCHIG00000013171	CRNKL1	99	81.977	Capra_hircus
ENSPMAG00000002250	crnkl1	99	81.686	ENSTSYG00000004197	CRNKL1	99	81.686	Carlito_syrichta
ENSPMAG00000002250	crnkl1	90	79.968	ENSCAPG00000010501	CRNKL1	99	79.968	Cavia_aperea
ENSPMAG00000002250	crnkl1	99	81.105	ENSCPOG00000004418	CRNKL1	99	81.105	Cavia_porcellus
ENSPMAG00000002250	crnkl1	99	81.395	ENSCCAG00000027037	CRNKL1	99	81.395	Cebus_capucinus
ENSPMAG00000002250	crnkl1	99	81.541	ENSCATG00000034247	CRNKL1	99	81.541	Cercocebus_atys
ENSPMAG00000002250	crnkl1	99	82.122	ENSCLAG00000013859	CRNKL1	99	82.122	Chinchilla_lanigera
ENSPMAG00000002250	crnkl1	99	81.541	ENSCSAG00000011434	CRNKL1	99	81.541	Chlorocebus_sabaeus
ENSPMAG00000002250	crnkl1	99	81.991	ENSCHOG00000006371	CRNKL1	83	82.122	Choloepus_hoffmanni
ENSPMAG00000002250	crnkl1	99	82.003	ENSCPBG00000023501	CRNKL1	99	82.003	Chrysemys_picta_bellii
ENSPMAG00000002250	crnkl1	96	68.619	ENSCING00000002709	-	100	66.909	Ciona_intestinalis
ENSPMAG00000002250	crnkl1	99	81.541	ENSCANG00000038789	CRNKL1	99	81.541	Colobus_angolensis_palliatus
ENSPMAG00000002250	crnkl1	99	82.174	ENSCGRG00001000687	-	99	82.174	Cricetulus_griseus_chok1gshd
ENSPMAG00000002250	crnkl1	99	82.174	ENSCGRG00001001115	-	99	82.174	Cricetulus_griseus_chok1gshd
ENSPMAG00000002250	crnkl1	99	82.174	ENSCGRG00000007854	Crnkl1	99	82.174	Cricetulus_griseus_crigri
ENSPMAG00000002250	crnkl1	97	82.934	ENSCSEG00000005594	crnkl1	85	82.934	Cynoglossus_semilaevis
ENSPMAG00000002250	crnkl1	97	83.982	ENSCVAG00000015172	crnkl1	91	83.407	Cyprinodon_variegatus
ENSPMAG00000002250	crnkl1	96	81.777	ENSDARG00000007901	crnkl1	91	79.710	Danio_rerio
ENSPMAG00000002250	crnkl1	99	82.945	ENSDNOG00000016226	CRNKL1	95	82.945	Dasypus_novemcinctus
ENSPMAG00000002250	crnkl1	97	76.084	ENSDORG00000030174	-	99	76.084	Dipodomys_ordii
ENSPMAG00000002250	crnkl1	99	80.808	ENSDORG00000000394	-	99	80.808	Dipodomys_ordii
ENSPMAG00000002250	crnkl1	96	76.312	ENSDORG00000023724	-	98	76.312	Dipodomys_ordii
ENSPMAG00000002250	crnkl1	97	67.794	FBgn0000377	crn	96	67.794	Drosophila_melanogaster
ENSPMAG00000002250	crnkl1	99	71.780	ENSETEG00000003711	CRNKL1	84	71.780	Echinops_telfairi
ENSPMAG00000002250	crnkl1	99	63.250	ENSEBUG00000013461	crnkl1	97	56.749	Eptatretus_burgeri
ENSPMAG00000002250	crnkl1	99	82.387	ENSEASG00005002072	CRNKL1	99	82.387	Equus_asinus_asinus
ENSPMAG00000002250	crnkl1	99	82.387	ENSECAG00000022215	CRNKL1	99	82.387	Equus_caballus
ENSPMAG00000002250	crnkl1	99	79.532	ENSEEUG00000000413	CRNKL1	92	79.681	Erinaceus_europaeus
ENSPMAG00000002250	crnkl1	97	81.016	ENSELUG00000015424	crnkl1	98	79.595	Esox_lucius
ENSPMAG00000002250	crnkl1	99	82.413	ENSFCAG00000000714	CRNKL1	99	82.413	Felis_catus
ENSPMAG00000002250	crnkl1	97	81.751	ENSFALG00000004611	CRNKL1	99	81.751	Ficedula_albicollis
ENSPMAG00000002250	crnkl1	99	82.070	ENSFDAG00000000604	CRNKL1	99	81.977	Fukomys_damarensis
ENSPMAG00000002250	crnkl1	98	82.840	ENSFHEG00000013163	crnkl1	90	81.621	Fundulus_heteroclitus
ENSPMAG00000002250	crnkl1	97	83.084	ENSGMOG00000007609	crnkl1	95	81.014	Gadus_morhua
ENSPMAG00000002250	crnkl1	99	81.567	ENSGALG00000008429	CRNKL1	99	81.567	Gallus_gallus
ENSPMAG00000002250	crnkl1	97	83.358	ENSGAFG00000014249	crnkl1	91	81.700	Gambusia_affinis
ENSPMAG00000002250	crnkl1	99	79.450	ENSGACG00000011852	crnkl1	90	80.917	Gasterosteus_aculeatus
ENSPMAG00000002250	crnkl1	95	81.487	ENSGAGG00000021233	CRNKL1	99	81.487	Gopherus_agassizii
ENSPMAG00000002250	crnkl1	99	81.686	ENSGGOG00000014176	CRNKL1	99	81.686	Gorilla_gorilla
ENSPMAG00000002250	crnkl1	98	83.284	ENSHBUG00000005246	crnkl1	89	83.284	Haplochromis_burtoni
ENSPMAG00000002250	crnkl1	99	81.686	ENSHGLG00000010856	CRNKL1	99	81.686	Heterocephalus_glaber_female
ENSPMAG00000002250	crnkl1	99	81.686	ENSHGLG00100011521	CRNKL1	99	81.686	Heterocephalus_glaber_male
ENSPMAG00000002250	crnkl1	97	82.186	ENSHCOG00000006420	crnkl1	98	80.435	Hippocampus_comes
ENSPMAG00000002250	crnkl1	96	71.536	ENSIPUG00000006836	-	98	71.088	Ictalurus_punctatus
ENSPMAG00000002250	crnkl1	92	66.195	ENSIPUG00000000315	-	99	66.195	Ictalurus_punctatus
ENSPMAG00000002250	crnkl1	97	81.416	ENSIPUG00000006751	crnkl1	94	81.416	Ictalurus_punctatus
ENSPMAG00000002250	crnkl1	99	82.122	ENSSTOG00000014747	CRNKL1	99	82.122	Ictidomys_tridecemlineatus
ENSPMAG00000002250	crnkl1	99	80.540	ENSJJAG00000016926	Crnkl1	99	80.540	Jaculus_jaculus
ENSPMAG00000002250	crnkl1	99	81.621	ENSKMAG00000003620	crnkl1	88	81.621	Kryptolebias_marmoratus
ENSPMAG00000002250	crnkl1	97	67.704	ENSLBEG00000003543	crnkl1	92	66.667	Labrus_bergylta
ENSPMAG00000002250	crnkl1	99	81.250	ENSLACG00000001129	CRNKL1	100	81.250	Latimeria_chalumnae
ENSPMAG00000002250	crnkl1	96	83.483	ENSLOCG00000016889	crnkl1	99	78.830	Lepisosteus_oculatus
ENSPMAG00000002250	crnkl1	99	81.277	ENSLAFG00000004512	CRNKL1	99	82.003	Loxodonta_africana
ENSPMAG00000002250	crnkl1	99	81.541	ENSMFAG00000039893	CRNKL1	99	81.541	Macaca_fascicularis
ENSPMAG00000002250	crnkl1	99	81.541	ENSMMUG00000007709	CRNKL1	99	81.541	Macaca_mulatta
ENSPMAG00000002250	crnkl1	99	81.541	ENSMNEG00000037490	CRNKL1	99	81.541	Macaca_nemestrina
ENSPMAG00000002250	crnkl1	99	81.541	ENSMLEG00000034885	CRNKL1	99	81.541	Mandrillus_leucophaeus
ENSPMAG00000002250	crnkl1	97	83.084	ENSMAMG00000008757	crnkl1	88	83.084	Mastacembelus_armatus
ENSPMAG00000002250	crnkl1	99	81.977	ENSMZEG00005022345	crnkl1	90	83.136	Maylandia_zebra
ENSPMAG00000002250	crnkl1	99	81.567	ENSMGAG00000003452	CRNKL1	94	81.567	Meleagris_gallopavo
ENSPMAG00000002250	crnkl1	99	82.174	ENSMAUG00000020764	Crnkl1	99	82.174	Mesocricetus_auratus
ENSPMAG00000002250	crnkl1	99	81.541	ENSMICG00000006048	CRNKL1	99	81.541	Microcebus_murinus
ENSPMAG00000002250	crnkl1	99	74.750	ENSMOCG00000000681	-	99	74.750	Microtus_ochrogaster
ENSPMAG00000002250	crnkl1	98	57.826	ENSMOCG00000004179	-	96	58.963	Microtus_ochrogaster
ENSPMAG00000002250	crnkl1	91	81.646	ENSMMOG00000017601	crnkl1	97	81.646	Mola_mola
ENSPMAG00000002250	crnkl1	99	76.087	ENSMODG00000010857	-	99	76.087	Monodelphis_domestica
ENSPMAG00000002250	crnkl1	99	79.685	ENSMODG00000005961	-	99	79.685	Monodelphis_domestica
ENSPMAG00000002250	crnkl1	97	60.266	ENSMALG00000011211	crnkl1	87	61.045	Monopterus_albus
ENSPMAG00000002250	crnkl1	99	81.739	MGP_CAROLIEiJ_G0024394	Crnkl1	99	81.739	Mus_caroli
ENSPMAG00000002250	crnkl1	99	81.884	ENSMUSG00000001767	Crnkl1	99	81.884	Mus_musculus
ENSPMAG00000002250	crnkl1	99	81.304	MGP_PahariEiJ_G0025838	Crnkl1	99	81.304	Mus_pahari
ENSPMAG00000002250	crnkl1	99	81.884	MGP_SPRETEiJ_G0025312	Crnkl1	99	81.884	Mus_spretus
ENSPMAG00000002250	crnkl1	99	82.413	ENSMPUG00000001226	CRNKL1	99	82.413	Mustela_putorius_furo
ENSPMAG00000002250	crnkl1	99	82.018	ENSMLUG00000016513	CRNKL1	89	82.148	Myotis_lucifugus
ENSPMAG00000002250	crnkl1	99	80.171	ENSNGAG00000023097	Crnkl1	99	80.171	Nannospalax_galili
ENSPMAG00000002250	crnkl1	99	82.122	ENSNBRG00000007867	crnkl1	89	83.284	Neolamprologus_brichardi
ENSPMAG00000002250	crnkl1	99	78.924	ENSNLEG00000009862	CRNKL1	99	78.924	Nomascus_leucogenys
ENSPMAG00000002250	crnkl1	99	76.232	ENSMEUG00000002361	-	99	76.232	Notamacropus_eugenii
ENSPMAG00000002250	crnkl1	97	81.575	ENSMEUG00000012167	-	99	81.575	Notamacropus_eugenii
ENSPMAG00000002250	crnkl1	85	55.728	ENSOPRG00000009242	-	61	55.728	Ochotona_princeps
ENSPMAG00000002250	crnkl1	99	81.977	ENSODEG00000012175	CRNKL1	99	81.977	Octodon_degus
ENSPMAG00000002250	crnkl1	99	81.831	ENSONIG00000018728	crnkl1	91	81.831	Oreochromis_niloticus
ENSPMAG00000002250	crnkl1	98	80.966	ENSOCUG00000015484	CRNKL1	82	81.686	Oryctolagus_cuniculus
ENSPMAG00000002250	crnkl1	98	81.738	ENSORLG00000017240	crnkl1	96	78.894	Oryzias_latipes
ENSPMAG00000002250	crnkl1	97	82.318	ENSORLG00020001742	crnkl1	90	82.318	Oryzias_latipes_hni
ENSPMAG00000002250	crnkl1	98	81.885	ENSORLG00015019564	crnkl1	91	81.885	Oryzias_latipes_hsok
ENSPMAG00000002250	crnkl1	97	82.493	ENSOMEG00000019895	crnkl1	90	82.493	Oryzias_melastigma
ENSPMAG00000002250	crnkl1	99	81.831	ENSOGAG00000011544	CRNKL1	99	81.831	Otolemur_garnettii
ENSPMAG00000002250	crnkl1	99	82.138	ENSOARG00000002150	CRNKL1	89	82.267	Ovis_aries
ENSPMAG00000002250	crnkl1	99	81.140	ENSPPAG00000027847	CRNKL1	83	81.277	Pan_paniscus
ENSPMAG00000002250	crnkl1	99	82.413	ENSPPRG00000001955	CRNKL1	99	82.413	Panthera_pardus
ENSPMAG00000002250	crnkl1	99	82.413	ENSPTIG00000007393	CRNKL1	99	82.413	Panthera_tigris_altaica
ENSPMAG00000002250	crnkl1	99	81.686	ENSPTRG00000030609	CRNKL1	99	81.686	Pan_troglodytes
ENSPMAG00000002250	crnkl1	99	81.541	ENSPANG00000017420	CRNKL1	99	81.541	Papio_anubis
ENSPMAG00000002250	crnkl1	96	78.529	ENSPKIG00000017093	crnkl1	89	76.734	Paramormyrops_kingsleyae
ENSPMAG00000002250	crnkl1	99	80.904	ENSPSIG00000012705	CRNKL1	99	80.904	Pelodiscus_sinensis
ENSPMAG00000002250	crnkl1	99	77.193	ENSPMGG00000006263	crnkl1	98	76.411	Periophthalmus_magnuspinnatus
ENSPMAG00000002250	crnkl1	99	81.884	ENSPEMG00000000073	-	99	81.884	Peromyscus_maniculatus_bairdii
ENSPMAG00000002250	crnkl1	99	81.503	ENSPCIG00000025825	CRNKL1	96	81.503	Phascolarctos_cinereus
ENSPMAG00000002250	crnkl1	97	83.036	ENSPFOG00000005102	crnkl1	91	82.963	Poecilia_formosa
ENSPMAG00000002250	crnkl1	97	83.061	ENSPLAG00000007288	crnkl1	88	82.988	Poecilia_latipinna
ENSPMAG00000002250	crnkl1	97	83.185	ENSPMEG00000008865	crnkl1	92	83.111	Poecilia_mexicana
ENSPMAG00000002250	crnkl1	97	83.533	ENSPREG00000012615	crnkl1	90	82.963	Poecilia_reticulata
ENSPMAG00000002250	crnkl1	99	81.287	ENSPPYG00000010747	CRNKL1	81	81.422	Pongo_abelii
ENSPMAG00000002250	crnkl1	99	77.339	ENSPCAG00000003296	CRNKL1	85	77.504	Procavia_capensis
ENSPMAG00000002250	crnkl1	99	80.848	ENSPCOG00000017608	CRNKL1	83	80.987	Propithecus_coquereli
ENSPMAG00000002250	crnkl1	99	82.430	ENSPVAG00000006207	CRNKL1	83	82.558	Pteropus_vampyrus
ENSPMAG00000002250	crnkl1	99	81.831	ENSPNYG00000001977	crnkl1	89	82.988	Pundamilia_nyererei
ENSPMAG00000002250	crnkl1	97	83.683	ENSPNAG00000001507	crnkl1	98	79.275	Pygocentrus_nattereri
ENSPMAG00000002250	crnkl1	99	81.739	ENSRNOG00000040045	Crnkl1	99	81.739	Rattus_norvegicus
ENSPMAG00000002250	crnkl1	99	81.884	ENSRNOG00000010587	Crnkl1	99	81.884	Rattus_norvegicus
ENSPMAG00000002250	crnkl1	99	81.395	ENSRBIG00000031770	CRNKL1	99	81.395	Rhinopithecus_bieti
ENSPMAG00000002250	crnkl1	99	81.395	ENSRROG00000040450	CRNKL1	99	81.395	Rhinopithecus_roxellana
ENSPMAG00000002250	crnkl1	94	36.994	YLR117C	CLF1	99	37.085	Saccharomyces_cerevisiae
ENSPMAG00000002250	crnkl1	99	81.686	ENSSBOG00000029672	CRNKL1	99	81.686	Saimiri_boliviensis_boliviensis
ENSPMAG00000002250	crnkl1	95	68.085	ENSSHAG00000011199	CRNKL1	99	68.085	Sarcophilus_harrisii
ENSPMAG00000002250	crnkl1	96	82.831	ENSSFOG00015000946	crnkl1	89	80.786	Scleropages_formosus
ENSPMAG00000002250	crnkl1	98	81.287	ENSSMAG00000007933	crnkl1	88	81.287	Scophthalmus_maximus
ENSPMAG00000002250	crnkl1	97	76.497	ENSSDUG00000012625	crnkl1	85	76.497	Seriola_dumerili
ENSPMAG00000002250	crnkl1	97	82.934	ENSSLDG00000021413	crnkl1	87	82.934	Seriola_lalandi_dorsalis
ENSPMAG00000002250	crnkl1	99	81.858	ENSSARG00000006443	CRNKL1	82	81.858	Sorex_araneus
ENSPMAG00000002250	crnkl1	99	81.541	ENSSPUG00000005254	CRNKL1	99	81.541	Sphenodon_punctatus
ENSPMAG00000002250	crnkl1	97	83.084	ENSSPAG00000016150	crnkl1	86	83.084	Stegastes_partitus
ENSPMAG00000002250	crnkl1	99	81.884	ENSSSCG00000038587	CRNKL1	99	81.884	Sus_scrofa
ENSPMAG00000002250	crnkl1	99	81.858	ENSTGUG00000007645	CRNKL1	98	81.858	Taeniopygia_guttata
ENSPMAG00000002250	crnkl1	97	77.976	ENSTRUG00000015417	crnkl1	90	77.696	Takifugu_rubripes
ENSPMAG00000002250	crnkl1	97	82.335	ENSTNIG00000010710	crnkl1	98	81.630	Tetraodon_nigroviridis
ENSPMAG00000002250	crnkl1	90	81.150	ENSTBEG00000001304	CRNKL1	82	81.300	Tupaia_belangeri
ENSPMAG00000002250	crnkl1	90	79.393	ENSTTRG00000000484	CRNKL1	81	79.556	Tursiops_truncatus
ENSPMAG00000002250	crnkl1	99	82.413	ENSUAMG00000018586	CRNKL1	99	82.413	Ursus_americanus
ENSPMAG00000002250	crnkl1	99	82.413	ENSUMAG00000024957	CRNKL1	99	82.413	Ursus_maritimus
ENSPMAG00000002250	crnkl1	99	82.310	ENSVVUG00000012559	CRNKL1	82	82.438	Vulpes_vulpes
ENSPMAG00000002250	crnkl1	99	81.567	ENSXETG00000009698	crnkl1	99	81.567	Xenopus_tropicalis
ENSPMAG00000002250	crnkl1	97	82.887	ENSXCOG00000000824	crnkl1	92	81.752	Xiphophorus_couchianus
ENSPMAG00000002250	crnkl1	97	83.185	ENSXMAG00000006896	crnkl1	92	82.044	Xiphophorus_maculatus