EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 34753 bases
Position: chrGL477141:142198-176950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002728	zf-RanBP	PF00641.18	5.4e-26	1	3
ENSPMAP00000002728	zf-RanBP	PF00641.18	5.4e-26	2	3
ENSPMAP00000002728	zf-RanBP	PF00641.18	5.4e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002741	-	2448	-	ENSPMAP00000002728	816 (aa)	-	S4RBZ6

Gene Model

Click here to download ENSPMAG00000002487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002487	-	100	36.550	ENSG00000124789	NUP153	57	41.584	Homo_sapiens
ENSPMAG00000002487	-	100	43.396	ENSAPOG00000019495	nup153	58	47.170	Acanthochromis_polyacanthus
ENSPMAG00000002487	-	99	54.054	ENSAMEG00000000721	NUP153	58	54.054	Ailuropoda_melanoleuca
ENSPMAG00000002487	-	100	62.162	ENSACIG00000010784	nup153	57	34.594	Amphilophus_citrinellus
ENSPMAG00000002487	-	100	45.283	ENSAOCG00000007098	nup153	56	45.283	Amphiprion_ocellaris
ENSPMAG00000002487	-	100	45.283	ENSAPEG00000012075	nup153	57	45.283	Amphiprion_percula
ENSPMAG00000002487	-	100	45.133	ENSATEG00000014134	nup153	57	45.133	Anabas_testudineus
ENSPMAG00000002487	-	99	34.896	ENSACAG00000004118	NUP153	58	36.702	Anolis_carolinensis
ENSPMAG00000002487	-	100	37.594	ENSANAG00000001808	NUP153	58	39.259	Aotus_nancymaae
ENSPMAG00000002487	-	100	44.340	ENSACLG00000016592	nup153	57	48.529	Astatotilapia_calliptera
ENSPMAG00000002487	-	99	49.495	ENSAMXG00000021025	nup153	56	51.515	Astyanax_mexicanus
ENSPMAG00000002487	-	100	36.298	ENSBTAG00000017128	NUP153	59	36.943	Bos_taurus
ENSPMAG00000002487	-	100	54.054	ENSCJAG00000006685	NUP153	57	54.054	Callithrix_jacchus
ENSPMAG00000002487	-	100	54.054	ENSCAFG00000010146	NUP153	58	54.054	Canis_familiaris
ENSPMAG00000002487	-	100	54.054	ENSCAFG00020010901	NUP153	58	54.054	Canis_lupus_dingo
ENSPMAG00000002487	-	100	40.594	ENSCHIG00000023764	NUP153	58	40.594	Capra_hircus
ENSPMAG00000002487	-	99	56.757	ENSTSYG00000001251	NUP153	58	56.757	Carlito_syrichta
ENSPMAG00000002487	-	100	56.757	ENSCPOG00000004007	NUP153	57	56.757	Cavia_porcellus
ENSPMAG00000002487	-	100	37.594	ENSCCAG00000024038	NUP153	56	39.259	Cebus_capucinus
ENSPMAG00000002487	-	100	36.594	ENSCATG00000041429	NUP153	57	36.975	Cercocebus_atys
ENSPMAG00000002487	-	100	51.111	ENSCLAG00000001915	NUP153	58	51.111	Chinchilla_lanigera
ENSPMAG00000002487	-	100	38.806	ENSCSAG00000007624	NUP153	57	39.259	Chlorocebus_sabaeus
ENSPMAG00000002487	-	84	31.736	ENSCHOG00000008316	-	59	31.736	Choloepus_hoffmanni
ENSPMAG00000002487	-	84	32.850	ENSCHOG00000003510	-	59	32.850	Choloepus_hoffmanni
ENSPMAG00000002487	-	77	31.020	ENSCHOG00000007137	-	59	30.737	Choloepus_hoffmanni
ENSPMAG00000002487	-	78	36.893	ENSCHOG00000013388	-	82	38.095	Choloepus_hoffmanni
ENSPMAG00000002487	-	100	37.500	ENSCPBG00000008333	NUP153	58	37.383	Chrysemys_picta_bellii
ENSPMAG00000002487	-	85	41.509	ENSCANG00000033390	NUP153	51	41.509	Colobus_angolensis_palliatus
ENSPMAG00000002487	-	100	48.649	ENSCGRG00001021016	Nup153	57	48.649	Cricetulus_griseus_chok1gshd
ENSPMAG00000002487	-	99	48.649	ENSCGRG00000009244	Nup153	59	48.649	Cricetulus_griseus_crigri
ENSPMAG00000002487	-	100	41.905	ENSCSEG00000017912	nup153	58	41.905	Cynoglossus_semilaevis
ENSPMAG00000002487	-	100	62.500	ENSDARG00000099972	nup153	58	62.500	Danio_rerio
ENSPMAG00000002487	-	99	35.986	ENSDNOG00000001153	NUP153	57	35.697	Dasypus_novemcinctus
ENSPMAG00000002487	-	100	35.545	ENSDORG00000001736	Nup153	58	54.054	Dipodomys_ordii
ENSPMAG00000002487	-	100	54.054	ENSEASG00005009945	NUP153	59	54.054	Equus_asinus_asinus
ENSPMAG00000002487	-	100	54.054	ENSECAG00000016010	NUP153	58	54.054	Equus_caballus
ENSPMAG00000002487	-	99	41.111	ENSELUG00000019108	nup153	57	39.850	Esox_lucius
ENSPMAG00000002487	-	100	51.351	ENSFCAG00000011583	NUP153	58	51.351	Felis_catus
ENSPMAG00000002487	-	84	34.979	ENSFALG00000013388	NUP153	52	35.393	Ficedula_albicollis
ENSPMAG00000002487	-	83	42.857	ENSFHEG00000013401	nup153	52	42.857	Fundulus_heteroclitus
ENSPMAG00000002487	-	100	43.750	ENSGMOG00000010422	nup153	61	44.340	Gadus_morhua
ENSPMAG00000002487	-	100	36.413	ENSGALG00000012720	NUP153	58	36.066	Gallus_gallus
ENSPMAG00000002487	-	100	49.541	ENSGAFG00000010927	nup153	58	51.887	Gambusia_affinis
ENSPMAG00000002487	-	99	40.367	ENSGACG00000005389	nup153	60	43.810	Gasterosteus_aculeatus
ENSPMAG00000002487	-	100	36.957	ENSGAGG00000022386	NUP153	58	36.757	Gopherus_agassizii
ENSPMAG00000002487	-	100	36.567	ENSGGOG00000014261	NUP153	57	40.777	Gorilla_gorilla
ENSPMAG00000002487	-	100	44.340	ENSHBUG00000002944	nup153	56	48.529	Haplochromis_burtoni
ENSPMAG00000002487	-	100	56.757	ENSHGLG00000007924	NUP153	57	56.757	Heterocephalus_glaber_female
ENSPMAG00000002487	-	100	56.757	ENSHGLG00100001529	NUP153	57	56.757	Heterocephalus_glaber_male
ENSPMAG00000002487	-	99	34.572	ENSHCOG00000019361	nup153	58	58.333	Hippocampus_comes
ENSPMAG00000002487	-	100	60.465	ENSIPUG00000014605	nup153	58	60.465	Ictalurus_punctatus
ENSPMAG00000002487	-	99	54.054	ENSSTOG00000005807	NUP153	58	54.054	Ictidomys_tridecemlineatus
ENSPMAG00000002487	-	100	51.351	ENSJJAG00000016760	Nup153	58	51.351	Jaculus_jaculus
ENSPMAG00000002487	-	100	46.226	ENSKMAG00000006344	nup153	58	48.113	Kryptolebias_marmoratus
ENSPMAG00000002487	-	100	42.857	ENSLBEG00000002982	nup153	57	50.000	Labrus_bergylta
ENSPMAG00000002487	-	99	56.098	ENSLACG00000006480	NUP153	58	56.098	Latimeria_chalumnae
ENSPMAG00000002487	-	100	36.385	ENSLOCG00000008267	nup153	59	37.662	Lepisosteus_oculatus
ENSPMAG00000002487	-	100	51.351	ENSLAFG00000015905	NUP153	58	40.385	Loxodonta_africana
ENSPMAG00000002487	-	100	36.567	ENSMFAG00000045732	NUP153	57	36.735	Macaca_fascicularis
ENSPMAG00000002487	-	100	36.594	ENSMMUG00000001993	NUP153	58	35.840	Macaca_mulatta
ENSPMAG00000002487	-	100	36.615	ENSMNEG00000038011	NUP153	58	36.071	Macaca_nemestrina
ENSPMAG00000002487	-	100	36.473	ENSMLEG00000030776	NUP153	59	36.516	Mandrillus_leucophaeus
ENSPMAG00000002487	-	100	57.500	ENSMAMG00000013184	nup153	57	45.588	Mastacembelus_armatus
ENSPMAG00000002487	-	99	44.340	ENSMZEG00005004371	nup153	56	48.529	Maylandia_zebra
ENSPMAG00000002487	-	99	35.326	ENSMGAG00000003139	NUP153	59	39.604	Meleagris_gallopavo
ENSPMAG00000002487	-	100	48.649	ENSMAUG00000007737	Nup153	59	48.649	Mesocricetus_auratus
ENSPMAG00000002487	-	100	51.351	ENSMICG00000006089	NUP153	57	51.351	Microcebus_murinus
ENSPMAG00000002487	-	100	48.649	ENSMOCG00000007623	Nup153	57	48.649	Microtus_ochrogaster
ENSPMAG00000002487	-	100	57.500	ENSMMOG00000019049	nup153	57	57.500	Mola_mola
ENSPMAG00000002487	-	99	54.054	ENSMODG00000010951	NUP153	58	54.054	Monodelphis_domestica
ENSPMAG00000002487	-	100	52.500	ENSMALG00000013995	nup153	58	52.500	Monopterus_albus
ENSPMAG00000002487	-	100	35.457	MGP_CAROLIEiJ_G0018483	Nup153	57	35.878	Mus_caroli
ENSPMAG00000002487	-	100	36.691	ENSMUSG00000021374	Nup153	63	34.928	Mus_musculus
ENSPMAG00000002487	-	100	35.442	MGP_PahariEiJ_G0019551	Nup153	57	35.878	Mus_pahari
ENSPMAG00000002487	-	100	35.399	MGP_SPRETEiJ_G0019363	Nup153	57	35.878	Mus_spretus
ENSPMAG00000002487	-	100	34.325	ENSMLUG00000004775	NUP153	59	54.054	Myotis_lucifugus
ENSPMAG00000002487	-	99	54.054	ENSNGAG00000013817	Nup153	56	54.054	Nannospalax_galili
ENSPMAG00000002487	-	99	44.340	ENSNBRG00000012456	nup153	55	48.529	Neolamprologus_brichardi
ENSPMAG00000002487	-	100	37.313	ENSNLEG00000001141	NUP153	57	38.519	Nomascus_leucogenys
ENSPMAG00000002487	-	100	33.960	ENSOPRG00000006221	NUP153	60	35.000	Ochotona_princeps
ENSPMAG00000002487	-	100	54.054	ENSODEG00000005620	NUP153	62	37.805	Octodon_degus
ENSPMAG00000002487	-	100	45.283	ENSONIG00000002524	nup153	58	47.059	Oreochromis_niloticus
ENSPMAG00000002487	-	99	42.056	ENSOANG00000011858	NUP153	58	42.056	Ornithorhynchus_anatinus
ENSPMAG00000002487	-	100	38.931	ENSOCUG00000003064	NUP153	57	39.098	Oryctolagus_cuniculus
ENSPMAG00000002487	-	100	64.865	ENSORLG00000012674	nup153	57	64.865	Oryzias_latipes
ENSPMAG00000002487	-	100	45.263	ENSORLG00020006026	nup153	57	38.710	Oryzias_latipes_hni
ENSPMAG00000002487	-	100	67.568	ENSORLG00015013823	nup153	58	67.568	Oryzias_latipes_hsok
ENSPMAG00000002487	-	100	43.925	ENSOMEG00000012062	nup153	58	45.794	Oryzias_melastigma
ENSPMAG00000002487	-	100	51.351	ENSOGAG00000014899	NUP153	58	51.351	Otolemur_garnettii
ENSPMAG00000002487	-	99	35.915	ENSOARG00000011514	NUP153	59	37.500	Ovis_aries
ENSPMAG00000002487	-	100	36.567	ENSPPAG00000029729	NUP153	57	40.594	Pan_paniscus
ENSPMAG00000002487	-	100	51.351	ENSPPRG00000006160	NUP153	58	51.351	Panthera_pardus
ENSPMAG00000002487	-	100	51.351	ENSPTIG00000017212	NUP153	58	51.351	Panthera_tigris_altaica
ENSPMAG00000002487	-	100	36.567	ENSPTRG00000017752	NUP153	63	36.353	Pan_troglodytes
ENSPMAG00000002487	-	100	36.957	ENSPANG00000015139	NUP153	58	35.958	Papio_anubis
ENSPMAG00000002487	-	100	46.154	ENSPKIG00000001734	nup153	52	35.267	Paramormyrops_kingsleyae
ENSPMAG00000002487	-	99	38.122	ENSPSIG00000017226	NUP153	59	38.378	Pelodiscus_sinensis
ENSPMAG00000002487	-	100	47.191	ENSPMGG00000001716	nup153	58	47.191	Periophthalmus_magnuspinnatus
ENSPMAG00000002487	-	100	34.498	ENSPEMG00000020772	Nup153	57	51.351	Peromyscus_maniculatus_bairdii
ENSPMAG00000002487	-	99	35.227	ENSPCIG00000029680	NUP153	57	54.054	Phascolarctos_cinereus
ENSPMAG00000002487	-	100	47.664	ENSPFOG00000013146	nup153	60	48.598	Poecilia_formosa
ENSPMAG00000002487	-	100	46.825	ENSPMEG00000021677	nup153	58	49.057	Poecilia_mexicana
ENSPMAG00000002487	-	100	47.619	ENSPREG00000007463	nup153	57	50.000	Poecilia_reticulata
ENSPMAG00000002487	-	100	36.264	ENSPCOG00000014488	NUP153	56	37.037	Propithecus_coquereli
ENSPMAG00000002487	-	100	54.054	ENSPVAG00000012632	NUP153	59	54.054	Pteropus_vampyrus
ENSPMAG00000002487	-	100	44.340	ENSPNYG00000011225	nup153	57	48.529	Pundamilia_nyererei
ENSPMAG00000002487	-	100	47.706	ENSPNAG00000024377	nup153	57	47.706	Pygocentrus_nattereri
ENSPMAG00000002487	-	100	37.063	ENSRNOG00000001456	Nup153	57	35.947	Rattus_norvegicus
ENSPMAG00000002487	-	100	48.649	ENSRBIG00000041878	NUP153	57	48.649	Rhinopithecus_bieti
ENSPMAG00000002487	-	100	48.649	ENSRROG00000029849	NUP153	59	48.649	Rhinopithecus_roxellana
ENSPMAG00000002487	-	100	37.594	ENSSBOG00000024532	NUP153	57	39.259	Saimiri_boliviensis_boliviensis
ENSPMAG00000002487	-	68	34.669	ENSSHAG00000016087	-	64	54.054	Sarcophilus_harrisii
ENSPMAG00000002487	-	100	64.865	ENSSFOG00015011040	nup153	51	58.000	Scleropages_formosus
ENSPMAG00000002487	-	100	42.857	ENSSMAG00000008418	nup153	56	46.729	Scophthalmus_maximus
ENSPMAG00000002487	-	100	44.340	ENSSDUG00000010779	nup153	57	46.226	Seriola_dumerili
ENSPMAG00000002487	-	100	35.252	ENSSPUG00000016687	NUP153	57	35.821	Sphenodon_punctatus
ENSPMAG00000002487	-	100	41.509	ENSSPAG00000014945	nup153	57	45.283	Stegastes_partitus
ENSPMAG00000002487	-	100	36.718	ENSSSCG00000026034	NUP153	58	45.946	Sus_scrofa
ENSPMAG00000002487	-	99	37.209	ENSTGUG00000005917	NUP153	59	32.896	Taeniopygia_guttata
ENSPMAG00000002487	-	100	45.794	ENSTRUG00000010163	nup153	57	50.000	Takifugu_rubripes
ENSPMAG00000002487	-	99	62.500	ENSTNIG00000009182	nup153	58	58.000	Tetraodon_nigroviridis
ENSPMAG00000002487	-	99	54.054	ENSUMAG00000017135	NUP153	51	54.054	Ursus_maritimus
ENSPMAG00000002487	-	100	54.054	ENSVPAG00000002072	NUP153	58	54.054	Vicugna_pacos
ENSPMAG00000002487	-	100	54.054	ENSVVUG00000003265	NUP153	59	46.429	Vulpes_vulpes
ENSPMAG00000002487	-	100	35.165	ENSXETG00000014197	nup153	59	35.165	Xenopus_tropicalis
ENSPMAG00000002487	-	100	50.000	ENSXCOG00000020098	nup153	58	50.000	Xiphophorus_couchianus
ENSPMAG00000002487	-	100	47.619	ENSXMAG00000003437	nup153	58	50.000	Xiphophorus_maculatus