EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002576 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 15129 bases
Position: chrGL484528:42388-57516
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002816	XRN_N	PF03159.18	9.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002829	-	1017	-	ENSPMAP00000002816	339 (aa)	-	S4RC84

Gene Model

Click here to download ENSPMAG00000002576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002576	xrn2	98	69.940	ENSACIG00000015047	xrn2	60	69.940	Amphilophus_citrinellus
ENSPMAG00000002576	xrn2	99	68.437	ENSACLG00000010522	xrn2	59	67.847	Astatotilapia_calliptera
ENSPMAG00000002576	xrn2	100	61.584	ENSCSAVG00000011217	-	67	61.290	Ciona_savignyi
ENSPMAG00000002576	xrn2	100	65.782	ENSCSEG00000005628	xrn2	65	64.897	Cynoglossus_semilaevis
ENSPMAG00000002576	xrn2	99	72.941	ENSCVAG00000018999	xrn2	62	72.941	Cyprinodon_variegatus
ENSPMAG00000002576	xrn2	99	77.219	ENSDARG00000101900	xrn2	61	75.444	Danio_rerio
ENSPMAG00000002576	xrn2	99	63.050	ENSFHEG00000013039	xrn2	61	63.050	Fundulus_heteroclitus
ENSPMAG00000002576	xrn2	99	72.941	ENSGAFG00000014284	xrn2	59	73.333	Gambusia_affinis
ENSPMAG00000002576	xrn2	98	74.474	ENSGACG00000011870	xrn2	60	74.474	Gasterosteus_aculeatus
ENSPMAG00000002576	xrn2	99	67.847	ENSHBUG00000005077	xrn2	59	67.847	Haplochromis_burtoni
ENSPMAG00000002576	xrn2	98	73.952	ENSLBEG00000010041	xrn2	65	73.952	Labrus_bergylta
ENSPMAG00000002576	xrn2	99	72.861	ENSMZEG00005022362	xrn2	59	67.847	Maylandia_zebra
ENSPMAG00000002576	xrn2	99	73.235	ENSMMOG00000017576	xrn2	59	67.059	Mola_mola
ENSPMAG00000002576	xrn2	99	74.118	ENSMALG00000011355	xrn2	60	74.118	Monopterus_albus
ENSPMAG00000002576	xrn2	98	73.433	ENSNBRG00000008062	xrn2	59	68.358	Neolamprologus_brichardi
ENSPMAG00000002576	xrn2	99	68.437	ENSPNYG00000001765	xrn2	59	63.127	Pundamilia_nyererei
ENSPMAG00000002576	xrn2	99	72.941	ENSXMAG00000000242	xrn2	60	74.074	Xiphophorus_maculatus