EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002700 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: -
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 30077 bases
Position: chrGL477049:1899-31975
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000002977	La	PF05383.17	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000002991	-	3033	-	ENSPMAP00000002977	955 (aa)	-	S4RCP5

Gene Model

Click here to download ENSPMAG00000002700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002700	larp1b	97	53.340	ENSG00000138709	LARP1B	94	52.102	Homo_sapiens
ENSPMAG00000002700	larp1b	96	49.043	ENSAPOG00000020101	larp1b	77	55.866	Acanthochromis_polyacanthus
ENSPMAG00000002700	larp1b	61	48.235	ENSAMEG00000002748	LARP1B	99	45.378	Ailuropoda_melanoleuca
ENSPMAG00000002700	larp1b	95	48.401	ENSACIG00000023890	larp1b	65	53.645	Amphilophus_citrinellus
ENSPMAG00000002700	larp1b	75	52.514	ENSAOCG00000014268	larp1b	67	56.454	Amphiprion_ocellaris
ENSPMAG00000002700	larp1b	97	49.432	ENSAPEG00000004126	larp1b	60	56.571	Amphiprion_percula
ENSPMAG00000002700	larp1b	98	48.849	ENSATEG00000017849	larp1b	63	55.491	Anabas_testudineus
ENSPMAG00000002700	larp1b	97	52.648	ENSAPLG00000010129	LARP1B	73	58.442	Anas_platyrhynchos
ENSPMAG00000002700	larp1b	94	54.675	ENSACAG00000011338	LARP1B	66	59.680	Anolis_carolinensis
ENSPMAG00000002700	larp1b	75	48.922	ENSANAG00000034618	LARP1B	70	50.812	Aotus_nancymaae
ENSPMAG00000002700	larp1b	96	49.380	ENSACLG00000011948	larp1b	59	54.885	Astatotilapia_calliptera
ENSPMAG00000002700	larp1b	75	48.545	ENSAMXG00000006805	larp1b	62	53.056	Astyanax_mexicanus
ENSPMAG00000002700	larp1b	99	52.972	ENSBTAG00000012135	LARP1B	98	43.038	Bos_taurus
ENSPMAG00000002700	larp1b	94	52.903	ENSCJAG00000003338	LARP1B	99	51.638	Callithrix_jacchus
ENSPMAG00000002700	larp1b	97	53.838	ENSCAFG00000003831	LARP1B	94	50.717	Canis_familiaris
ENSPMAG00000002700	larp1b	97	53.376	ENSCAFG00020018899	LARP1B	92	50.658	Canis_lupus_dingo
ENSPMAG00000002700	larp1b	94	52.694	ENSCHIG00000023144	LARP1B	71	58.417	Capra_hircus
ENSPMAG00000002700	larp1b	97	52.013	ENSCCAG00000021948	LARP1B	94	51.659	Cebus_capucinus
ENSPMAG00000002700	larp1b	95	54.171	ENSCATG00000013541	LARP1B	94	51.549	Cercocebus_atys
ENSPMAG00000002700	larp1b	94	53.471	ENSCSAG00000003582	LARP1B	94	51.819	Chlorocebus_sabaeus
ENSPMAG00000002700	larp1b	97	48.305	ENSCHOG00000005354	LARP1B	75	54.470	Choloepus_hoffmanni
ENSPMAG00000002700	larp1b	97	54.083	ENSCPBG00000017480	LARP1B	62	60.519	Chrysemys_picta_bellii
ENSPMAG00000002700	larp1b	94	51.407	ENSCANG00000026958	LARP1B	75	58.226	Colobus_angolensis_palliatus
ENSPMAG00000002700	larp1b	96	47.639	ENSCSEG00000013519	larp1b	60	54.986	Cynoglossus_semilaevis
ENSPMAG00000002700	larp1b	96	50.103	ENSCVAG00000005046	larp1b	64	55.263	Cyprinodon_variegatus
ENSPMAG00000002700	larp1b	99	48.185	ENSDARG00000061169	larp1b	61	55.820	Danio_rerio
ENSPMAG00000002700	larp1b	56	47.786	ENSDNOG00000018765	-	98	45.167	Dasypus_novemcinctus
ENSPMAG00000002700	larp1b	84	51.754	ENSETEG00000012497	LARP1B	79	52.474	Echinops_telfairi
ENSPMAG00000002700	larp1b	95	50.470	ENSEBUG00000003668	larp1b	71	54.878	Eptatretus_burgeri
ENSPMAG00000002700	larp1b	94	54.037	ENSEASG00005018106	LARP1B	96	44.606	Equus_asinus_asinus
ENSPMAG00000002700	larp1b	96	54.729	ENSECAG00000001088	LARP1B	59	59.130	Equus_caballus
ENSPMAG00000002700	larp1b	67	49.321	ENSELUG00000023774	larp1b	69	49.623	Esox_lucius
ENSPMAG00000002700	larp1b	58	47.227	ENSFCAG00000014650	-	99	44.086	Felis_catus
ENSPMAG00000002700	larp1b	94	52.221	ENSFALG00000008098	LARP1B	73	58.262	Ficedula_albicollis
ENSPMAG00000002700	larp1b	99	48.110	ENSFHEG00000010264	larp1b	61	55.745	Fundulus_heteroclitus
ENSPMAG00000002700	larp1b	90	50.670	ENSGMOG00000005207	larp1b	74	51.645	Gadus_morhua
ENSPMAG00000002700	larp1b	97	52.326	ENSGALG00000010207	LARP1B	63	58.032	Gallus_gallus
ENSPMAG00000002700	larp1b	82	65.625	ENSGAFG00000012012	larp1b	74	65.625	Gambusia_affinis
ENSPMAG00000002700	larp1b	99	50.605	ENSGACG00000004609	larp1b	62	55.119	Gasterosteus_aculeatus
ENSPMAG00000002700	larp1b	99	53.423	ENSGAGG00000017209	LARP1B	62	60.086	Gopherus_agassizii
ENSPMAG00000002700	larp1b	94	53.145	ENSGGOG00000015900	LARP1B	94	52.212	Gorilla_gorilla
ENSPMAG00000002700	larp1b	96	48.973	ENSHBUG00000009730	larp1b	62	55.252	Haplochromis_burtoni
ENSPMAG00000002700	larp1b	75	54.582	ENSHCOG00000000918	larp1b	92	55.733	Hippocampus_comes
ENSPMAG00000002700	larp1b	86	50.932	ENSIPUG00000012138	larp1b	64	54.459	Ictalurus_punctatus
ENSPMAG00000002700	larp1b	98	50.951	ENSKMAG00000011589	larp1b	66	54.741	Kryptolebias_marmoratus
ENSPMAG00000002700	larp1b	99	50.261	ENSLBEG00000005655	larp1b	63	57.184	Labrus_bergylta
ENSPMAG00000002700	larp1b	98	55.485	ENSLACG00000015247	LARP1B	60	59.828	Latimeria_chalumnae
ENSPMAG00000002700	larp1b	99	54.242	ENSLOCG00000010684	larp1b	67	60.913	Lepisosteus_oculatus
ENSPMAG00000002700	larp1b	94	53.579	ENSMFAG00000002218	LARP1B	94	52.323	Macaca_fascicularis
ENSPMAG00000002700	larp1b	94	53.579	ENSMMUG00000021347	LARP1B	94	52.323	Macaca_mulatta
ENSPMAG00000002700	larp1b	84	57.872	ENSMNEG00000030406	LARP1B	86	56.737	Macaca_nemestrina
ENSPMAG00000002700	larp1b	94	54.139	ENSMLEG00000009306	LARP1B	74	58.226	Mandrillus_leucophaeus
ENSPMAG00000002700	larp1b	99	49.452	ENSMAMG00000000081	larp1b	64	55.460	Mastacembelus_armatus
ENSPMAG00000002700	larp1b	75	54.345	ENSMZEG00005002545	larp1b	82	54.993	Maylandia_zebra
ENSPMAG00000002700	larp1b	95	49.268	ENSMGAG00000004809	LARP1B	73	55.780	Meleagris_gallopavo
ENSPMAG00000002700	larp1b	56	38.745	ENSMICG00000028052	-	67	41.399	Microcebus_murinus
ENSPMAG00000002700	larp1b	97	53.789	ENSMICG00000036111	LARP1B	94	53.296	Microcebus_murinus
ENSPMAG00000002700	larp1b	98	54.536	ENSMODG00000012300	LARP1B	59	58.014	Monodelphis_domestica
ENSPMAG00000002700	larp1b	99	48.104	ENSMALG00000003638	larp1b	64	54.598	Monopterus_albus
ENSPMAG00000002700	larp1b	98	54.968	ENSMPUG00000017365	LARP1B	61	58.136	Mustela_putorius_furo
ENSPMAG00000002700	larp1b	97	52.336	ENSMLUG00000010229	LARP1B	72	59.393	Myotis_lucifugus
ENSPMAG00000002700	larp1b	78	65.625	ENSNBRG00000023846	larp1b	69	65.625	Neolamprologus_brichardi
ENSPMAG00000002700	larp1b	94	52.438	ENSNLEG00000013819	LARP1B	94	51.492	Nomascus_leucogenys
ENSPMAG00000002700	larp1b	71	54.494	ENSMEUG00000010308	LARP1B	71	53.695	Notamacropus_eugenii
ENSPMAG00000002700	larp1b	89	47.685	ENSOPRG00000005478	LARP1B	67	58.084	Ochotona_princeps
ENSPMAG00000002700	larp1b	96	49.324	ENSONIG00000012386	larp1b	70	54.648	Oreochromis_niloticus
ENSPMAG00000002700	larp1b	97	51.230	ENSOCUG00000013330	LARP1B	71	56.566	Oryctolagus_cuniculus
ENSPMAG00000002700	larp1b	97	49.844	ENSORLG00000017954	larp1b	60	57.287	Oryzias_latipes
ENSPMAG00000002700	larp1b	97	49.792	ENSORLG00020013081	larp1b	60	57.081	Oryzias_latipes_hni
ENSPMAG00000002700	larp1b	97	49.845	ENSORLG00015009580	larp1b	60	57.143	Oryzias_latipes_hsok
ENSPMAG00000002700	larp1b	97	49.845	ENSOMEG00000004210	larp1b	63	56.633	Oryzias_melastigma
ENSPMAG00000002700	larp1b	97	53.142	ENSOGAG00000005771	LARP1B	74	58.406	Otolemur_garnettii
ENSPMAG00000002700	larp1b	95	52.304	ENSOARG00000015300	LARP1B	73	57.736	Ovis_aries
ENSPMAG00000002700	larp1b	94	53.254	ENSPPAG00000030439	LARP1B	94	52.323	Pan_paniscus
ENSPMAG00000002700	larp1b	58	47.227	ENSPPRG00000002743	-	99	44.086	Panthera_pardus
ENSPMAG00000002700	larp1b	58	47.227	ENSPTIG00000011225	LARP1B	99	44.086	Panthera_tigris_altaica
ENSPMAG00000002700	larp1b	94	53.254	ENSPTRG00000016437	LARP1B	94	52.323	Pan_troglodytes
ENSPMAG00000002700	larp1b	94	53.579	ENSPANG00000012488	LARP1B	94	52.323	Papio_anubis
ENSPMAG00000002700	larp1b	72	53.980	ENSPKIG00000014360	larp1b	71	53.701	Paramormyrops_kingsleyae
ENSPMAG00000002700	larp1b	95	54.951	ENSPSIG00000012885	LARP1B	71	59.448	Pelodiscus_sinensis
ENSPMAG00000002700	larp1b	77	55.168	ENSPMGG00000007207	larp1b	77	55.248	Periophthalmus_magnuspinnatus
ENSPMAG00000002700	larp1b	98	52.929	ENSPCIG00000026516	LARP1B	88	58.721	Phascolarctos_cinereus
ENSPMAG00000002700	larp1b	99	48.235	ENSPFOG00000019519	larp1b	62	55.328	Poecilia_formosa
ENSPMAG00000002700	larp1b	99	50.150	ENSPLAG00000007115	larp1b	61	57.223	Poecilia_latipinna
ENSPMAG00000002700	larp1b	99	49.384	ENSPMEG00000001224	larp1b	64	57.504	Poecilia_mexicana
ENSPMAG00000002700	larp1b	97	51.366	ENSPCAG00000007546	LARP1B	73	56.286	Procavia_capensis
ENSPMAG00000002700	larp1b	97	42.585	ENSPCOG00000021874	LARP1B	93	71.111	Propithecus_coquereli
ENSPMAG00000002700	larp1b	97	51.121	ENSPVAG00000005373	LARP1B	94	49.439	Pteropus_vampyrus
ENSPMAG00000002700	larp1b	75	55.021	ENSPNYG00000017357	larp1b	83	55.298	Pundamilia_nyererei
ENSPMAG00000002700	larp1b	95	49.026	ENSPNAG00000008823	larp1b	64	57.345	Pygocentrus_nattereri
ENSPMAG00000002700	larp1b	57	46.196	ENSRBIG00000039982	-	99	44.727	Rhinopithecus_bieti
ENSPMAG00000002700	larp1b	94	53.254	ENSRROG00000030771	LARP1B	94	52.323	Rhinopithecus_roxellana
ENSPMAG00000002700	larp1b	73	50.208	ENSSHAG00000014474	LARP1B	70	53.045	Sarcophilus_harrisii
ENSPMAG00000002700	larp1b	96	50.000	ENSSMAG00000006347	larp1b	70	55.245	Scophthalmus_maximus
ENSPMAG00000002700	larp1b	96	50.420	ENSSDUG00000004182	larp1b	64	56.381	Seriola_dumerili
ENSPMAG00000002700	larp1b	74	53.521	ENSSLDG00000014613	larp1b	76	54.638	Seriola_lalandi_dorsalis
ENSPMAG00000002700	larp1b	93	50.386	ENSSPUG00000011837	LARP1B	74	55.954	Sphenodon_punctatus
ENSPMAG00000002700	larp1b	99	49.597	ENSSPAG00000017772	larp1b	65	54.472	Stegastes_partitus
ENSPMAG00000002700	larp1b	97	53.822	ENSSSCG00000034280	LARP1B	98	74.444	Sus_scrofa
ENSPMAG00000002700	larp1b	80	53.325	ENSTGUG00000002098	-	78	57.020	Taeniopygia_guttata
ENSPMAG00000002700	larp1b	96	48.649	ENSTRUG00000005612	larp1b	60	53.372	Takifugu_rubripes
ENSPMAG00000002700	larp1b	96	49.649	ENSTNIG00000012398	larp1b	78	56.792	Tetraodon_nigroviridis
ENSPMAG00000002700	larp1b	81	49.779	ENSTBEG00000004177	LARP1B	71	48.485	Tupaia_belangeri
ENSPMAG00000002700	larp1b	86	52.281	ENSTTRG00000012984	LARP1B	73	55.587	Tursiops_truncatus
ENSPMAG00000002700	larp1b	96	53.953	ENSUMAG00000007373	LARP1B	92	52.561	Ursus_maritimus
ENSPMAG00000002700	larp1b	94	46.386	ENSVPAG00000007223	LARP1B	73	52.217	Vicugna_pacos
ENSPMAG00000002700	larp1b	97	53.945	ENSVVUG00000011307	LARP1B	99	51.104	Vulpes_vulpes
ENSPMAG00000002700	larp1b	97	49.309	ENSXETG00000022512	larp1b	65	55.289	Xenopus_tropicalis
ENSPMAG00000002700	larp1b	73	52.851	ENSXCOG00000004435	larp1b	65	53.561	Xiphophorus_couchianus
ENSPMAG00000002700	larp1b	99	50.402	ENSXMAG00000008150	larp1b	65	55.191	Xiphophorus_maculatus