EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002788 (Gene tree)
Gene ID: -
Gene Symbol: LARP4
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 10512 bases
Position: chrGL476485:82708-93219
Accession: 24320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003037	La	PF05383.17	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003052	LARP4-201	1584	-	ENSPMAP00000003037	528 (aa)	-	S4RCV5

Gene Model

Click here to download ENSPMAG00000002788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002788	LARP4	98	41.423	ENSG00000161813	LARP4	72	72.794	Homo_sapiens
ENSPMAG00000002788	LARP4	81	58.498	ENSAPOG00000007142	larp4aa	53	58.468	Acanthochromis_polyacanthus
ENSPMAG00000002788	LARP4	98	40.984	ENSAPOG00000021331	larp4ab	72	40.575	Acanthochromis_polyacanthus
ENSPMAG00000002788	LARP4	82	57.752	ENSAOCG00000002408	larp4aa	53	57.708	Amphiprion_ocellaris
ENSPMAG00000002788	LARP4	98	41.068	ENSAOCG00000006387	larp4ab	72	41.133	Amphiprion_ocellaris
ENSPMAG00000002788	LARP4	82	57.752	ENSAPEG00000019058	larp4aa	53	57.708	Amphiprion_percula
ENSPMAG00000002788	LARP4	51	53.875	ENSAPEG00000015441	larp4ab	57	67.769	Amphiprion_percula
ENSPMAG00000002788	LARP4	98	42.125	ENSANAG00000029342	LARP4	64	56.180	Aotus_nancymaae
ENSPMAG00000002788	LARP4	98	43.728	ENSAMXG00000036493	larp4aa	67	42.218	Astyanax_mexicanus
ENSPMAG00000002788	LARP4	98	42.495	ENSCJAG00000021131	LARP4	64	56.180	Callithrix_jacchus
ENSPMAG00000002788	LARP4	98	41.045	ENSTSYG00000004342	LARP4	64	56.506	Carlito_syrichta
ENSPMAG00000002788	LARP4	98	38.182	ENSCPOG00000020519	LARP4	70	37.975	Cavia_porcellus
ENSPMAG00000002788	LARP4	84	74.510	ENSCCAG00000024439	LARP4	64	56.180	Cebus_capucinus
ENSPMAG00000002788	LARP4	98	40.850	ENSCANG00000029159	-	64	56.554	Colobus_angolensis_palliatus
ENSPMAG00000002788	LARP4	96	38.196	ENSCANG00000033097	-	55	68.504	Colobus_angolensis_palliatus
ENSPMAG00000002788	LARP4	82	58.498	ENSCSEG00000001963	larp4aa	52	58.468	Cynoglossus_semilaevis
ENSPMAG00000002788	LARP4	78	57.708	ENSCVAG00000005488	larp4aa	51	57.661	Cyprinodon_variegatus
ENSPMAG00000002788	LARP4	98	42.226	ENSDARG00000078401	larp4aa	69	42.039	Danio_rerio
ENSPMAG00000002788	LARP4	98	41.852	ENSDARG00000074979	larp4ab	78	70.290	Danio_rerio
ENSPMAG00000002788	LARP4	78	49.773	ENSEBUG00000004426	LARP4	73	48.394	Eptatretus_burgeri
ENSPMAG00000002788	LARP4	98	38.961	ENSEASG00005004356	LARP4	66	50.562	Equus_asinus_asinus
ENSPMAG00000002788	LARP4	78	56.589	ENSELUG00000000395	larp4aa	51	55.814	Esox_lucius
ENSPMAG00000002788	LARP4	98	40.858	ENSFCAG00000031897	LARP4	64	56.506	Felis_catus
ENSPMAG00000002788	LARP4	97	41.741	ENSFHEG00000004338	larp4aa	52	59.274	Fundulus_heteroclitus
ENSPMAG00000002788	LARP4	97	41.978	ENSGACG00000008381	larp4aa	65	58.065	Gasterosteus_aculeatus
ENSPMAG00000002788	LARP4	98	42.115	ENSGGOG00000015230	LARP4	69	56.180	Gorilla_gorilla
ENSPMAG00000002788	LARP4	54	47.403	ENSHGLG00000010979	-	62	49.627	Heterocephalus_glaber_female
ENSPMAG00000002788	LARP4	54	47.403	ENSHGLG00100002832	-	62	49.627	Heterocephalus_glaber_male
ENSPMAG00000002788	LARP4	78	55.859	ENSHCOG00000015951	larp4aa	52	55.731	Hippocampus_comes
ENSPMAG00000002788	LARP4	97	39.671	ENSHCOG00000020857	larp4ab	56	52.823	Hippocampus_comes
ENSPMAG00000002788	LARP4	98	40.566	ENSIPUG00000021659	larp4ab	71	40.335	Ictalurus_punctatus
ENSPMAG00000002788	LARP4	78	47.653	ENSKMAG00000018556	larp4ab	72	38.686	Kryptolebias_marmoratus
ENSPMAG00000002788	LARP4	79	57.364	ENSKMAG00000006800	larp4aa	53	57.312	Kryptolebias_marmoratus
ENSPMAG00000002788	LARP4	78	46.154	ENSLBEG00000014537	larp4aa	54	57.312	Labrus_bergylta
ENSPMAG00000002788	LARP4	98	41.081	ENSLOCG00000007113	larp4ab	67	40.876	Lepisosteus_oculatus
ENSPMAG00000002788	LARP4	98	41.744	ENSMFAG00000043681	LARP4	64	56.554	Macaca_fascicularis
ENSPMAG00000002788	LARP4	98	41.026	ENSMMUG00000008172	LARP4	64	56.554	Macaca_mulatta
ENSPMAG00000002788	LARP4	80	61.818	ENSMNEG00000037799	-	74	53.846	Macaca_nemestrina
ENSPMAG00000002788	LARP4	99	40.909	ENSMLEG00000039661	LARP4	64	56.089	Mandrillus_leucophaeus
ENSPMAG00000002788	LARP4	78	57.364	ENSMAMG00000011206	larp4aa	53	57.312	Mastacembelus_armatus
ENSPMAG00000002788	LARP4	99	41.026	ENSMICG00000012388	-	76	55.351	Microcebus_murinus
ENSPMAG00000002788	LARP4	76	46.782	ENSMICG00000030156	-	73	66.667	Microcebus_murinus
ENSPMAG00000002788	LARP4	99	43.013	ENSMOCG00000020635	Larp4	79	42.473	Microtus_ochrogaster
ENSPMAG00000002788	LARP4	98	40.341	ENSMMOG00000021861	larp4ab	72	48.689	Mola_mola
ENSPMAG00000002788	LARP4	98	38.571	ENSMMOG00000004785	larp4aa	52	51.383	Mola_mola
ENSPMAG00000002788	LARP4	70	63.761	MGP_CAROLIEiJ_G0020281	Larp4	65	56.538	Mus_caroli
ENSPMAG00000002788	LARP4	98	41.636	ENSMUSG00000023025	Larp4	65	46.009	Mus_musculus
ENSPMAG00000002788	LARP4	99	40.917	MGP_PahariEiJ_G0020284	Larp4	72	40.472	Mus_pahari
ENSPMAG00000002788	LARP4	98	40.951	ENSNLEG00000017798	LARP4	64	56.554	Nomascus_leucogenys
ENSPMAG00000002788	LARP4	78	57.752	ENSONIG00000011895	larp4aa	56	57.708	Oreochromis_niloticus
ENSPMAG00000002788	LARP4	80	44.494	ENSONIG00000019124	larp4ab	58	51.515	Oreochromis_niloticus
ENSPMAG00000002788	LARP4	77	47.529	ENSOANG00000004373	LARP4	72	45.735	Ornithorhynchus_anatinus
ENSPMAG00000002788	LARP4	98	41.835	ENSOCUG00000026872	-	71	42.086	Oryctolagus_cuniculus
ENSPMAG00000002788	LARP4	97	42.647	ENSORLG00000006758	larp4aa	52	57.708	Oryzias_latipes
ENSPMAG00000002788	LARP4	85	58.498	ENSORLG00020010258	larp4aa	52	57.708	Oryzias_latipes_hni
ENSPMAG00000002788	LARP4	97	41.176	ENSORLG00015002292	larp4aa	52	57.708	Oryzias_latipes_hsok
ENSPMAG00000002788	LARP4	83	58.893	ENSOMEG00000019749	larp4aa	71	71.642	Oryzias_melastigma
ENSPMAG00000002788	LARP4	55	47.059	ENSPPAG00000039122	-	59	46.768	Pan_paniscus
ENSPMAG00000002788	LARP4	98	41.144	ENSPPRG00000004522	LARP4	64	56.506	Panthera_pardus
ENSPMAG00000002788	LARP4	98	41.144	ENSPTIG00000015617	LARP4	64	56.506	Panthera_tigris_altaica
ENSPMAG00000002788	LARP4	98	41.606	ENSPTRG00000004935	LARP4	64	56.180	Pan_troglodytes
ENSPMAG00000002788	LARP4	55	47.279	ENSPTRG00000045907	-	64	47.674	Pan_troglodytes
ENSPMAG00000002788	LARP4	98	41.026	ENSPANG00000022964	LARP4	64	56.554	Papio_anubis
ENSPMAG00000002788	LARP4	98	40.734	ENSPKIG00000005950	larp4ab	54	55.731	Paramormyrops_kingsleyae
ENSPMAG00000002788	LARP4	99	41.336	ENSPCIG00000000384	LARP4	72	41.575	Phascolarctos_cinereus
ENSPMAG00000002788	LARP4	97	41.030	ENSPFOG00000013148	larp4aa	52	58.468	Poecilia_formosa
ENSPMAG00000002788	LARP4	97	41.250	ENSPMEG00000014271	larp4aa	52	58.468	Poecilia_mexicana
ENSPMAG00000002788	LARP4	51	53.558	ENSPREG00000016263	larp4ab	65	65.693	Poecilia_reticulata
ENSPMAG00000002788	LARP4	77	45.735	ENSPPYG00000004512	-	50	56.180	Pongo_abelii
ENSPMAG00000002788	LARP4	72	61.638	ENSPCAG00000003671	LARP4	56	60.793	Procavia_capensis
ENSPMAG00000002788	LARP4	78	56.439	ENSPCOG00000026291	LARP4	54	74.510	Propithecus_coquereli
ENSPMAG00000002788	LARP4	98	42.726	ENSPNAG00000024770	larp4aa	69	42.153	Pygocentrus_nattereri
ENSPMAG00000002788	LARP4	78	45.688	ENSRBIG00000038857	-	59	55.926	Rhinopithecus_bieti
ENSPMAG00000002788	LARP4	57	63.694	ENSRBIG00000036890	-	54	63.694	Rhinopithecus_bieti
ENSPMAG00000002788	LARP4	78	58.113	ENSRROG00000042764	-	64	56.554	Rhinopithecus_roxellana
ENSPMAG00000002788	LARP4	57	63.694	ENSRROG00000025487	-	74	51.460	Rhinopithecus_roxellana
ENSPMAG00000002788	LARP4	98	41.906	ENSSBOG00000026650	LARP4	64	55.805	Saimiri_boliviensis_boliviensis
ENSPMAG00000002788	LARP4	55	54.333	ENSSHAG00000013246	-	72	57.937	Sarcophilus_harrisii
ENSPMAG00000002788	LARP4	97	44.636	ENSSFOG00015003868	larp4aa	71	43.273	Scleropages_formosus
ENSPMAG00000002788	LARP4	98	40.265	ENSSFOG00015014096	larp4ab	72	39.547	Scleropages_formosus
ENSPMAG00000002788	LARP4	98	41.250	ENSSMAG00000019473	larp4aa	52	57.708	Scophthalmus_maximus
ENSPMAG00000002788	LARP4	78	57.752	ENSSDUG00000010621	larp4aa	53	57.708	Seriola_dumerili
ENSPMAG00000002788	LARP4	79	58.140	ENSSPAG00000007222	larp4aa	75	68.966	Stegastes_partitus
ENSPMAG00000002788	LARP4	98	41.392	ENSSPAG00000002172	larp4ab	72	39.344	Stegastes_partitus
ENSPMAG00000002788	LARP4	98	36.197	ENSTBEG00000005167	LARP4	53	47.368	Tupaia_belangeri
ENSPMAG00000002788	LARP4	77	46.062	ENSUAMG00000013764	LARP4	70	45.498	Ursus_americanus
ENSPMAG00000002788	LARP4	100	41.091	ENSXETG00000007283	larp4	78	41.758	Xenopus_tropicalis
ENSPMAG00000002788	LARP4	97	40.108	ENSXCOG00000006387	larp4aa	72	37.852	Xiphophorus_couchianus
ENSPMAG00000002788	LARP4	50	54.198	ENSXCOG00000019635	larp4ab	63	67.910	Xiphophorus_couchianus
ENSPMAG00000002788	LARP4	97	41.030	ENSXMAG00000010519	larp4aa	68	39.432	Xiphophorus_maculatus