EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMAG00000002836 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4 (1 of many)
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
19358 bases
Position
chrGL477775:20845-40202
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000003107RRM_1PF00076.226.4e-9014
ENSPMAP00000003107RRM_1PF00076.226.4e-9024
ENSPMAP00000003107RRM_1PF00076.226.4e-9034
ENSPMAP00000003107RRM_1PF00076.226.4e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000003122-2020-ENSPMAP00000003107572 (aa)-S4RD25
Gene Model
Click here to download ENSPMAG00000002836's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002836's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMAG00000002836pabpc46334.177ENSPMAG00000006529tia1l7034.177
ENSPMAG00000002836pabpc49968.161ENSPMAG00000007885pabpc48667.416
ENSPMAG00000002836pabpc46231.073ENSPMAG00000008735HNRNPA08431.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000002836pabpc410073.601ENSG00000090621PABPC410095.349Homo_sapiens
ENSPMAG00000002836pabpc410076.132ENSAPOG00000001161pabpc48875.436Acanthochromis_polyacanthus
ENSPMAG00000002836pabpc49743.885ENSAMEG00000015083-6850.467Ailuropoda_melanoleuca
ENSPMAG00000002836pabpc410070.297ENSAMEG00000011535-8970.132Ailuropoda_melanoleuca
ENSPMAG00000002836pabpc410075.958ENSACIG00000023343pabpc48875.261Amphilophus_citrinellus
ENSPMAG00000002836pabpc410075.958ENSAOCG00000021529pabpc48875.261Amphiprion_ocellaris
ENSPMAG00000002836pabpc410075.958ENSAPEG00000019196pabpc48875.261Amphiprion_percula
ENSPMAG00000002836pabpc410075.478ENSATEG00000007402pabpc48874.783Anabas_testudineus
ENSPMAG00000002836pabpc49975.838ENSAPLG00000009729-8975.309Anas_platyrhynchos
ENSPMAG00000002836pabpc49973.518ENSACAG00000002544PABPC48772.530Anolis_carolinensis
ENSPMAG00000002836pabpc410073.196ENSANAG00000025079PABPC48973.484Aotus_nancymaae
ENSPMAG00000002836pabpc410075.958ENSACLG00000019558pabpc48875.087Astatotilapia_calliptera
ENSPMAG00000002836pabpc49970.351ENSAMXG00000018779pabpc48769.474Astyanax_mexicanus
ENSPMAG00000002836pabpc410071.743ENSBTAG00000017125PABPC48971.235Bos_taurus
ENSPMAG00000002836pabpc46483.636ENSBTAG00000048536-9383.636Bos_taurus
ENSPMAG00000002836pabpc48764.173ENSCJAG00000045953-7275.532Callithrix_jacchus
ENSPMAG00000002836pabpc410073.196ENSCJAG00000002512-8973.484Callithrix_jacchus
ENSPMAG00000002836pabpc410074.177ENSCAFG00000003081PABPC48973.657Canis_familiaris
ENSPMAG00000002836pabpc410074.177ENSCAFG00020004161PABPC48970.297Canis_lupus_dingo
ENSPMAG00000002836pabpc410070.627ENSCHIG00000019398-8970.297Capra_hircus
ENSPMAG00000002836pabpc410058.291ENSCHIG00000023385-8957.751Capra_hircus
ENSPMAG00000002836pabpc410074.350ENSTSYG00000006532PABPC48973.484Carlito_syrichta
ENSPMAG00000002836pabpc49973.785ENSCAPG00000015984PABPC48973.730Cavia_aperea
ENSPMAG00000002836pabpc410073.540ENSCPOG00000009552PABPC48973.484Cavia_porcellus
ENSPMAG00000002836pabpc410073.368ENSCCAG00000037306PABPC48973.657Cebus_capucinus
ENSPMAG00000002836pabpc410073.196ENSCATG00000042164PABPC48973.484Cercocebus_atys
ENSPMAG00000002836pabpc410073.368ENSCLAG00000011899PABPC48973.310Chinchilla_lanigera
ENSPMAG00000002836pabpc410070.297ENSCSAG00000001135PABPC48970.132Chlorocebus_sabaeus
ENSPMAG00000002836pabpc47979.016ENSCHOG00000005327PABPC46782.759Choloepus_hoffmanni
ENSPMAG00000002836pabpc410076.776ENSCPBG00000001038PABPC48975.563Chrysemys_picta_bellii
ENSPMAG00000002836pabpc49973.473ENSCANG00000034177PABPC48973.768Colobus_angolensis_palliatus
ENSPMAG00000002836pabpc410074.476ENSCGRG00001018166Pabpc48873.601Cricetulus_griseus_chok1gshd
ENSPMAG00000002836pabpc49974.778ENSCGRG00000009777Pabpc48873.890Cricetulus_griseus_crigri
ENSPMAG00000002836pabpc410075.958ENSCSEG00000000130pabpc48875.087Cynoglossus_semilaevis
ENSPMAG00000002836pabpc49976.283ENSCVAG00000019246pabpc48875.575Cyprinodon_variegatus
ENSPMAG00000002836pabpc49976.842ENSDARG00000059259pabpc49275.965Danio_rerio
ENSPMAG00000002836pabpc49971.344ENSDNOG00000018444-8770.751Dasypus_novemcinctus
ENSPMAG00000002836pabpc410071.864ENSDORG00000011581Pabpc48971.186Dipodomys_ordii
ENSPMAG00000002836pabpc410092.188ENSETEG00000018453-7492.188Echinops_telfairi
ENSPMAG00000002836pabpc48546.012ENSETEG00000009172-8644.990Echinops_telfairi
ENSPMAG00000002836pabpc410072.759ENSEBUG00000000992pabpc49071.575Eptatretus_burgeri
ENSPMAG00000002836pabpc410081.818ENSEBUG00000013782pabpc49281.261Eptatretus_burgeri
ENSPMAG00000002836pabpc410070.462ENSEASG00005014119PABPC48970.132Equus_asinus_asinus
ENSPMAG00000002836pabpc410070.462ENSECAG00000009396PABPC48970.132Equus_caballus
ENSPMAG00000002836pabpc410070.297ENSEEUG00000002962PABPC48969.967Erinaceus_europaeus
ENSPMAG00000002836pabpc49975.218ENSELUG00000003195pabpc48774.346Esox_lucius
ENSPMAG00000002836pabpc410074.177ENSFCAG00000015254-8973.657Felis_catus
ENSPMAG00000002836pabpc410075.217ENSFALG00000000543PABPC48975.043Ficedula_albicollis
ENSPMAG00000002836pabpc410070.297ENSFDAG00000020016-8969.967Fukomys_damarensis
ENSPMAG00000002836pabpc48746.287ENSFDAG00000010581-8743.715Fukomys_damarensis
ENSPMAG00000002836pabpc410076.307ENSFHEG00000007548pabpc48875.436Fundulus_heteroclitus
ENSPMAG00000002836pabpc49975.614ENSGMOG00000019025pabpc48774.737Gadus_morhua
ENSPMAG00000002836pabpc410075.737ENSGALG00000003800PABPC48975.217Gallus_gallus
ENSPMAG00000002836pabpc410075.304ENSGAFG00000018195pabpc49590.710Gambusia_affinis
ENSPMAG00000002836pabpc410076.481ENSGACG00000007179pabpc48875.436Gasterosteus_aculeatus
ENSPMAG00000002836pabpc410077.123ENSGAGG00000001888PABPC48975.910Gopherus_agassizii
ENSPMAG00000002836pabpc410073.196ENSGGOG00000004002PABPC48973.484Gorilla_gorilla
ENSPMAG00000002836pabpc410075.958ENSHBUG00000020206pabpc48875.087Haplochromis_burtoni
ENSPMAG00000002836pabpc410073.368ENSHGLG00000011162PABPC48973.310Heterocephalus_glaber_female
ENSPMAG00000002836pabpc410073.368ENSHGLG00100001580PABPC48973.310Heterocephalus_glaber_male
ENSPMAG00000002836pabpc410074.739ENSHCOG00000012694pabpc48875.087Hippocampus_comes
ENSPMAG00000002836pabpc410075.347ENSIPUG00000016620pabpc48974.826Ictalurus_punctatus
ENSPMAG00000002836pabpc410073.776ENSSTOG00000010416PABPC48873.124Ictidomys_tridecemlineatus
ENSPMAG00000002836pabpc410070.798ENSJJAG00000007781Pabpc48970.289Jaculus_jaculus
ENSPMAG00000002836pabpc410075.610ENSKMAG00000013597pabpc48875.610Kryptolebias_marmoratus
ENSPMAG00000002836pabpc49975.263ENSLBEG00000013654pabpc48774.561Labrus_bergylta
ENSPMAG00000002836pabpc410074.957ENSLACG00000011907PABPC48974.784Latimeria_chalumnae
ENSPMAG00000002836pabpc49976.923ENSLOCG00000001877pabpc48876.224Lepisosteus_oculatus
ENSPMAG00000002836pabpc410073.951ENSLAFG00000000151PABPC48873.473Loxodonta_africana
ENSPMAG00000002836pabpc410073.196ENSMFAG00000041481PABPC48973.484Macaca_fascicularis
ENSPMAG00000002836pabpc410070.297ENSMMUG00000007497PABPC48970.132Macaca_mulatta
ENSPMAG00000002836pabpc410073.196ENSMNEG00000043054PABPC48973.484Macaca_nemestrina
ENSPMAG00000002836pabpc410073.196ENSMLEG00000040716PABPC48973.484Mandrillus_leucophaeus
ENSPMAG00000002836pabpc410075.784ENSMAMG00000010025pabpc49174.869Mastacembelus_armatus
ENSPMAG00000002836pabpc410075.610ENSMZEG00005006141pabpc48874.913Maylandia_zebra
ENSPMAG00000002836pabpc49969.850ENSMGAG00000005408PABPC48869.476Meleagris_gallopavo
ENSPMAG00000002836pabpc48070.142ENSMAUG00000001295-8772.872Mesocricetus_auratus
ENSPMAG00000002836pabpc46477.586ENSMAUG00000004089-9178.488Mesocricetus_auratus
ENSPMAG00000002836pabpc47386.207ENSMAUG00000019763-6786.207Mesocricetus_auratus
ENSPMAG00000002836pabpc410073.427ENSMICG00000016633-10073.043Microcebus_murinus
ENSPMAG00000002836pabpc49964.000ENSMICG00000036729-8662.500Microcebus_murinus
ENSPMAG00000002836pabpc410073.711ENSMOCG00000006763Pabpc48873.830Microtus_ochrogaster
ENSPMAG00000002836pabpc410072.997ENSMMOG00000002363pabpc48873.345Mola_mola
ENSPMAG00000002836pabpc46666.667ENSMODG00000018051-9766.667Monodelphis_domestica
ENSPMAG00000002836pabpc410072.305ENSMODG00000017657-8971.642Monodelphis_domestica
ENSPMAG00000002836pabpc410075.000ENSMALG00000011017pabpc48874.132Monopterus_albus
ENSPMAG00000002836pabpc410070.132MGP_CAROLIEiJ_G0026435-10096.403Mus_caroli
ENSPMAG00000002836pabpc49962.984MGP_CAROLIEiJ_G0024864-8763.281Mus_caroli
ENSPMAG00000002836pabpc410073.601ENSMUSG00000011257Pabpc410093.976Mus_musculus
ENSPMAG00000002836pabpc49971.022MGP_PahariEiJ_G0028765Pabpc410097.122Mus_pahari
ENSPMAG00000002836pabpc49966.244MGP_SPRETEiJ_G0027415Pabpc410096.403Mus_spretus
ENSPMAG00000002836pabpc410070.462ENSMPUG00000014414-8970.297Mustela_putorius_furo
ENSPMAG00000002836pabpc49842.004ENSMPUG00000006836-9241.146Mustela_putorius_furo
ENSPMAG00000002836pabpc410073.427ENSMLUG00000012068PABPC48873.124Myotis_lucifugus
ENSPMAG00000002836pabpc410073.776ENSNGAG00000018292Pabpc48873.298Nannospalax_galili
ENSPMAG00000002836pabpc47284.524ENSNBRG00000010047-7284.524Neolamprologus_brichardi
ENSPMAG00000002836pabpc46789.100ENSNBRG00000009708pabpc49889.100Neolamprologus_brichardi
ENSPMAG00000002836pabpc410073.196ENSNLEG00000011928PABPC48973.484Nomascus_leucogenys
ENSPMAG00000002836pabpc48578.189ENSOPRG00000011984PABPC47677.160Ochotona_princeps
ENSPMAG00000002836pabpc49959.620ENSODEG00000017434-9162.992Octodon_degus
ENSPMAG00000002836pabpc45980.420ENSODEG00000013457-10080.420Octodon_degus
ENSPMAG00000002836pabpc410073.196ENSODEG00000006592-8972.337Octodon_degus
ENSPMAG00000002836pabpc410075.958ENSONIG00000008176pabpc48875.087Oreochromis_niloticus
ENSPMAG00000002836pabpc410076.256ENSOANG00000010001PABPC48975.390Ornithorhynchus_anatinus
ENSPMAG00000002836pabpc410069.967ENSOCUG00000000562PABPC48269.802Oryctolagus_cuniculus
ENSPMAG00000002836pabpc410085.015ENSORLG00000017479pabpc48684.756Oryzias_latipes
ENSPMAG00000002836pabpc410085.015ENSORLG00020018644pabpc48684.756Oryzias_latipes_hni
ENSPMAG00000002836pabpc410085.015ENSORLG00015015042pabpc48684.756Oryzias_latipes_hsok
ENSPMAG00000002836pabpc410075.261ENSOMEG00000014410pabpc48874.390Oryzias_melastigma
ENSPMAG00000002836pabpc410071.669ENSOGAG00000004067PABPC48971.164Otolemur_garnettii
ENSPMAG00000002836pabpc410070.627ENSOARG00000020060PABPC48970.297Ovis_aries
ENSPMAG00000002836pabpc410073.196ENSPPAG00000043625PABPC48973.484Pan_paniscus
ENSPMAG00000002836pabpc410074.177ENSPPRG00000024727PABPC48973.657Panthera_pardus
ENSPMAG00000002836pabpc410074.177ENSPTIG00000005829PABPC48973.657Panthera_tigris_altaica
ENSPMAG00000002836pabpc410073.196ENSPTRG00000000573PABPC48973.484Pan_troglodytes
ENSPMAG00000002836pabpc410073.196ENSPANG00000009484PABPC48973.484Papio_anubis
ENSPMAG00000002836pabpc49975.874ENSPKIG00000025356pabpc49075.175Paramormyrops_kingsleyae
ENSPMAG00000002836pabpc410076.684ENSPSIG00000016892PABPC48975.475Pelodiscus_sinensis
ENSPMAG00000002836pabpc410073.124ENSPMGG00000009073pabpc48873.171Periophthalmus_magnuspinnatus
ENSPMAG00000002836pabpc410073.711ENSPEMG00000023569-8973.830Peromyscus_maniculatus_bairdii
ENSPMAG00000002836pabpc49970.478ENSPEMG00000024193-8872.134Peromyscus_maniculatus_bairdii
ENSPMAG00000002836pabpc48986.667ENSPCIG00000020674PABPC48586.667Phascolarctos_cinereus
ENSPMAG00000002836pabpc410075.784ENSPFOG00000002682pabpc48874.913Poecilia_formosa
ENSPMAG00000002836pabpc410075.784ENSPLAG00000010112pabpc48874.913Poecilia_latipinna
ENSPMAG00000002836pabpc410075.784ENSPMEG00000019739pabpc48874.913Poecilia_mexicana
ENSPMAG00000002836pabpc410075.784ENSPREG00000001589pabpc48874.913Poecilia_reticulata
ENSPMAG00000002836pabpc410070.297ENSPPYG00000001506PABPC48970.132Pongo_abelii
ENSPMAG00000002836pabpc410066.502ENSPCAG00000003341PABPC48966.172Procavia_capensis
ENSPMAG00000002836pabpc49958.546ENSPCOG00000025882-6778.378Propithecus_coquereli
ENSPMAG00000002836pabpc410073.070ENSPCOG00000023725-8973.356Propithecus_coquereli
ENSPMAG00000002836pabpc49968.392ENSPVAG00000002187PABPC48867.468Pteropus_vampyrus
ENSPMAG00000002836pabpc410075.958ENSPNYG00000006134pabpc48875.087Pundamilia_nyererei
ENSPMAG00000002836pabpc49975.704ENSPNAG00000024355pabpc48774.824Pygocentrus_nattereri
ENSPMAG00000002836pabpc410071.864ENSRNOG00000015642Pabpc48971.186Rattus_norvegicus
ENSPMAG00000002836pabpc410070.169ENSRNOG00000028592AABR07035074.18969.492Rattus_norvegicus
ENSPMAG00000002836pabpc410073.196ENSRBIG00000039761PABPC48973.484Rhinopithecus_bieti
ENSPMAG00000002836pabpc410073.196ENSRROG00000033355PABPC48973.484Rhinopithecus_roxellana
ENSPMAG00000002836pabpc410073.368ENSSBOG00000026193PABPC48973.657Saimiri_boliviensis_boliviensis
ENSPMAG00000002836pabpc410075.563ENSSHAG00000018139PABPC48974.870Sarcophilus_harrisii
ENSPMAG00000002836pabpc49975.588ENSSFOG00015023514pabpc48874.684Scleropages_formosus
ENSPMAG00000002836pabpc410075.958ENSSMAG00000009007pabpc48875.261Scophthalmus_maximus
ENSPMAG00000002836pabpc410075.610ENSSDUG00000012683pabpc48874.913Seriola_dumerili
ENSPMAG00000002836pabpc410075.610ENSSLDG00000013025pabpc48874.913Seriola_lalandi_dorsalis
ENSPMAG00000002836pabpc410063.366ENSSARG00000000310PABPC48963.036Sorex_araneus
ENSPMAG00000002836pabpc410075.524ENSSPUG00000003204PABPC48975.044Sphenodon_punctatus
ENSPMAG00000002836pabpc410075.610ENSSPAG00000009252pabpc48684.459Stegastes_partitus
ENSPMAG00000002836pabpc48836.957ENSSSCG00000036170-8436.759Sus_scrofa
ENSPMAG00000002836pabpc410074.003ENSSSCG00000003660-8973.484Sus_scrofa
ENSPMAG00000002836pabpc410072.039ENSTGUG00000001266PABPC48971.382Taeniopygia_guttata
ENSPMAG00000002836pabpc410076.307ENSTRUG00000005907pabpc48875.087Takifugu_rubripes
ENSPMAG00000002836pabpc410072.426ENSTNIG00000016902pabpc48871.902Tetraodon_nigroviridis
ENSPMAG00000002836pabpc49957.856ENSTBEG00000009035PABPC48857.671Tupaia_belangeri
ENSPMAG00000002836pabpc49996.040ENSTTRG00000014340PABPC48757.671Tursiops_truncatus
ENSPMAG00000002836pabpc410074.003ENSUAMG00000000303PABPC48973.657Ursus_americanus
ENSPMAG00000002836pabpc48986.207ENSUMAG00000019585PABPC48686.207Ursus_maritimus
ENSPMAG00000002836pabpc48164.620ENSVPAG00000010041PABPC47364.620Vicugna_pacos
ENSPMAG00000002836pabpc410074.177ENSVVUG00000005215PABPC48973.657Vulpes_vulpes
ENSPMAG00000002836pabpc410072.444ENSXETG00000010946pabpc48972.097Xenopus_tropicalis
ENSPMAG00000002836pabpc46894.578ENSXETG00000027221-10094.578Xenopus_tropicalis
ENSPMAG00000002836pabpc49972.888ENSXCOG00000013190pabpc49683.256Xiphophorus_couchianus
ENSPMAG00000002836pabpc410075.784ENSXMAG00000019007pabpc48874.913Xiphophorus_maculatus

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