EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002887 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 18631 bases
Position: chrGL478370:26406-45036
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003176	Exo_endo_phos	PF03372.23	2.5e-16	1	1
ENSPMAP00000003176	DUF1866	PF08952.11	3.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003191	-	3978	-	ENSPMAP00000003176	1326 (aa)	-	S4RD94

Gene Model

Click here to download ENSPMAG00000002887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002887	synj1	96	53.569	ENSG00000159082	SYNJ1	100	64.366	Homo_sapiens
ENSPMAG00000002887	synj1	74	60.865	ENSAPOG00000002809	synj1	76	59.056	Acanthochromis_polyacanthus
ENSPMAG00000002887	synj1	96	53.085	ENSAMEG00000015028	SYNJ1	81	53.429	Ailuropoda_melanoleuca
ENSPMAG00000002887	synj1	74	58.665	ENSACIG00000008857	synj1	77	57.115	Amphilophus_citrinellus
ENSPMAG00000002887	synj1	74	61.066	ENSAOCG00000009835	synj1	97	50.642	Amphiprion_ocellaris
ENSPMAG00000002887	synj1	74	60.643	ENSAPEG00000021010	synj1	62	58.846	Amphiprion_percula
ENSPMAG00000002887	synj1	74	59.660	ENSATEG00000002306	synj1	62	58.142	Anabas_testudineus
ENSPMAG00000002887	synj1	81	59.710	ENSAPLG00000011832	SYNJ1	65	61.937	Anas_platyrhynchos
ENSPMAG00000002887	synj1	96	52.937	ENSANAG00000027325	SYNJ1	79	61.116	Aotus_nancymaae
ENSPMAG00000002887	synj1	74	60.341	ENSACLG00000002255	synj1	99	51.709	Astatotilapia_calliptera
ENSPMAG00000002887	synj1	80	58.736	ENSAMXG00000008208	synj1	63	59.540	Astyanax_mexicanus
ENSPMAG00000002887	synj1	95	53.533	ENSBTAG00000003063	SYNJ1	78	60.385	Bos_taurus
ENSPMAG00000002887	synj1	96	52.715	ENSCJAG00000009187	SYNJ1	79	60.924	Callithrix_jacchus
ENSPMAG00000002887	synj1	96	53.385	ENSCAFG00000009041	SYNJ1	81	59.654	Canis_familiaris
ENSPMAG00000002887	synj1	96	53.852	ENSCAFG00020025776	SYNJ1	67	60.327	Canis_lupus_dingo
ENSPMAG00000002887	synj1	80	59.888	ENSCHIG00000005095	SYNJ1	68	60.656	Capra_hircus
ENSPMAG00000002887	synj1	96	53.267	ENSTSYG00000014541	SYNJ1	79	61.116	Carlito_syrichta
ENSPMAG00000002887	synj1	77	52.524	ENSCAPG00000014483	SYNJ1	69	54.697	Cavia_aperea
ENSPMAG00000002887	synj1	96	53.787	ENSCPOG00000012182	SYNJ1	78	61.234	Cavia_porcellus
ENSPMAG00000002887	synj1	80	59.103	ENSCCAG00000020825	SYNJ1	79	61.020	Cebus_capucinus
ENSPMAG00000002887	synj1	80	59.195	ENSCATG00000033891	SYNJ1	81	60.807	Cercocebus_atys
ENSPMAG00000002887	synj1	97	53.030	ENSCLAG00000009796	SYNJ1	100	64.124	Chinchilla_lanigera
ENSPMAG00000002887	synj1	96	52.888	ENSCSAG00000009654	SYNJ1	78	61.020	Chlorocebus_sabaeus
ENSPMAG00000002887	synj1	63	60.984	ENSCHOG00000012390	SYNJ1	54	60.984	Choloepus_hoffmanni
ENSPMAG00000002887	synj1	80	60.781	ENSCPBG00000006402	SYNJ1	82	61.583	Chrysemys_picta_bellii
ENSPMAG00000002887	synj1	96	53.040	ENSCANG00000031359	SYNJ1	79	61.116	Colobus_angolensis_palliatus
ENSPMAG00000002887	synj1	96	53.359	ENSCGRG00001010861	Synj1	78	61.213	Cricetulus_griseus_chok1gshd
ENSPMAG00000002887	synj1	96	53.359	ENSCGRG00000015749	Synj1	100	64.266	Cricetulus_griseus_crigri
ENSPMAG00000002887	synj1	80	58.714	ENSCSEG00000019614	synj1	80	59.614	Cynoglossus_semilaevis
ENSPMAG00000002887	synj1	80	59.294	ENSDARG00000025011	synj1	78	59.904	Danio_rerio
ENSPMAG00000002887	synj1	96	51.522	ENSDNOG00000010732	SYNJ1	65	59.156	Dasypus_novemcinctus
ENSPMAG00000002887	synj1	53	63.983	ENSDORG00000014735	-	100	63.983	Dipodomys_ordii
ENSPMAG00000002887	synj1	59	67.384	ENSETEG00000018674	SYNJ1	54	67.384	Echinops_telfairi
ENSPMAG00000002887	synj1	81	59.033	ENSEASG00005006287	SYNJ1	98	61.885	Equus_asinus_asinus
ENSPMAG00000002887	synj1	81	58.963	ENSECAG00000004829	SYNJ1	81	60.731	Equus_caballus
ENSPMAG00000002887	synj1	87	57.301	ENSEEUG00000005150	SYNJ1	61	62.143	Erinaceus_europaeus
ENSPMAG00000002887	synj1	71	61.602	ENSELUG00000009731	synj1	74	61.297	Esox_lucius
ENSPMAG00000002887	synj1	96	52.977	ENSFCAG00000012498	SYNJ1	79	60.849	Felis_catus
ENSPMAG00000002887	synj1	52	57.654	ENSFALG00000004680	SYNJ1	56	57.654	Ficedula_albicollis
ENSPMAG00000002887	synj1	96	53.092	ENSFDAG00000016818	SYNJ1	100	64.266	Fukomys_damarensis
ENSPMAG00000002887	synj1	80	58.534	ENSFHEG00000017689	synj1	79	51.238	Fundulus_heteroclitus
ENSPMAG00000002887	synj1	76	56.102	ENSGMOG00000014852	synj1	77	55.458	Gadus_morhua
ENSPMAG00000002887	synj1	78	61.116	ENSGALG00000034317	SYNJ1	66	61.116	Gallus_gallus
ENSPMAG00000002887	synj1	80	57.528	ENSGAFG00000019466	synj1	64	57.930	Gambusia_affinis
ENSPMAG00000002887	synj1	78	61.900	ENSGAGG00000022523	SYNJ1	77	61.900	Gopherus_agassizii
ENSPMAG00000002887	synj1	80	59.286	ENSGGOG00000015945	SYNJ1	81	60.903	Gorilla_gorilla
ENSPMAG00000002887	synj1	74	60.765	ENSHBUG00000007774	synj1	99	51.673	Haplochromis_burtoni
ENSPMAG00000002887	synj1	96	53.185	ENSHGLG00000006420	SYNJ1	100	63.701	Heterocephalus_glaber_female
ENSPMAG00000002887	synj1	96	53.185	ENSHGLG00100012591	SYNJ1	100	63.701	Heterocephalus_glaber_male
ENSPMAG00000002887	synj1	95	60.861	ENSHCOG00000012774	synj1	81	56.184	Hippocampus_comes
ENSPMAG00000002887	synj1	78	60.231	ENSIPUG00000010691	SYNJ1	83	52.402	Ictalurus_punctatus
ENSPMAG00000002887	synj1	96	53.211	ENSSTOG00000015806	SYNJ1	78	61.234	Ictidomys_tridecemlineatus
ENSPMAG00000002887	synj1	96	50.531	ENSJJAG00000020168	Synj1	64	57.774	Jaculus_jaculus
ENSPMAG00000002887	synj1	74	59.538	ENSKMAG00000004221	synj1	87	57.910	Kryptolebias_marmoratus
ENSPMAG00000002887	synj1	74	59.799	ENSLBEG00000015081	synj1	78	57.880	Labrus_bergylta
ENSPMAG00000002887	synj1	80	60.316	ENSLACG00000005928	SYNJ1	66	60.728	Latimeria_chalumnae
ENSPMAG00000002887	synj1	80	59.590	ENSLOCG00000009230	synj1	69	60.115	Lepisosteus_oculatus
ENSPMAG00000002887	synj1	78	61.041	ENSLAFG00000011806	SYNJ1	65	61.041	Loxodonta_africana
ENSPMAG00000002887	synj1	78	58.608	ENSMFAG00000018883	SYNJ1	78	60.555	Macaca_fascicularis
ENSPMAG00000002887	synj1	78	61.116	ENSMMUG00000004624	SYNJ1	78	60.940	Macaca_mulatta
ENSPMAG00000002887	synj1	80	59.195	ENSMNEG00000040077	SYNJ1	74	61.116	Macaca_nemestrina
ENSPMAG00000002887	synj1	80	59.103	ENSMLEG00000037029	SYNJ1	79	61.020	Mandrillus_leucophaeus
ENSPMAG00000002887	synj1	74	60.782	ENSMAMG00000013404	synj1	62	59.441	Mastacembelus_armatus
ENSPMAG00000002887	synj1	74	60.582	ENSMZEG00005024358	synj1	78	58.886	Maylandia_zebra
ENSPMAG00000002887	synj1	80	58.106	ENSMGAG00000014522	SYNJ1	68	58.241	Meleagris_gallopavo
ENSPMAG00000002887	synj1	96	52.892	ENSMAUG00000009743	Synj1	100	63.701	Mesocricetus_auratus
ENSPMAG00000002887	synj1	96	53.159	ENSMICG00000034953	SYNJ1	79	60.924	Microcebus_murinus
ENSPMAG00000002887	synj1	79	57.732	ENSMMOG00000010203	synj1	81	58.349	Mola_mola
ENSPMAG00000002887	synj1	78	58.614	ENSMODG00000021073	SYNJ1	78	58.614	Monodelphis_domestica
ENSPMAG00000002887	synj1	77	58.767	ENSMALG00000014015	synj1	62	58.863	Monopterus_albus
ENSPMAG00000002887	synj1	96	53.318	MGP_CAROLIEiJ_G0020951	Synj1	100	64.124	Mus_caroli
ENSPMAG00000002887	synj1	96	53.323	ENSMUSG00000022973	Synj1	100	64.266	Mus_musculus
ENSPMAG00000002887	synj1	96	53.170	MGP_PahariEiJ_G0016656	Synj1	100	64.124	Mus_pahari
ENSPMAG00000002887	synj1	96	53.237	MGP_SPRETEiJ_G0021857	Synj1	100	64.266	Mus_spretus
ENSPMAG00000002887	synj1	96	53.052	ENSMPUG00000001153	SYNJ1	83	53.328	Mustela_putorius_furo
ENSPMAG00000002887	synj1	51	65.007	ENSMLUG00000026584	-	100	65.007	Myotis_lucifugus
ENSPMAG00000002887	synj1	98	52.751	ENSNGAG00000000453	Synj1	100	63.559	Nannospalax_galili
ENSPMAG00000002887	synj1	74	57.186	ENSNBRG00000011936	synj1	76	54.460	Neolamprologus_brichardi
ENSPMAG00000002887	synj1	82	52.764	ENSNLEG00000003734	SYNJ1	86	61.837	Nomascus_leucogenys
ENSPMAG00000002887	synj1	71	52.190	ENSMEUG00000004158	-	60	52.190	Notamacropus_eugenii
ENSPMAG00000002887	synj1	90	62.636	ENSOPRG00000013602	SYNJ1	59	62.636	Ochotona_princeps
ENSPMAG00000002887	synj1	53	64.124	ENSODEG00000002409	-	100	64.124	Octodon_degus
ENSPMAG00000002887	synj1	74	60.481	ENSONIG00000004667	synj1	72	59.317	Oreochromis_niloticus
ENSPMAG00000002887	synj1	75	59.526	ENSOANG00000006929	SYNJ1	65	59.526	Ornithorhynchus_anatinus
ENSPMAG00000002887	synj1	79	60.248	ENSOCUG00000001420	SYNJ1	67	60.248	Oryctolagus_cuniculus
ENSPMAG00000002887	synj1	77	59.284	ENSORLG00000004320	synj1	77	59.324	Oryzias_latipes
ENSPMAG00000002887	synj1	77	57.529	ENSORLG00020011994	synj1	77	57.570	Oryzias_latipes_hni
ENSPMAG00000002887	synj1	76	59.415	ENSORLG00015018077	synj1	61	59.152	Oryzias_latipes_hsok
ENSPMAG00000002887	synj1	80	57.978	ENSOGAG00000006010	SYNJ1	63	58.694	Otolemur_garnettii
ENSPMAG00000002887	synj1	96	52.870	ENSOARG00000013414	SYNJ1	64	60.345	Ovis_aries
ENSPMAG00000002887	synj1	96	53.492	ENSPPAG00000026784	SYNJ1	79	61.213	Pan_paniscus
ENSPMAG00000002887	synj1	96	53.196	ENSPPRG00000023469	SYNJ1	99	53.444	Panthera_pardus
ENSPMAG00000002887	synj1	96	53.272	ENSPTIG00000007930	SYNJ1	99	53.520	Panthera_tigris_altaica
ENSPMAG00000002887	synj1	96	53.492	ENSPTRG00000023787	SYNJ1	81	60.903	Pan_troglodytes
ENSPMAG00000002887	synj1	80	59.012	ENSPTRG00000048135	-	81	60.903	Pan_troglodytes
ENSPMAG00000002887	synj1	80	59.195	ENSPANG00000022531	SYNJ1	79	61.116	Papio_anubis
ENSPMAG00000002887	synj1	78	59.942	ENSPKIG00000022603	synj1	84	60.038	Paramormyrops_kingsleyae
ENSPMAG00000002887	synj1	80	57.856	ENSPMGG00000016831	synj1	74	57.559	Periophthalmus_magnuspinnatus
ENSPMAG00000002887	synj1	96	53.328	ENSPEMG00000018767	Synj1	100	63.983	Peromyscus_maniculatus_bairdii
ENSPMAG00000002887	synj1	85	56.388	ENSPFOG00000016886	synj1	99	51.652	Poecilia_formosa
ENSPMAG00000002887	synj1	85	54.828	ENSPLAG00000017559	synj1	78	57.397	Poecilia_latipinna
ENSPMAG00000002887	synj1	98	50.147	ENSPMEG00000007643	synj1	80	50.593	Poecilia_mexicana
ENSPMAG00000002887	synj1	85	56.300	ENSPREG00000012412	synj1	99	51.422	Poecilia_reticulata
ENSPMAG00000002887	synj1	88	56.235	ENSPCOG00000024841	SYNJ1	84	59.203	Propithecus_coquereli
ENSPMAG00000002887	synj1	78	56.400	ENSPVAG00000000892	SYNJ1	65	56.400	Pteropus_vampyrus
ENSPMAG00000002887	synj1	74	59.397	ENSPNYG00000022989	synj1	78	57.582	Pundamilia_nyererei
ENSPMAG00000002887	synj1	80	59.404	ENSPNAG00000021119	synj1	85	59.923	Pygocentrus_nattereri
ENSPMAG00000002887	synj1	96	53.435	ENSRNOG00000002051	Synj1	79	61.427	Rattus_norvegicus
ENSPMAG00000002887	synj1	96	53.206	ENSRBIG00000034477	SYNJ1	79	61.213	Rhinopithecus_bieti
ENSPMAG00000002887	synj1	96	53.130	ENSRROG00000039256	SYNJ1	79	61.116	Rhinopithecus_roxellana
ENSPMAG00000002887	synj1	96	52.973	ENSSBOG00000021001	SYNJ1	79	61.154	Saimiri_boliviensis_boliviensis
ENSPMAG00000002887	synj1	78	60.038	ENSSHAG00000008538	SYNJ1	65	60.038	Sarcophilus_harrisii
ENSPMAG00000002887	synj1	80	58.086	ENSSMAG00000018066	synj1	78	57.129	Scophthalmus_maximus
ENSPMAG00000002887	synj1	80	59.012	ENSSPUG00000012552	SYNJ1	66	61.020	Sphenodon_punctatus
ENSPMAG00000002887	synj1	75	58.042	ENSSPAG00000006812	SYNJ1	60	58.635	Stegastes_partitus
ENSPMAG00000002887	synj1	85	54.677	ENSSPAG00000017029	synj1	65	58.637	Stegastes_partitus
ENSPMAG00000002887	synj1	96	52.812	ENSSSCG00000012035	SYNJ1	79	60.828	Sus_scrofa
ENSPMAG00000002887	synj1	78	61.340	ENSTGUG00000013445	SYNJ1	65	61.340	Taeniopygia_guttata
ENSPMAG00000002887	synj1	74	60.664	ENSTRUG00000006907	synj1	79	58.852	Takifugu_rubripes
ENSPMAG00000002887	synj1	80	55.423	ENSTNIG00000009940	synj1	78	55.461	Tetraodon_nigroviridis
ENSPMAG00000002887	synj1	72	63.240	ENSTBEG00000016298	SYNJ1	60	63.240	Tupaia_belangeri
ENSPMAG00000002887	synj1	78	54.283	ENSTTRG00000002222	SYNJ1	66	54.283	Tursiops_truncatus
ENSPMAG00000002887	synj1	81	59.016	ENSUAMG00000018606	SYNJ1	99	62.978	Ursus_americanus
ENSPMAG00000002887	synj1	84	56.844	ENSUMAG00000018419	SYNJ1	99	63.021	Ursus_maritimus
ENSPMAG00000002887	synj1	69	63.158	ENSVPAG00000001241	SYNJ1	65	63.158	Vicugna_pacos
ENSPMAG00000002887	synj1	96	53.574	ENSVVUG00000023125	SYNJ1	78	60.731	Vulpes_vulpes
ENSPMAG00000002887	synj1	74	61.039	ENSXETG00000009899	synj1	65	59.429	Xenopus_tropicalis
ENSPMAG00000002887	synj1	80	58.163	ENSXCOG00000011896	synj1	79	58.869	Xiphophorus_couchianus
ENSPMAG00000002887	synj1	80	56.779	ENSXMAG00000017524	synj1	78	59.095	Xiphophorus_maculatus