EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002905 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: -
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 4910 bases
Position: chrGL484291:7639-12548
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003170	Sua5_yciO_yrdC	PF01300.18	3.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003185	-	555	-	ENSPMAP00000003170	185 (aa)	-	S4RD88

Gene Model

Click here to download ENSPMAG00000002905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002905	yrdc	96	56.742	ENSG00000196449	YRDC	63	56.742	Homo_sapiens
ENSPMAG00000002905	yrdc	96	57.627	ENSAPOG00000024293	yrdc	66	57.627	Acanthochromis_polyacanthus
ENSPMAG00000002905	yrdc	91	56.548	ENSAMEG00000001173	YRDC	89	56.548	Ailuropoda_melanoleuca
ENSPMAG00000002905	yrdc	95	59.429	ENSACIG00000017330	yrdc	64	59.429	Amphilophus_citrinellus
ENSPMAG00000002905	yrdc	96	58.192	ENSAOCG00000021647	yrdc	66	58.192	Amphiprion_ocellaris
ENSPMAG00000002905	yrdc	96	58.192	ENSAPEG00000006164	yrdc	66	58.192	Amphiprion_percula
ENSPMAG00000002905	yrdc	96	59.322	ENSATEG00000010086	yrdc	65	59.322	Anabas_testudineus
ENSPMAG00000002905	yrdc	96	58.427	ENSACAG00000017203	YRDC	87	57.297	Anolis_carolinensis
ENSPMAG00000002905	yrdc	96	55.618	ENSANAG00000028788	-	75	55.618	Aotus_nancymaae
ENSPMAG00000002905	yrdc	96	52.222	ENSANAG00000031052	-	65	52.222	Aotus_nancymaae
ENSPMAG00000002905	yrdc	96	58.192	ENSACLG00000027775	yrdc	64	58.192	Astatotilapia_calliptera
ENSPMAG00000002905	yrdc	96	57.627	ENSAMXG00000037791	yrdc	71	57.627	Astyanax_mexicanus
ENSPMAG00000002905	yrdc	96	56.742	ENSBTAG00000006510	YRDC	64	56.742	Bos_taurus
ENSPMAG00000002905	yrdc	96	38.333	WBGene00012997	Y48C3A.18	82	42.400	Caenorhabditis_elegans
ENSPMAG00000002905	yrdc	96	56.180	ENSCAFG00000003253	YRDC	65	56.180	Canis_familiaris
ENSPMAG00000002905	yrdc	96	57.865	ENSCAFG00020007843	YRDC	65	57.865	Canis_lupus_dingo
ENSPMAG00000002905	yrdc	96	56.180	ENSCHIG00000007882	YRDC	64	56.180	Capra_hircus
ENSPMAG00000002905	yrdc	84	59.355	ENSTSYG00000005555	YRDC	55	59.355	Carlito_syrichta
ENSPMAG00000002905	yrdc	96	57.303	ENSCPOG00000036144	YRDC	63	57.303	Cavia_porcellus
ENSPMAG00000002905	yrdc	96	56.180	ENSCCAG00000028891	YRDC	63	56.180	Cebus_capucinus
ENSPMAG00000002905	yrdc	96	56.742	ENSCATG00000036928	YRDC	63	56.742	Cercocebus_atys
ENSPMAG00000002905	yrdc	96	54.237	ENSCLAG00000015012	YRDC	63	54.494	Chinchilla_lanigera
ENSPMAG00000002905	yrdc	96	56.742	ENSCSAG00000001116	YRDC	63	56.742	Chlorocebus_sabaeus
ENSPMAG00000002905	yrdc	71	55.725	ENSCHOG00000005500	YRDC	62	55.725	Choloepus_hoffmanni
ENSPMAG00000002905	yrdc	96	53.672	ENSCPBG00000018446	YRDC	75	53.672	Chrysemys_picta_bellii
ENSPMAG00000002905	yrdc	96	45.161	ENSCING00000007564	-	85	45.161	Ciona_intestinalis
ENSPMAG00000002905	yrdc	96	47.283	ENSCSAVG00000009982	-	85	47.283	Ciona_savignyi
ENSPMAG00000002905	yrdc	96	56.742	ENSCANG00000031111	YRDC	63	56.742	Colobus_angolensis_palliatus
ENSPMAG00000002905	yrdc	96	57.303	ENSCGRG00001014496	-	63	57.303	Cricetulus_griseus_chok1gshd
ENSPMAG00000002905	yrdc	56	55.769	ENSCGRG00000001307	-	81	55.769	Cricetulus_griseus_crigri
ENSPMAG00000002905	yrdc	96	56.497	ENSCSEG00000019075	yrdc	63	56.497	Cynoglossus_semilaevis
ENSPMAG00000002905	yrdc	96	55.932	ENSCVAG00000017355	yrdc	65	55.932	Cyprinodon_variegatus
ENSPMAG00000002905	yrdc	96	56.742	ENSDARG00000041428	yrdc	74	56.742	Danio_rerio
ENSPMAG00000002905	yrdc	96	39.326	ENSDNOG00000036198	-	86	39.326	Dasypus_novemcinctus
ENSPMAG00000002905	yrdc	96	57.303	ENSDNOG00000038789	-	69	57.303	Dasypus_novemcinctus
ENSPMAG00000002905	yrdc	99	55.435	ENSDORG00000008788	Yrdc	81	55.435	Dipodomys_ordii
ENSPMAG00000002905	yrdc	96	49.444	FBgn0061361	CG33786	71	49.444	Drosophila_melanogaster
ENSPMAG00000002905	yrdc	96	45.506	ENSETEG00000003442	YRDC	63	45.506	Echinops_telfairi
ENSPMAG00000002905	yrdc	96	54.237	ENSEBUG00000014080	yrdc	72	54.237	Eptatretus_burgeri
ENSPMAG00000002905	yrdc	96	57.303	ENSEASG00005012253	YRDC	63	57.303	Equus_asinus_asinus
ENSPMAG00000002905	yrdc	96	57.303	ENSECAG00000022522	YRDC	63	57.303	Equus_caballus
ENSPMAG00000002905	yrdc	96	59.887	ENSELUG00000018071	yrdc	57	59.887	Esox_lucius
ENSPMAG00000002905	yrdc	96	56.180	ENSFCAG00000011018	YRDC	63	56.180	Felis_catus
ENSPMAG00000002905	yrdc	94	56.897	ENSFALG00000000964	YRDC	82	55.801	Ficedula_albicollis
ENSPMAG00000002905	yrdc	56	55.769	ENSFDAG00000016507	-	98	55.769	Fukomys_damarensis
ENSPMAG00000002905	yrdc	95	59.429	ENSFHEG00000001029	yrdc	69	59.429	Fundulus_heteroclitus
ENSPMAG00000002905	yrdc	96	57.627	ENSGMOG00000015635	yrdc	83	57.627	Gadus_morhua
ENSPMAG00000002905	yrdc	96	57.627	ENSGALG00000029001	YRDC	69	57.627	Gallus_gallus
ENSPMAG00000002905	yrdc	96	54.802	ENSGAFG00000008396	yrdc	64	54.802	Gambusia_affinis
ENSPMAG00000002905	yrdc	99	56.216	ENSGACG00000013878	yrdc	75	56.216	Gasterosteus_aculeatus
ENSPMAG00000002905	yrdc	96	58.192	ENSGAGG00000014968	YRDC	76	58.192	Gopherus_agassizii
ENSPMAG00000002905	yrdc	96	56.742	ENSGGOG00000007619	YRDC	63	56.742	Gorilla_gorilla
ENSPMAG00000002905	yrdc	96	58.192	ENSHBUG00000009298	yrdc	64	58.192	Haplochromis_burtoni
ENSPMAG00000002905	yrdc	96	56.742	ENSHGLG00000014075	YRDC	63	56.742	Heterocephalus_glaber_female
ENSPMAG00000002905	yrdc	96	56.742	ENSHGLG00100002734	YRDC	64	56.742	Heterocephalus_glaber_male
ENSPMAG00000002905	yrdc	96	57.627	ENSHCOG00000006598	yrdc	69	57.627	Hippocampus_comes
ENSPMAG00000002905	yrdc	96	58.757	ENSIPUG00000014985	yrdc	71	58.757	Ictalurus_punctatus
ENSPMAG00000002905	yrdc	96	56.742	ENSSTOG00000001643	YRDC	63	56.742	Ictidomys_tridecemlineatus
ENSPMAG00000002905	yrdc	56	55.769	ENSJJAG00000023117	-	98	55.769	Jaculus_jaculus
ENSPMAG00000002905	yrdc	96	57.627	ENSKMAG00000013468	yrdc	64	57.627	Kryptolebias_marmoratus
ENSPMAG00000002905	yrdc	96	58.192	ENSLBEG00000027501	yrdc	64	58.192	Labrus_bergylta
ENSPMAG00000002905	yrdc	99	32.474	ENSLACG00000017624	si:ch211-153b23.3	58	32.474	Latimeria_chalumnae
ENSPMAG00000002905	yrdc	96	56.497	ENSLACG00000010689	YRDC	81	56.497	Latimeria_chalumnae
ENSPMAG00000002905	yrdc	96	58.989	ENSLOCG00000003321	yrdc	73	58.989	Lepisosteus_oculatus
ENSPMAG00000002905	yrdc	96	56.742	ENSLAFG00000017556	YRDC	63	56.742	Loxodonta_africana
ENSPMAG00000002905	yrdc	96	56.742	ENSMFAG00000003487	YRDC	83	56.742	Macaca_fascicularis
ENSPMAG00000002905	yrdc	96	56.742	ENSMNEG00000029348	YRDC	63	56.742	Macaca_nemestrina
ENSPMAG00000002905	yrdc	69	56.250	ENSMLEG00000041122	YRDC	84	56.250	Mandrillus_leucophaeus
ENSPMAG00000002905	yrdc	100	56.383	ENSMAMG00000007315	yrdc	68	56.383	Mastacembelus_armatus
ENSPMAG00000002905	yrdc	96	58.192	ENSMZEG00005006948	yrdc	64	58.192	Maylandia_zebra
ENSPMAG00000002905	yrdc	96	58.192	ENSMGAG00000002833	YRDC	86	58.192	Meleagris_gallopavo
ENSPMAG00000002905	yrdc	56	55.769	ENSMAUG00000003715	-	98	55.769	Mesocricetus_auratus
ENSPMAG00000002905	yrdc	96	57.303	ENSMICG00000031688	YRDC	64	57.303	Microcebus_murinus
ENSPMAG00000002905	yrdc	71	54.962	ENSMOCG00000000164	-	51	54.962	Microtus_ochrogaster
ENSPMAG00000002905	yrdc	96	57.062	ENSMMOG00000002119	yrdc	65	57.062	Mola_mola
ENSPMAG00000002905	yrdc	96	56.180	ENSMODG00000017750	YRDC	63	56.180	Monodelphis_domestica
ENSPMAG00000002905	yrdc	96	57.627	ENSMALG00000012471	yrdc	66	57.627	Monopterus_albus
ENSPMAG00000002905	yrdc	96	57.303	MGP_CAROLIEiJ_G0026453	Yrdc	98	55.769	Mus_caroli
ENSPMAG00000002905	yrdc	96	57.303	ENSMUSG00000028889	Yrdc	98	55.769	Mus_musculus
ENSPMAG00000002905	yrdc	96	56.742	MGP_PahariEiJ_G0028784	Yrdc	98	54.808	Mus_pahari
ENSPMAG00000002905	yrdc	96	57.303	MGP_SPRETEiJ_G0027432	Yrdc	63	57.303	Mus_spretus
ENSPMAG00000002905	yrdc	96	56.742	ENSMPUG00000014542	YRDC	71	56.742	Mustela_putorius_furo
ENSPMAG00000002905	yrdc	100	54.595	ENSMLUG00000024310	-	90	54.595	Myotis_lucifugus
ENSPMAG00000002905	yrdc	95	50.286	ENSMLUG00000028796	-	62	50.286	Myotis_lucifugus
ENSPMAG00000002905	yrdc	96	57.865	ENSMLUG00000000955	-	63	57.865	Myotis_lucifugus
ENSPMAG00000002905	yrdc	96	57.865	ENSNGAG00000019099	Yrdc	63	57.865	Nannospalax_galili
ENSPMAG00000002905	yrdc	96	58.192	ENSNBRG00000009475	yrdc	65	58.192	Neolamprologus_brichardi
ENSPMAG00000002905	yrdc	96	56.742	ENSNLEG00000011665	YRDC	64	56.742	Nomascus_leucogenys
ENSPMAG00000002905	yrdc	96	56.742	ENSMEUG00000005068	YRDC	82	56.742	Notamacropus_eugenii
ENSPMAG00000002905	yrdc	96	56.180	ENSODEG00000007401	YRDC	98	54.808	Octodon_degus
ENSPMAG00000002905	yrdc	98	57.143	ENSONIG00000016213	yrdc	75	57.143	Oreochromis_niloticus
ENSPMAG00000002905	yrdc	96	57.303	ENSOCUG00000005384	YRDC	60	57.303	Oryctolagus_cuniculus
ENSPMAG00000002905	yrdc	96	57.062	ENSORLG00000014393	yrdc	65	57.062	Oryzias_latipes
ENSPMAG00000002905	yrdc	98	56.044	ENSORLG00020019663	yrdc	67	56.044	Oryzias_latipes_hni
ENSPMAG00000002905	yrdc	96	57.062	ENSORLG00015004625	yrdc	65	57.062	Oryzias_latipes_hsok
ENSPMAG00000002905	yrdc	96	57.062	ENSOMEG00000018550	yrdc	66	57.062	Oryzias_melastigma
ENSPMAG00000002905	yrdc	96	57.303	ENSOGAG00000030474	YRDC	64	57.303	Otolemur_garnettii
ENSPMAG00000002905	yrdc	96	56.180	ENSOARG00000019873	YRDC	63	56.180	Ovis_aries
ENSPMAG00000002905	yrdc	68	56.000	ENSPPAG00000039722	-	83	56.000	Pan_paniscus
ENSPMAG00000002905	yrdc	96	56.180	ENSPPRG00000007752	YRDC	63	56.180	Panthera_pardus
ENSPMAG00000002905	yrdc	69	55.906	ENSPTIG00000019821	YRDC	54	55.906	Panthera_tigris_altaica
ENSPMAG00000002905	yrdc	96	56.742	ENSPTRG00000000557	YRDC	63	56.742	Pan_troglodytes
ENSPMAG00000002905	yrdc	96	58.192	ENSPKIG00000004574	yrdc	64	58.192	Paramormyrops_kingsleyae
ENSPMAG00000002905	yrdc	96	56.497	ENSPSIG00000006483	YRDC	62	56.497	Pelodiscus_sinensis
ENSPMAG00000002905	yrdc	98	54.945	ENSPMGG00000004184	yrdc	69	54.945	Periophthalmus_magnuspinnatus
ENSPMAG00000002905	yrdc	86	56.604	ENSPEMG00000016985	Yrdc	69	56.250	Peromyscus_maniculatus_bairdii
ENSPMAG00000002905	yrdc	96	56.742	ENSPCIG00000025731	YRDC	67	56.742	Phascolarctos_cinereus
ENSPMAG00000002905	yrdc	96	55.367	ENSPFOG00000023097	yrdc	64	55.367	Poecilia_formosa
ENSPMAG00000002905	yrdc	96	54.237	ENSPLAG00000020882	yrdc	64	54.237	Poecilia_latipinna
ENSPMAG00000002905	yrdc	96	55.367	ENSPMEG00000013237	yrdc	65	55.367	Poecilia_mexicana
ENSPMAG00000002905	yrdc	96	55.367	ENSPREG00000005285	yrdc	64	55.367	Poecilia_reticulata
ENSPMAG00000002905	yrdc	96	56.742	ENSPPYG00000001523	-	73	56.742	Pongo_abelii
ENSPMAG00000002905	yrdc	96	58.427	ENSPCAG00000016850	YRDC	63	58.427	Procavia_capensis
ENSPMAG00000002905	yrdc	96	56.742	ENSPCOG00000013214	YRDC	63	56.742	Propithecus_coquereli
ENSPMAG00000002905	yrdc	96	56.742	ENSPVAG00000010147	YRDC	63	56.742	Pteropus_vampyrus
ENSPMAG00000002905	yrdc	96	58.192	ENSPNYG00000013956	yrdc	64	58.192	Pundamilia_nyererei
ENSPMAG00000002905	yrdc	96	58.192	ENSPNAG00000015625	yrdc	71	58.192	Pygocentrus_nattereri
ENSPMAG00000002905	yrdc	96	56.742	ENSRNOG00000025424	Yrdc	63	56.742	Rattus_norvegicus
ENSPMAG00000002905	yrdc	96	56.180	ENSRBIG00000032289	YRDC	63	56.180	Rhinopithecus_bieti
ENSPMAG00000002905	yrdc	96	56.180	ENSRROG00000039370	YRDC	60	56.180	Rhinopithecus_roxellana
ENSPMAG00000002905	yrdc	96	56.180	ENSSBOG00000018937	YRDC	75	56.180	Saimiri_boliviensis_boliviensis
ENSPMAG00000002905	yrdc	69	58.268	ENSSHAG00000013957	-	85	58.268	Sarcophilus_harrisii
ENSPMAG00000002905	yrdc	100	56.216	ENSSFOG00015006128	yrdc	79	56.216	Scleropages_formosus
ENSPMAG00000002905	yrdc	99	57.377	ENSSMAG00000005195	yrdc	68	57.377	Scophthalmus_maximus
ENSPMAG00000002905	yrdc	96	57.062	ENSSDUG00000009775	yrdc	65	57.062	Seriola_dumerili
ENSPMAG00000002905	yrdc	69	30.370	ENSSDUG00000006631	-	63	30.000	Seriola_dumerili
ENSPMAG00000002905	yrdc	71	30.496	ENSSDUG00000006736	-	65	30.496	Seriola_dumerili
ENSPMAG00000002905	yrdc	69	30.000	ENSSLDG00000008694	-	63	30.000	Seriola_lalandi_dorsalis
ENSPMAG00000002905	yrdc	96	57.062	ENSSLDG00000003196	yrdc	65	57.062	Seriola_lalandi_dorsalis
ENSPMAG00000002905	yrdc	96	55.367	ENSSPUG00000003946	YRDC	68	55.367	Sphenodon_punctatus
ENSPMAG00000002905	yrdc	99	56.831	ENSSPAG00000012559	yrdc	67	56.831	Stegastes_partitus
ENSPMAG00000002905	yrdc	96	58.427	ENSSSCG00000040425	YRDC	63	58.427	Sus_scrofa
ENSPMAG00000002905	yrdc	69	57.480	ENSTGUG00000001507	YRDC	86	57.480	Taeniopygia_guttata
ENSPMAG00000002905	yrdc	96	55.932	ENSTRUG00000005923	yrdc	64	57.627	Takifugu_rubripes
ENSPMAG00000002905	yrdc	82	58.940	ENSTBEG00000008863	YRDC	96	58.940	Tupaia_belangeri
ENSPMAG00000002905	yrdc	68	56.800	ENSTTRG00000013538	-	84	56.800	Tursiops_truncatus
ENSPMAG00000002905	yrdc	96	56.742	ENSUAMG00000006150	YRDC	87	56.742	Ursus_americanus
ENSPMAG00000002905	yrdc	96	44.382	ENSVPAG00000006642	YRDC	76	44.382	Vicugna_pacos
ENSPMAG00000002905	yrdc	96	55.367	ENSXETG00000014420	yrdc	74	55.367	Xenopus_tropicalis
ENSPMAG00000002905	yrdc	96	54.237	ENSXCOG00000000829	yrdc	72	54.237	Xiphophorus_couchianus
ENSPMAG00000002905	yrdc	96	54.237	ENSXMAG00000014606	yrdc	61	54.237	Xiphophorus_maculatus