EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000002916 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 15122 bases
Position: chrGL477025:431962-447083
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003191	ResIII	PF04851.15	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003206	-	2412	-	ENSPMAP00000003191	804 (aa)	-	S4RDA9

Gene Model

Click here to download ENSPMAG00000002916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000002916	rad54b	56	38.710	ENSPMAG00000001636	rad54l2	90	38.710
ENSPMAG00000002916	rad54b	65	33.507	ENSPMAG00000005064	ercc6l	76	33.275
ENSPMAG00000002916	rad54b	67	32.541	ENSPMAG00000008026	SMARCA5	78	32.541
ENSPMAG00000002916	rad54b	61	31.323	ENSPMAG00000003871	-	89	31.528
ENSPMAG00000002916	rad54b	53	31.320	ENSPMAG00000001030	-	58	31.403
ENSPMAG00000002916	rad54b	69	44.444	ENSPMAG00000007719	rad54l	74	44.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002916	rad54b	91	58.209	ENSG00000265817	FSBP	100	58.209	Homo_sapiens
ENSPMAG00000002916	rad54b	99	58.552	ENSG00000197275	RAD54B	87	58.552	Homo_sapiens
ENSPMAG00000002916	rad54b	99	58.427	ENSAMEG00000005834	-	86	58.177	Ailuropoda_melanoleuca
ENSPMAG00000002916	rad54b	98	58.861	ENSACIG00000013005	rad54b	88	58.987	Amphilophus_citrinellus
ENSPMAG00000002916	rad54b	98	58.742	ENSAOCG00000008523	rad54b	85	58.616	Amphiprion_ocellaris
ENSPMAG00000002916	rad54b	98	57.888	ENSAPEG00000001673	rad54b	88	57.526	Amphiprion_percula
ENSPMAG00000002916	rad54b	98	58.081	ENSATEG00000001527	rad54b	90	58.028	Anabas_testudineus
ENSPMAG00000002916	rad54b	99	60.777	ENSAPLG00000014366	-	86	60.652	Anas_platyrhynchos
ENSPMAG00000002916	rad54b	98	60.177	ENSACAG00000003671	-	98	60.177	Anolis_carolinensis
ENSPMAG00000002916	rad54b	81	58.055	ENSANAG00000019528	-	100	58.055	Aotus_nancymaae
ENSPMAG00000002916	rad54b	98	58.608	ENSACLG00000007826	rad54b	91	58.987	Astatotilapia_calliptera
ENSPMAG00000002916	rad54b	98	59.422	ENSAMXG00000039985	rad54b	95	58.911	Astyanax_mexicanus
ENSPMAG00000002916	rad54b	99	58.012	ENSBTAG00000000632	RAD54B	87	57.640	Bos_taurus
ENSPMAG00000002916	rad54b	89	33.782	WBGene00013792	Y116A8C.13	71	38.919	Caenorhabditis_elegans
ENSPMAG00000002916	rad54b	99	58.479	ENSCJAG00000000080	-	100	57.995	Callithrix_jacchus
ENSPMAG00000002916	rad54b	99	58.801	ENSCAFG00000009179	RAD54B	86	58.552	Canis_familiaris
ENSPMAG00000002916	rad54b	99	58.677	ENSCAFG00020012084	-	86	58.427	Canis_lupus_dingo
ENSPMAG00000002916	rad54b	99	57.587	ENSCHIG00000008230	-	87	57.214	Capra_hircus
ENSPMAG00000002916	rad54b	99	59.250	ENSTSYG00000013234	-	87	59.250	Carlito_syrichta
ENSPMAG00000002916	rad54b	99	58.677	ENSCPOG00000011643	-	87	58.677	Cavia_porcellus
ENSPMAG00000002916	rad54b	99	58.603	ENSCCAG00000011754	-	100	58.130	Cebus_capucinus
ENSPMAG00000002916	rad54b	99	58.302	ENSCATG00000030661	-	100	57.666	Cercocebus_atys
ENSPMAG00000002916	rad54b	99	58.427	ENSCLAG00000010476	-	89	58.427	Chinchilla_lanigera
ENSPMAG00000002916	rad54b	99	58.552	ENSCSAG00000012712	-	87	58.302	Chlorocebus_sabaeus
ENSPMAG00000002916	rad54b	99	59.750	ENSCPBG00000003204	-	84	62.535	Chrysemys_picta_bellii
ENSPMAG00000002916	rad54b	99	58.302	ENSCANG00000017939	-	100	57.666	Colobus_angolensis_palliatus
ENSPMAG00000002916	rad54b	98	57.484	ENSCGRG00001020184	Rad54b	89	57.107	Cricetulus_griseus_chok1gshd
ENSPMAG00000002916	rad54b	98	56.730	ENSCGRG00000016752	Rad54b	88	56.352	Cricetulus_griseus_crigri
ENSPMAG00000002916	rad54b	98	57.468	ENSCSEG00000001601	rad54b	92	57.468	Cynoglossus_semilaevis
ENSPMAG00000002916	rad54b	98	59.799	ENSCVAG00000009200	rad54b	89	59.596	Cyprinodon_variegatus
ENSPMAG00000002916	rad54b	99	58.209	ENSDARG00000092134	rad54b	99	60.122	Danio_rerio
ENSPMAG00000002916	rad54b	98	59.874	ENSDNOG00000015535	-	86	59.748	Dasypus_novemcinctus
ENSPMAG00000002916	rad54b	99	58.375	ENSDORG00000002492	Rad54b	90	58.000	Dipodomys_ordii
ENSPMAG00000002916	rad54b	83	60.773	ENSETEG00000010605	-	85	60.475	Echinops_telfairi
ENSPMAG00000002916	rad54b	99	55.788	ENSEBUG00000009104	rad54b	85	55.665	Eptatretus_burgeri
ENSPMAG00000002916	rad54b	99	58.085	ENSEASG00005004021	-	89	57.836	Equus_asinus_asinus
ENSPMAG00000002916	rad54b	99	57.960	ENSECAG00000021949	-	92	57.711	Equus_caballus
ENSPMAG00000002916	rad54b	82	53.614	ENSEEUG00000008056	-	72	53.614	Erinaceus_europaeus
ENSPMAG00000002916	rad54b	98	58.048	ENSELUG00000009287	rad54b	84	57.795	Esox_lucius
ENSPMAG00000002916	rad54b	99	58.323	ENSFCAG00000015513	-	99	57.687	Felis_catus
ENSPMAG00000002916	rad54b	99	59.524	ENSFALG00000005467	-	86	59.273	Ficedula_albicollis
ENSPMAG00000002916	rad54b	99	58.427	ENSFDAG00000020541	-	87	58.427	Fukomys_damarensis
ENSPMAG00000002916	rad54b	98	57.987	ENSFHEG00000014382	rad54b	86	57.915	Fundulus_heteroclitus
ENSPMAG00000002916	rad54b	98	57.503	ENSGMOG00000014774	rad54b	98	57.503	Gadus_morhua
ENSPMAG00000002916	rad54b	99	60.000	ENSGALG00000043597	RAD54B	86	59.875	Gallus_gallus
ENSPMAG00000002916	rad54b	98	58.534	ENSGAFG00000007901	rad54b	91	58.534	Gambusia_affinis
ENSPMAG00000002916	rad54b	98	58.113	ENSGACG00000009128	rad54b	85	57.987	Gasterosteus_aculeatus
ENSPMAG00000002916	rad54b	99	59.925	ENSGAGG00000018747	-	86	59.675	Gopherus_agassizii
ENSPMAG00000002916	rad54b	98	58.868	ENSGGOG00000023516	-	86	58.868	Gorilla_gorilla
ENSPMAG00000002916	rad54b	98	58.786	ENSHBUG00000016017	rad54b	84	58.861	Haplochromis_burtoni
ENSPMAG00000002916	rad54b	99	57.764	ENSHGLG00000008263	RAD54B	86	57.764	Heterocephalus_glaber_female
ENSPMAG00000002916	rad54b	99	57.090	ENSHGLG00100008108	-	86	57.090	Heterocephalus_glaber_male
ENSPMAG00000002916	rad54b	98	56.549	ENSHCOG00000004764	rad54b	98	54.712	Hippocampus_comes
ENSPMAG00000002916	rad54b	99	58.540	ENSIPUG00000018531	rad54b	84	58.540	Ictalurus_punctatus
ENSPMAG00000002916	rad54b	99	56.824	ENSSTOG00000010791	-	87	56.203	Ictidomys_tridecemlineatus
ENSPMAG00000002916	rad54b	99	57.644	ENSJJAG00000010314	Rad54b	87	57.644	Jaculus_jaculus
ENSPMAG00000002916	rad54b	97	57.761	ENSKMAG00000004744	rad54b	91	57.252	Kryptolebias_marmoratus
ENSPMAG00000002916	rad54b	93	61.141	ENSLACG00000000859	-	100	60.875	Latimeria_chalumnae
ENSPMAG00000002916	rad54b	99	61.111	ENSLOCG00000010100	rad54b	93	61.423	Lepisosteus_oculatus
ENSPMAG00000002916	rad54b	99	56.946	ENSLAFG00000015315	-	98	56.946	Loxodonta_africana
ENSPMAG00000002916	rad54b	99	58.177	ENSMFAG00000031629	-	100	57.531	Macaca_fascicularis
ENSPMAG00000002916	rad54b	99	58.177	ENSMMUG00000005659	-	87	57.928	Macaca_mulatta
ENSPMAG00000002916	rad54b	99	58.052	ENSMNEG00000016408	-	87	57.803	Macaca_nemestrina
ENSPMAG00000002916	rad54b	99	58.302	ENSMLEG00000006946	-	87	58.052	Mandrillus_leucophaeus
ENSPMAG00000002916	rad54b	99	56.559	ENSMAMG00000012269	rad54b	90	56.328	Mastacembelus_armatus
ENSPMAG00000002916	rad54b	98	58.861	ENSMZEG00005005281	rad54b	94	58.786	Maylandia_zebra
ENSPMAG00000002916	rad54b	99	59.750	ENSMGAG00000012024	-	86	59.625	Meleagris_gallopavo
ENSPMAG00000002916	rad54b	98	58.218	ENSMAUG00000013586	Rad54b	89	58.291	Mesocricetus_auratus
ENSPMAG00000002916	rad54b	99	58.677	ENSMICG00000000754	-	91	58.354	Microcebus_murinus
ENSPMAG00000002916	rad54b	98	57.842	ENSMOCG00000020035	Rad54b	88	57.538	Microtus_ochrogaster
ENSPMAG00000002916	rad54b	98	56.927	ENSMMOG00000003394	rad54b	89	56.927	Mola_mola
ENSPMAG00000002916	rad54b	98	58.312	ENSMODG00000007343	-	97	58.008	Monodelphis_domestica
ENSPMAG00000002916	rad54b	81	56.923	ENSMALG00000001520	rad54b	100	56.923	Monopterus_albus
ENSPMAG00000002916	rad54b	98	57.935	MGP_CAROLIEiJ_G0025810	Rad54b	88	57.557	Mus_caroli
ENSPMAG00000002916	rad54b	98	57.305	ENSMUSG00000078773	Rad54b	88	56.927	Mus_musculus
ENSPMAG00000002916	rad54b	98	57.557	MGP_PahariEiJ_G0023933	Rad54b	88	57.179	Mus_pahari
ENSPMAG00000002916	rad54b	98	57.809	MGP_SPRETEiJ_G0026758	Rad54b	88	57.431	Mus_spretus
ENSPMAG00000002916	rad54b	99	58.677	ENSMPUG00000008878	-	97	58.052	Mustela_putorius_furo
ENSPMAG00000002916	rad54b	98	59.245	ENSMLUG00000008953	-	86	59.119	Myotis_lucifugus
ENSPMAG00000002916	rad54b	98	58.406	ENSNGAG00000017537	Rad54b	88	58.032	Nannospalax_galili
ENSPMAG00000002916	rad54b	98	59.039	ENSNBRG00000013394	rad54b	91	59.039	Neolamprologus_brichardi
ENSPMAG00000002916	rad54b	99	58.302	ENSNLEG00000003062	-	99	57.938	Nomascus_leucogenys
ENSPMAG00000002916	rad54b	79	61.499	ENSMEUG00000012426	-	69	61.499	Notamacropus_eugenii
ENSPMAG00000002916	rad54b	99	57.572	ENSODEG00000019564	-	87	57.322	Octodon_degus
ENSPMAG00000002916	rad54b	91	73.913	ENSODEG00000002650	-	97	73.913	Octodon_degus
ENSPMAG00000002916	rad54b	98	58.734	ENSONIG00000006067	rad54b	86	58.660	Oreochromis_niloticus
ENSPMAG00000002916	rad54b	94	58.607	ENSOANG00000011348	-	99	58.498	Ornithorhynchus_anatinus
ENSPMAG00000002916	rad54b	99	59.199	ENSOCUG00000016478	-	86	59.199	Oryctolagus_cuniculus
ENSPMAG00000002916	rad54b	98	58.586	ENSORLG00000008918	rad54b	99	59.231	Oryzias_latipes
ENSPMAG00000002916	rad54b	80	59.077	ENSORLG00020012171	rad54b	99	59.077	Oryzias_latipes_hni
ENSPMAG00000002916	rad54b	97	58.958	ENSORLG00015018536	rad54b	83	58.958	Oryzias_latipes_hsok
ENSPMAG00000002916	rad54b	96	58.687	ENSOMEG00000004345	rad54b	99	58.376	Oryzias_melastigma
ENSPMAG00000002916	rad54b	99	57.357	ENSOGAG00000007854	-	86	57.232	Otolemur_garnettii
ENSPMAG00000002916	rad54b	99	57.797	ENSOARG00000007691	-	98	57.426	Ovis_aries
ENSPMAG00000002916	rad54b	99	57.428	ENSPPAG00000029572	-	87	57.428	Pan_paniscus
ENSPMAG00000002916	rad54b	99	58.323	ENSPPRG00000007571	-	99	57.687	Panthera_pardus
ENSPMAG00000002916	rad54b	91	58.095	ENSPTIG00000012670	-	99	57.823	Panthera_tigris_altaica
ENSPMAG00000002916	rad54b	99	58.552	ENSPTRG00000020427	-	100	58.209	Pan_troglodytes
ENSPMAG00000002916	rad54b	99	58.302	ENSPANG00000019566	-	87	58.052	Papio_anubis
ENSPMAG00000002916	rad54b	98	60.629	ENSPKIG00000014974	rad54b	85	60.629	Paramormyrops_kingsleyae
ENSPMAG00000002916	rad54b	99	59.250	ENSPSIG00000002383	-	96	59.250	Pelodiscus_sinensis
ENSPMAG00000002916	rad54b	98	57.663	ENSPEMG00000012133	Rad54b	88	57.286	Peromyscus_maniculatus_bairdii
ENSPMAG00000002916	rad54b	99	59.051	ENSPCIG00000020151	-	92	58.677	Phascolarctos_cinereus
ENSPMAG00000002916	rad54b	98	58.638	ENSPFOG00000023411	rad54b	84	58.764	Poecilia_formosa
ENSPMAG00000002916	rad54b	98	58.890	ENSPLAG00000010430	rad54b	84	59.016	Poecilia_latipinna
ENSPMAG00000002916	rad54b	98	59.016	ENSPMEG00000016873	rad54b	92	58.154	Poecilia_mexicana
ENSPMAG00000002916	rad54b	98	59.039	ENSPREG00000018443	rad54b	90	59.039	Poecilia_reticulata
ENSPMAG00000002916	rad54b	99	58.677	ENSPPYG00000018750	-	87	58.677	Pongo_abelii
ENSPMAG00000002916	rad54b	99	58.603	ENSPCOG00000026845	-	99	57.645	Propithecus_coquereli
ENSPMAG00000002916	rad54b	94	57.011	ENSPVAG00000000261	-	86	57.011	Pteropus_vampyrus
ENSPMAG00000002916	rad54b	98	58.376	ENSPNYG00000018303	rad54b	95	58.376	Pundamilia_nyererei
ENSPMAG00000002916	rad54b	99	60.399	ENSPNAG00000000295	rad54b	93	59.675	Pygocentrus_nattereri
ENSPMAG00000002916	rad54b	98	57.286	ENSRNOG00000039949	Rad54b	88	57.161	Rattus_norvegicus
ENSPMAG00000002916	rad54b	99	58.302	ENSRBIG00000020419	-	87	58.052	Rhinopithecus_bieti
ENSPMAG00000002916	rad54b	99	58.177	ENSRROG00000039897	-	87	57.928	Rhinopithecus_roxellana
ENSPMAG00000002916	rad54b	89	35.723	YBR073W	RDH54	64	39.324	Saccharomyces_cerevisiae
ENSPMAG00000002916	rad54b	99	58.603	ENSSBOG00000028501	-	87	58.603	Saimiri_boliviensis_boliviensis
ENSPMAG00000002916	rad54b	98	59.548	ENSSHAG00000017038	-	86	59.245	Sarcophilus_harrisii
ENSPMAG00000002916	rad54b	71	64.623	ENSSFOG00015008483	rad54b	89	64.623	Scleropages_formosus
ENSPMAG00000002916	rad54b	98	58.333	ENSSMAG00000018659	rad54b	90	57.975	Scophthalmus_maximus
ENSPMAG00000002916	rad54b	95	59.663	ENSSDUG00000001122	rad54b	80	59.274	Seriola_dumerili
ENSPMAG00000002916	rad54b	98	58.913	ENSSLDG00000013787	rad54b	90	55.063	Seriola_lalandi_dorsalis
ENSPMAG00000002916	rad54b	98	59.292	ENSSPUG00000016497	-	88	59.292	Sphenodon_punctatus
ENSPMAG00000002916	rad54b	98	58.512	ENSSPAG00000012800	rad54b	89	57.881	Stegastes_partitus
ENSPMAG00000002916	rad54b	99	59.029	ENSSSCG00000006101	-	99	58.552	Sus_scrofa
ENSPMAG00000002916	rad54b	99	59.250	ENSTGUG00000011880	-	86	59.125	Taeniopygia_guttata
ENSPMAG00000002916	rad54b	98	59.596	ENSTRUG00000010015	rad54b	83	59.596	Takifugu_rubripes
ENSPMAG00000002916	rad54b	99	54.851	ENSTTRG00000006312	-	87	54.851	Tursiops_truncatus
ENSPMAG00000002916	rad54b	99	58.677	ENSUMAG00000016401	-	86	58.427	Ursus_maritimus
ENSPMAG00000002916	rad54b	99	58.209	ENSVPAG00000003157	-	87	58.085	Vicugna_pacos
ENSPMAG00000002916	rad54b	99	51.673	ENSXETG00000025924	rad54b	98	52.222	Xenopus_tropicalis
ENSPMAG00000002916	rad54b	98	58.786	ENSXMAG00000013141	rad54b	90	58.786	Xiphophorus_maculatus