EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000002982 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 8934 bases
Position: chrGL479045:478-9411
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003259	RRM_1	PF00076.22	8.7e-11	1	1
ENSPMAP00000003259	RRM_3	PF08777.11	7.6e-21	1	1
ENSPMAP00000003259	La	PF05383.17	8.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003274	-	1442	-	ENSPMAP00000003259	423 (aa)	-	S4RDH7

Gene Model

Click here to download ENSPMAG00000002982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000002982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000002982	ssb	100	45.602	ENSG00000138385	SSB	99	51.351	Homo_sapiens
ENSPMAG00000002982	ssb	86	45.430	ENSAPOG00000003448	ssb	83	45.625	Acanthochromis_polyacanthus
ENSPMAG00000002982	ssb	89	46.819	ENSAMEG00000010507	SSB	78	50.000	Ailuropoda_melanoleuca
ENSPMAG00000002982	ssb	90	43.814	ENSACIG00000001738	ssb	85	45.566	Amphilophus_citrinellus
ENSPMAG00000002982	ssb	86	46.237	ENSAOCG00000020398	ssb	83	46.562	Amphiprion_ocellaris
ENSPMAG00000002982	ssb	86	46.505	ENSAPEG00000020395	ssb	83	46.562	Amphiprion_percula
ENSPMAG00000002982	ssb	89	45.455	ENSATEG00000016884	ssb	81	45.538	Anabas_testudineus
ENSPMAG00000002982	ssb	100	45.125	ENSAPLG00000006109	SSB	77	51.220	Anas_platyrhynchos
ENSPMAG00000002982	ssb	100	44.988	ENSACAG00000017008	SSB	98	45.455	Anolis_carolinensis
ENSPMAG00000002982	ssb	100	41.958	ENSANAG00000027195	-	80	48.077	Aotus_nancymaae
ENSPMAG00000002982	ssb	89	44.125	ENSACLG00000010798	ssb	85	45.231	Astatotilapia_calliptera
ENSPMAG00000002982	ssb	83	50.833	ENSAMXG00000012606	ssb	87	50.000	Astyanax_mexicanus
ENSPMAG00000002982	ssb	89	47.792	ENSBTAG00000008716	SSB	81	49.394	Bos_taurus
ENSPMAG00000002982	ssb	72	33.651	WBGene00016653	C44E4.4	78	35.873	Caenorhabditis_elegans
ENSPMAG00000002982	ssb	87	48.413	ENSCJAG00000045073	SSB	92	50.000	Callithrix_jacchus
ENSPMAG00000002982	ssb	89	49.091	ENSCAFG00000012418	SSB	81	50.606	Canis_familiaris
ENSPMAG00000002982	ssb	89	49.091	ENSCAFG00020002900	SSB	81	50.606	Canis_lupus_dingo
ENSPMAG00000002982	ssb	100	45.476	ENSCHIG00000022624	-	81	49.394	Capra_hircus
ENSPMAG00000002982	ssb	100	41.026	ENSCHIG00000022196	-	83	46.970	Capra_hircus
ENSPMAG00000002982	ssb	100	45.647	ENSTSYG00000000097	SSB	81	50.606	Carlito_syrichta
ENSPMAG00000002982	ssb	100	46.512	ENSCPOG00000003338	SSB	82	50.769	Cavia_porcellus
ENSPMAG00000002982	ssb	89	48.438	ENSCCAG00000035147	SSB	93	50.000	Cebus_capucinus
ENSPMAG00000002982	ssb	68	43.522	ENSCATG00000036701	SSB	91	38.793	Cercocebus_atys
ENSPMAG00000002982	ssb	99	33.962	ENSCATG00000042909	-	76	35.913	Cercocebus_atys
ENSPMAG00000002982	ssb	100	46.636	ENSCLAG00000015617	-	81	50.606	Chinchilla_lanigera
ENSPMAG00000002982	ssb	89	43.455	ENSCSAG00000018390	-	82	45.399	Chlorocebus_sabaeus
ENSPMAG00000002982	ssb	89	48.698	ENSCSAG00000015200	SSB	88	44.316	Chlorocebus_sabaeus
ENSPMAG00000002982	ssb	100	46.279	ENSCHOG00000007763	SSB	81	50.909	Choloepus_hoffmanni
ENSPMAG00000002982	ssb	100	45.392	ENSCPBG00000006519	SSB	99	46.774	Chrysemys_picta_bellii
ENSPMAG00000002982	ssb	89	43.915	ENSCANG00000033240	-	80	45.988	Colobus_angolensis_palliatus
ENSPMAG00000002982	ssb	88	38.947	ENSCANG00000028838	-	76	39.877	Colobus_angolensis_palliatus
ENSPMAG00000002982	ssb	89	48.438	ENSCANG00000027695	SSB	99	44.084	Colobus_angolensis_palliatus
ENSPMAG00000002982	ssb	86	45.745	ENSCGRG00001024831	Ssb	90	45.676	Cricetulus_griseus_chok1gshd
ENSPMAG00000002982	ssb	86	45.745	ENSCGRG00000005387	Ssb	90	45.676	Cricetulus_griseus_crigri
ENSPMAG00000002982	ssb	89	43.864	ENSCSEG00000011599	ssb	82	43.976	Cynoglossus_semilaevis
ENSPMAG00000002982	ssb	89	46.494	ENSCVAG00000021558	ssb	91	45.380	Cyprinodon_variegatus
ENSPMAG00000002982	ssb	97	44.548	ENSDARG00000029252	ssb	97	45.902	Danio_rerio
ENSPMAG00000002982	ssb	100	45.581	ENSDNOG00000013450	SSB	81	50.303	Dasypus_novemcinctus
ENSPMAG00000002982	ssb	88	47.326	ENSDORG00000005543	Ssb	81	49.231	Dipodomys_ordii
ENSPMAG00000002982	ssb	80	33.803	FBgn0011638	La	67	36.162	Drosophila_melanogaster
ENSPMAG00000002982	ssb	89	45.953	ENSEBUG00000001237	ssb	82	50.000	Eptatretus_burgeri
ENSPMAG00000002982	ssb	100	45.581	ENSEASG00005022835	SSB	81	49.697	Equus_asinus_asinus
ENSPMAG00000002982	ssb	100	45.581	ENSECAG00000018495	SSB	84	49.697	Equus_caballus
ENSPMAG00000002982	ssb	71	41.254	ENSEEUG00000008077	SSB	78	41.254	Erinaceus_europaeus
ENSPMAG00000002982	ssb	75	50.920	ENSELUG00000020929	ssb	80	51.090	Esox_lucius
ENSPMAG00000002982	ssb	89	48.312	ENSFCAG00000011601	SSB	81	49.394	Felis_catus
ENSPMAG00000002982	ssb	100	47.319	ENSFALG00000000930	SSB	99	47.552	Ficedula_albicollis
ENSPMAG00000002982	ssb	100	46.279	ENSFDAG00000000598	SSB	99	44.988	Fukomys_damarensis
ENSPMAG00000002982	ssb	69	38.487	ENSFHEG00000003268	ssb	92	38.411	Fundulus_heteroclitus
ENSPMAG00000002982	ssb	86	47.230	ENSGMOG00000002664	ssb	91	48.077	Gadus_morhua
ENSPMAG00000002982	ssb	100	46.620	ENSGALG00000009677	SSB	99	47.086	Gallus_gallus
ENSPMAG00000002982	ssb	84	44.384	ENSGAFG00000002749	ssb	88	44.875	Gambusia_affinis
ENSPMAG00000002982	ssb	88	45.974	ENSGACG00000005107	ssb	94	41.146	Gasterosteus_aculeatus
ENSPMAG00000002982	ssb	100	46.154	ENSGAGG00000007807	SSB	99	47.086	Gopherus_agassizii
ENSPMAG00000002982	ssb	89	39.948	ENSGGOG00000024891	-	79	40.854	Gorilla_gorilla
ENSPMAG00000002982	ssb	56	41.564	ENSGGOG00000023471	-	58	48.936	Gorilla_gorilla
ENSPMAG00000002982	ssb	90	43.928	ENSHBUG00000006584	ssb	82	45.260	Haplochromis_burtoni
ENSPMAG00000002982	ssb	100	46.207	ENSHGLG00000017580	-	80	50.606	Heterocephalus_glaber_female
ENSPMAG00000002982	ssb	90	45.337	ENSHGLG00000005832	-	83	46.933	Heterocephalus_glaber_female
ENSPMAG00000002982	ssb	100	43.418	ENSHGLG00000004478	-	81	46.828	Heterocephalus_glaber_female
ENSPMAG00000002982	ssb	100	46.207	ENSHGLG00100003084	-	80	50.606	Heterocephalus_glaber_male
ENSPMAG00000002982	ssb	89	42.857	ENSHGLG00100008767	-	81	43.939	Heterocephalus_glaber_male
ENSPMAG00000002982	ssb	86	45.405	ENSHCOG00000019011	ssb	82	45.846	Hippocampus_comes
ENSPMAG00000002982	ssb	97	46.118	ENSIPUG00000003681	SSB	78	50.000	Ictalurus_punctatus
ENSPMAG00000002982	ssb	100	46.279	ENSSTOG00000008416	SSB	81	50.303	Ictidomys_tridecemlineatus
ENSPMAG00000002982	ssb	79	38.235	ENSJJAG00000016250	-	65	46.222	Jaculus_jaculus
ENSPMAG00000002982	ssb	88	43.687	ENSJJAG00000023158	-	79	48.171	Jaculus_jaculus
ENSPMAG00000002982	ssb	89	45.833	ENSKMAG00000017317	ssb	95	45.833	Kryptolebias_marmoratus
ENSPMAG00000002982	ssb	88	45.526	ENSLBEG00000017345	ssb	81	46.130	Labrus_bergylta
ENSPMAG00000002982	ssb	100	47.086	ENSLACG00000014056	SSB	98	47.086	Latimeria_chalumnae
ENSPMAG00000002982	ssb	99	48.244	ENSLOCG00000007933	ssb	98	48.244	Lepisosteus_oculatus
ENSPMAG00000002982	ssb	70	39.933	ENSLAFG00000026721	-	99	39.933	Loxodonta_africana
ENSPMAG00000002982	ssb	89	44.301	ENSLAFG00000028909	-	81	45.181	Loxodonta_africana
ENSPMAG00000002982	ssb	89	47.132	ENSLAFG00000000867	-	78	51.212	Loxodonta_africana
ENSPMAG00000002982	ssb	82	42.816	ENSMFAG00000041478	-	91	43.963	Macaca_fascicularis
ENSPMAG00000002982	ssb	89	48.438	ENSMFAG00000039066	SSB	96	48.148	Macaca_fascicularis
ENSPMAG00000002982	ssb	89	41.842	ENSMMUG00000011724	-	78	44.444	Macaca_mulatta
ENSPMAG00000002982	ssb	99	33.175	ENSMMUG00000039889	-	76	34.579	Macaca_mulatta
ENSPMAG00000002982	ssb	89	48.438	ENSMMUG00000023051	SSB	96	48.148	Macaca_mulatta
ENSPMAG00000002982	ssb	82	42.816	ENSMNEG00000034698	-	91	43.963	Macaca_nemestrina
ENSPMAG00000002982	ssb	87	40.860	ENSMNEG00000028321	SSB	96	48.148	Macaca_nemestrina
ENSPMAG00000002982	ssb	89	48.438	ENSMLEG00000035717	SSB	99	44.084	Mandrillus_leucophaeus
ENSPMAG00000002982	ssb	89	36.340	ENSMLEG00000042644	-	79	37.461	Mandrillus_leucophaeus
ENSPMAG00000002982	ssb	90	44.246	ENSMAMG00000004800	ssb	96	44.444	Mastacembelus_armatus
ENSPMAG00000002982	ssb	89	44.125	ENSMZEG00005005749	ssb	85	45.231	Maylandia_zebra
ENSPMAG00000002982	ssb	100	46.387	ENSMGAG00000010328	SSB	95	56.061	Meleagris_gallopavo
ENSPMAG00000002982	ssb	87	46.113	ENSMICG00000033304	-	83	48.160	Microcebus_murinus
ENSPMAG00000002982	ssb	100	45.940	ENSMICG00000028252	-	81	50.606	Microcebus_murinus
ENSPMAG00000002982	ssb	89	41.270	ENSMODG00000007027	-	78	42.462	Monodelphis_domestica
ENSPMAG00000002982	ssb	89	45.526	ENSMODG00000019271	-	78	46.769	Monodelphis_domestica
ENSPMAG00000002982	ssb	87	47.105	ENSMODG00000008227	-	80	51.368	Monodelphis_domestica
ENSPMAG00000002982	ssb	75	45.171	ENSMALG00000008045	ssb	78	44.954	Monopterus_albus
ENSPMAG00000002982	ssb	85	47.074	MGP_CAROLIEiJ_G0023629	-	99	51.351	Mus_caroli
ENSPMAG00000002982	ssb	85	46.543	ENSMUSG00000068882	Ssb	99	51.351	Mus_musculus
ENSPMAG00000002982	ssb	85	46.133	MGP_PahariEiJ_G0025081	-	99	50.811	Mus_pahari
ENSPMAG00000002982	ssb	85	46.543	MGP_SPRETEiJ_G0024551	Ssb	99	51.351	Mus_spretus
ENSPMAG00000002982	ssb	87	49.602	ENSMPUG00000000785	SSB	81	50.606	Mustela_putorius_furo
ENSPMAG00000002982	ssb	100	43.274	ENSMLUG00000016316	SSB	79	49.394	Myotis_lucifugus
ENSPMAG00000002982	ssb	89	44.010	ENSNBRG00000012661	ssb	85	45.231	Neolamprologus_brichardi
ENSPMAG00000002982	ssb	77	40.432	ENSNLEG00000028754	-	78	41.049	Nomascus_leucogenys
ENSPMAG00000002982	ssb	89	48.177	ENSNLEG00000004958	SSB	93	50.000	Nomascus_leucogenys
ENSPMAG00000002982	ssb	58	55.200	ENSMEUG00000001650	-	100	55.200	Notamacropus_eugenii
ENSPMAG00000002982	ssb	80	46.667	ENSODEG00000004202	-	91	46.064	Octodon_degus
ENSPMAG00000002982	ssb	90	44.730	ENSONIG00000008776	ssb	82	46.177	Oreochromis_niloticus
ENSPMAG00000002982	ssb	100	45.476	ENSOANG00000008543	SSB	81	52.121	Ornithorhynchus_anatinus
ENSPMAG00000002982	ssb	100	45.814	ENSOCUG00000010396	SSB	90	47.439	Oryctolagus_cuniculus
ENSPMAG00000002982	ssb	99	43.692	ENSORLG00000017208	ssb	98	43.897	Oryzias_latipes
ENSPMAG00000002982	ssb	75	45.706	ENSORLG00020022574	ssb	81	45.566	Oryzias_latipes_hni
ENSPMAG00000002982	ssb	89	45.596	ENSORLG00015016592	ssb	81	45.566	Oryzias_latipes_hsok
ENSPMAG00000002982	ssb	84	46.556	ENSOMEG00000003193	ssb	89	46.537	Oryzias_melastigma
ENSPMAG00000002982	ssb	89	46.599	ENSOGAG00000029768	SSB	78	50.606	Otolemur_garnettii
ENSPMAG00000002982	ssb	100	44.780	ENSOARG00000002906	SSB	81	49.394	Ovis_aries
ENSPMAG00000002982	ssb	78	40.361	ENSPPAG00000006189	-	73	43.446	Pan_paniscus
ENSPMAG00000002982	ssb	89	40.104	ENSPPAG00000032427	-	100	46.875	Pan_paniscus
ENSPMAG00000002982	ssb	100	45.602	ENSPPAG00000042673	SSB	93	50.000	Pan_paniscus
ENSPMAG00000002982	ssb	89	48.312	ENSPPRG00000006599	SSB	81	49.394	Panthera_pardus
ENSPMAG00000002982	ssb	89	48.312	ENSPTIG00000011021	SSB	79	49.394	Panthera_tigris_altaica
ENSPMAG00000002982	ssb	100	45.602	ENSPTRG00000012620	SSB	93	50.000	Pan_troglodytes
ENSPMAG00000002982	ssb	89	38.684	ENSPTRG00000042880	-	78	39.815	Pan_troglodytes
ENSPMAG00000002982	ssb	82	35.260	ENSPANG00000034126	-	77	37.695	Papio_anubis
ENSPMAG00000002982	ssb	89	35.185	ENSPANG00000031877	-	74	37.419	Papio_anubis
ENSPMAG00000002982	ssb	89	48.438	ENSPANG00000007440	SSB	96	48.148	Papio_anubis
ENSPMAG00000002982	ssb	99	46.226	ENSPKIG00000019325	ssb	97	46.667	Paramormyrops_kingsleyae
ENSPMAG00000002982	ssb	100	46.154	ENSPSIG00000002265	SSB	92	47.319	Pelodiscus_sinensis
ENSPMAG00000002982	ssb	88	39.683	ENSPMGG00000020075	ssb	78	42.574	Periophthalmus_magnuspinnatus
ENSPMAG00000002982	ssb	89	50.392	ENSPCIG00000028591	-	82	53.030	Phascolarctos_cinereus
ENSPMAG00000002982	ssb	87	45.383	ENSPFOG00000009650	ssb	89	45.152	Poecilia_formosa
ENSPMAG00000002982	ssb	84	44.628	ENSPLAG00000020498	ssb	89	45.152	Poecilia_latipinna
ENSPMAG00000002982	ssb	87	45.119	ENSPMEG00000001051	ssb	89	44.875	Poecilia_mexicana
ENSPMAG00000002982	ssb	89	44.186	ENSPREG00000003708	ssb	93	44.875	Poecilia_reticulata
ENSPMAG00000002982	ssb	89	48.177	ENSPPYG00000012919	SSB	99	43.852	Pongo_abelii
ENSPMAG00000002982	ssb	95	44.963	ENSPCAG00000010276	SSB	98	44.554	Procavia_capensis
ENSPMAG00000002982	ssb	100	44.366	ENSPCOG00000015741	-	92	50.000	Propithecus_coquereli
ENSPMAG00000002982	ssb	100	39.443	ENSPCOG00000023189	-	98	37.587	Propithecus_coquereli
ENSPMAG00000002982	ssb	84	47.645	ENSPVAG00000006615	SSB	87	49.675	Pteropus_vampyrus
ENSPMAG00000002982	ssb	89	44.125	ENSPNYG00000006444	ssb	85	45.231	Pundamilia_nyererei
ENSPMAG00000002982	ssb	74	49.216	ENSPNAG00000011708	ssb	78	49.688	Pygocentrus_nattereri
ENSPMAG00000002982	ssb	87	46.114	ENSRNOG00000007998	Ssb	79	48.936	Rattus_norvegicus
ENSPMAG00000002982	ssb	87	46.011	ENSRNOG00000011606	AABR07061825.1	81	47.720	Rattus_norvegicus
ENSPMAG00000002982	ssb	83	41.429	ENSRBIG00000041232	-	82	44.697	Rhinopithecus_bieti
ENSPMAG00000002982	ssb	89	42.268	ENSRBIG00000041608	-	97	39.948	Rhinopithecus_bieti
ENSPMAG00000002982	ssb	89	41.406	ENSRBIG00000041972	SSB	96	48.148	Rhinopithecus_bieti
ENSPMAG00000002982	ssb	99	33.021	ENSRBIG00000029918	-	75	34.356	Rhinopithecus_bieti
ENSPMAG00000002982	ssb	89	48.438	ENSRROG00000040346	SSB	96	48.148	Rhinopithecus_roxellana
ENSPMAG00000002982	ssb	86	42.350	ENSRROG00000031684	-	84	46.528	Rhinopithecus_roxellana
ENSPMAG00000002982	ssb	78	45.588	ENSRROG00000034102	-	70	46.690	Rhinopithecus_roxellana
ENSPMAG00000002982	ssb	99	37.471	ENSRROG00000007149	-	78	40.184	Rhinopithecus_roxellana
ENSPMAG00000002982	ssb	89	48.438	ENSSBOG00000027204	SSB	99	44.084	Saimiri_boliviensis_boliviensis
ENSPMAG00000002982	ssb	89	49.869	ENSSHAG00000018062	SSB	81	52.424	Sarcophilus_harrisii
ENSPMAG00000002982	ssb	99	45.561	ENSSFOG00015000550	ssb	97	47.368	Scleropages_formosus
ENSPMAG00000002982	ssb	85	46.467	ENSSMAG00000013885	ssb	95	45.706	Scophthalmus_maximus
ENSPMAG00000002982	ssb	89	44.845	ENSSDUG00000020117	ssb	95	45.312	Seriola_dumerili
ENSPMAG00000002982	ssb	88	44.681	ENSSLDG00000002525	ssb	94	45.213	Seriola_lalandi_dorsalis
ENSPMAG00000002982	ssb	95	40.931	ENSSARG00000007747	SSB	80	43.182	Sorex_araneus
ENSPMAG00000002982	ssb	100	46.853	ENSSPUG00000012112	SSB	99	45.921	Sphenodon_punctatus
ENSPMAG00000002982	ssb	86	46.237	ENSSPAG00000005696	ssb	83	46.562	Stegastes_partitus
ENSPMAG00000002982	ssb	87	46.092	ENSSSCG00000015938	SSB	82	47.720	Sus_scrofa
ENSPMAG00000002982	ssb	88	49.474	ENSTGUG00000007942	SSB	99	47.786	Taeniopygia_guttata
ENSPMAG00000002982	ssb	90	44.730	ENSTRUG00000017839	ssb	82	45.897	Takifugu_rubripes
ENSPMAG00000002982	ssb	87	43.421	ENSTNIG00000000915	ssb	91	46.201	Tetraodon_nigroviridis
ENSPMAG00000002982	ssb	82	52.174	ENSTBEG00000009056	SSB	71	52.174	Tupaia_belangeri
ENSPMAG00000002982	ssb	100	45.688	ENSTTRG00000002152	SSB	81	50.152	Tursiops_truncatus
ENSPMAG00000002982	ssb	89	48.964	ENSUAMG00000027833	SSB	86	50.303	Ursus_americanus
ENSPMAG00000002982	ssb	89	48.831	ENSUMAG00000013907	SSB	81	50.303	Ursus_maritimus
ENSPMAG00000002982	ssb	89	48.825	ENSVPAG00000007183	SSB	82	50.303	Vicugna_pacos
ENSPMAG00000002982	ssb	89	49.091	ENSVVUG00000016573	SSB	70	47.709	Vulpes_vulpes
ENSPMAG00000002982	ssb	100	45.392	ENSXETG00000025402	ssb	77	49.091	Xenopus_tropicalis
ENSPMAG00000002982	ssb	89	44.882	ENSXCOG00000019109	ssb	95	45.013	Xiphophorus_couchianus
ENSPMAG00000002982	ssb	87	45.596	ENSXMAG00000004888	ssb	88	45.205	Xiphophorus_maculatus