EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000003064 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 540 bases
Position: chrGL476750:206073-206612
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003331	S10_plectin	PF03501.15	5.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003346	-	483	-	ENSPMAP00000003331	161 (aa)	-	S4RDP9

Gene Model

Click here to download ENSPMAG00000003064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003064	-	87	46.575	ENSPMAG00000009236	rps10	95	46.541
ENSPMAG00000003064	-	94	51.705	ENSPMAG00000010266	-	95	51.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003064	-	64	61.165	ENSAPOG00000014059	-	71	61.165	Acanthochromis_polyacanthus
ENSPMAG00000003064	-	78	42.424	ENSAPOG00000016494	-	68	42.424	Acanthochromis_polyacanthus
ENSPMAG00000003064	-	61	64.646	ENSACIG00000013806	-	57	62.136	Amphilophus_citrinellus
ENSPMAG00000003064	-	81	45.714	ENSACIG00000019704	-	72	45.714	Amphilophus_citrinellus
ENSPMAG00000003064	-	68	52.294	ENSAOCG00000007730	-	63	52.294	Amphiprion_ocellaris
ENSPMAG00000003064	-	78	52.083	ENSAOCG00000011000	-	84	52.083	Amphiprion_ocellaris
ENSPMAG00000003064	-	64	64.078	ENSAPEG00000019531	-	58	64.078	Amphiprion_percula
ENSPMAG00000003064	-	55	48.864	ENSAPEG00000017745	-	56	48.864	Amphiprion_percula
ENSPMAG00000003064	-	60	54.167	ENSATEG00000004340	-	67	54.737	Anabas_testudineus
ENSPMAG00000003064	-	88	43.046	ENSACLG00000001013	-	88	43.046	Astatotilapia_calliptera
ENSPMAG00000003064	-	64	60.194	ENSAMXG00000037914	-	62	60.194	Astyanax_mexicanus
ENSPMAG00000003064	-	98	39.241	WBGene00004479	rps-10	100	39.241	Caenorhabditis_elegans
ENSPMAG00000003064	-	92	41.892	ENSCING00000006180	-	100	42.331	Ciona_intestinalis
ENSPMAG00000003064	-	79	50.685	ENSCSEG00000009179	-	61	64.078	Cynoglossus_semilaevis
ENSPMAG00000003064	-	96	42.500	FBgn0027494	RpS10a	98	42.857	Drosophila_melanogaster
ENSPMAG00000003064	-	95	47.771	FBgn0285947	RpS10b	97	47.771	Drosophila_melanogaster
ENSPMAG00000003064	-	85	47.445	ENSEBUG00000015221	-	83	47.445	Eptatretus_burgeri
ENSPMAG00000003064	-	82	53.571	ENSEASG00005009727	-	62	53.571	Equus_asinus_asinus
ENSPMAG00000003064	-	73	61.017	ENSECAG00000039725	-	57	61.017	Equus_caballus
ENSPMAG00000003064	-	64	65.049	ENSFHEG00000008769	-	64	65.049	Fundulus_heteroclitus
ENSPMAG00000003064	-	61	65.306	ENSGAFG00000001335	-	50	65.306	Gambusia_affinis
ENSPMAG00000003064	-	88	43.046	ENSHBUG00000018067	-	88	43.046	Haplochromis_burtoni
ENSPMAG00000003064	-	64	62.136	ENSHBUG00000023819	-	62	62.136	Haplochromis_burtoni
ENSPMAG00000003064	-	69	59.459	ENSLBEG00000020432	-	73	59.459	Labrus_bergylta
ENSPMAG00000003064	-	88	52.174	ENSLACG00000010998	-	93	52.174	Latimeria_chalumnae
ENSPMAG00000003064	-	61	63.636	ENSMZEG00005007838	-	62	61.165	Maylandia_zebra
ENSPMAG00000003064	-	88	43.046	ENSMZEG00005026198	-	88	43.046	Maylandia_zebra
ENSPMAG00000003064	-	100	48.148	ENSMMOG00000003228	-	86	48.148	Mola_mola
ENSPMAG00000003064	-	89	48.993	ENSMMOG00000014380	-	78	48.993	Mola_mola
ENSPMAG00000003064	-	58	58.511	ENSMALG00000015614	-	58	58.511	Monopterus_albus
ENSPMAG00000003064	-	88	42.384	ENSNBRG00000016554	-	88	42.384	Neolamprologus_brichardi
ENSPMAG00000003064	-	64	62.136	ENSNBRG00000008848	-	72	62.136	Neolamprologus_brichardi
ENSPMAG00000003064	-	88	50.920	ENSPKIG00000013061	-	90	50.920	Paramormyrops_kingsleyae
ENSPMAG00000003064	-	63	63.725	ENSPMGG00000017071	-	55	63.725	Periophthalmus_magnuspinnatus
ENSPMAG00000003064	-	64	63.107	ENSPLAG00000012690	-	79	52.448	Poecilia_latipinna
ENSPMAG00000003064	-	64	62.136	ENSPNYG00000012665	-	62	62.136	Pundamilia_nyererei
ENSPMAG00000003064	-	82	43.662	ENSPNYG00000006286	-	83	43.662	Pundamilia_nyererei
ENSPMAG00000003064	-	83	46.853	ENSPNAG00000021290	-	81	46.853	Pygocentrus_nattereri
ENSPMAG00000003064	-	62	39.000	YMR230W	RPS10B	93	39.000	Saccharomyces_cerevisiae
ENSPMAG00000003064	-	62	41.000	YOR293W	RPS10A	93	41.000	Saccharomyces_cerevisiae
ENSPMAG00000003064	-	61	65.657	ENSSFOG00015012004	-	56	65.657	Scleropages_formosus
ENSPMAG00000003064	-	78	53.472	ENSSFOG00015009603	-	72	53.472	Scleropages_formosus
ENSPMAG00000003064	-	69	52.679	ENSSDUG00000011052	-	71	52.679	Seriola_dumerili
ENSPMAG00000003064	-	64	62.136	ENSSDUG00000010997	-	61	62.136	Seriola_dumerili
ENSPMAG00000003064	-	70	51.327	ENSSLDG00000016257	-	64	51.327	Seriola_lalandi_dorsalis
ENSPMAG00000003064	-	64	62.136	ENSSLDG00000012473	-	66	62.136	Seriola_lalandi_dorsalis
ENSPMAG00000003064	-	59	58.947	ENSSPAG00000012512	-	50	58.947	Stegastes_partitus
ENSPMAG00000003064	-	68	62.385	ENSSPAG00000015615	-	85	62.385	Stegastes_partitus
ENSPMAG00000003064	-	79	55.118	ENSSSCG00000033521	-	61	65.657	Sus_scrofa
ENSPMAG00000003064	-	98	51.163	ENSXETG00000032983	-	85	51.744	Xenopus_tropicalis
ENSPMAG00000003064	-	64	63.107	ENSXCOG00000016917	-	64	63.107	Xiphophorus_couchianus
ENSPMAG00000003064	-	76	54.478	ENSXMAG00000029046	-	76	54.478	Xiphophorus_maculatus