EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003098 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: -
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 38770 bases
Position: chrGL476517:21281-60050
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003399	Suf	PF05843.14	5.6e-15	1	1
ENSPMAP00000003399	S1	PF00575.23	5.4e-54	1	2
ENSPMAP00000003399	S1	PF00575.23	5.4e-54	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003414	-	5845	-	ENSPMAP00000003399	1877 (aa)	-	S4RDW7

Gene Model

Click here to download ENSPMAG00000003098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003098	pdcd11	99	41.842	ENSG00000148843	PDCD11	99	41.579	Homo_sapiens
ENSPMAG00000003098	pdcd11	99	40.632	ENSAPOG00000015629	pdcd11	99	40.421	Acanthochromis_polyacanthus
ENSPMAG00000003098	pdcd11	99	42.257	ENSAMEG00000017935	PDCD11	99	42.257	Ailuropoda_melanoleuca
ENSPMAG00000003098	pdcd11	50	36.653	ENSACIG00000006458	-	99	36.653	Amphilophus_citrinellus
ENSPMAG00000003098	pdcd11	99	41.285	ENSAOCG00000015287	pdcd11	99	41.053	Amphiprion_ocellaris
ENSPMAG00000003098	pdcd11	54	38.551	ENSAPEG00000020240	pdcd11	99	38.551	Amphiprion_percula
ENSPMAG00000003098	pdcd11	99	40.485	ENSATEG00000021043	pdcd11	99	40.306	Anabas_testudineus
ENSPMAG00000003098	pdcd11	99	40.410	ENSAPLG00000010301	PDCD11	99	39.747	Anas_platyrhynchos
ENSPMAG00000003098	pdcd11	99	41.684	ENSACAG00000004796	PDCD11	99	42.091	Anolis_carolinensis
ENSPMAG00000003098	pdcd11	99	41.675	ENSANAG00000034576	PDCD11	99	41.517	Aotus_nancymaae
ENSPMAG00000003098	pdcd11	91	51.791	ENSACLG00000018236	pdcd11	98	57.655	Astatotilapia_calliptera
ENSPMAG00000003098	pdcd11	95	36.835	ENSAMXG00000005458	pdcd11	97	57.616	Astyanax_mexicanus
ENSPMAG00000003098	pdcd11	99	42.310	ENSBTAG00000009715	PDCD11	99	42.069	Bos_taurus
ENSPMAG00000003098	pdcd11	99	41.421	ENSCJAG00000018257	PDCD11	99	41.474	Callithrix_jacchus
ENSPMAG00000003098	pdcd11	99	42.368	ENSCAFG00000010411	PDCD11	99	42.053	Canis_familiaris
ENSPMAG00000003098	pdcd11	99	42.614	ENSCAFG00020010369	PDCD11	99	42.402	Canis_lupus_dingo
ENSPMAG00000003098	pdcd11	99	42.100	ENSCHIG00000025218	PDCD11	99	41.815	Capra_hircus
ENSPMAG00000003098	pdcd11	96	42.676	ENSTSYG00000033423	PDCD11	99	42.231	Carlito_syrichta
ENSPMAG00000003098	pdcd11	94	38.500	ENSCAPG00000005386	PDCD11	99	38.710	Cavia_aperea
ENSPMAG00000003098	pdcd11	99	41.741	ENSCPOG00000010957	PDCD11	99	42.252	Cavia_porcellus
ENSPMAG00000003098	pdcd11	99	41.328	ENSCCAG00000018950	PDCD11	99	41.223	Cebus_capucinus
ENSPMAG00000003098	pdcd11	99	41.925	ENSCATG00000044331	PDCD11	99	41.693	Cercocebus_atys
ENSPMAG00000003098	pdcd11	99	42.328	ENSCLAG00000001029	PDCD11	99	42.525	Chinchilla_lanigera
ENSPMAG00000003098	pdcd11	99	41.789	ENSCSAG00000005346	PDCD11	99	41.684	Chlorocebus_sabaeus
ENSPMAG00000003098	pdcd11	76	68.462	ENSCHOG00000004796	PDCD11	69	68.462	Choloepus_hoffmanni
ENSPMAG00000003098	pdcd11	91	60.556	ENSCPBG00000024487	PDCD11	99	60.556	Chrysemys_picta_bellii
ENSPMAG00000003098	pdcd11	86	42.205	ENSCING00000002715	-	95	42.205	Ciona_intestinalis
ENSPMAG00000003098	pdcd11	99	42.053	ENSCANG00000043300	PDCD11	99	41.842	Colobus_angolensis_palliatus
ENSPMAG00000003098	pdcd11	99	41.715	ENSCGRG00001006458	Pdcd11	99	42.186	Cricetulus_griseus_chok1gshd
ENSPMAG00000003098	pdcd11	99	41.662	ENSCGRG00000003583	Pdcd11	99	42.080	Cricetulus_griseus_crigri
ENSPMAG00000003098	pdcd11	90	56.196	ENSCVAG00000018903	pdcd11	97	55.620	Cyprinodon_variegatus
ENSPMAG00000003098	pdcd11	99	38.930	ENSDARG00000052480	pdcd11	99	38.771	Danio_rerio
ENSPMAG00000003098	pdcd11	99	41.470	ENSDNOG00000013838	PDCD11	99	41.627	Dasypus_novemcinctus
ENSPMAG00000003098	pdcd11	99	39.831	ENSDORG00000010420	Pdcd11	99	40.666	Dipodomys_ordii
ENSPMAG00000003098	pdcd11	52	35.215	FBgn0039182	CG5728	71	34.615	Drosophila_melanogaster
ENSPMAG00000003098	pdcd11	84	42.188	ENSETEG00000000813	PDCD11	90	41.463	Echinops_telfairi
ENSPMAG00000003098	pdcd11	62	58.446	ENSEBUG00000002358	-	88	60.072	Eptatretus_burgeri
ENSPMAG00000003098	pdcd11	95	43.212	ENSEASG00005015159	PDCD11	99	43.109	Equus_asinus_asinus
ENSPMAG00000003098	pdcd11	99	42.714	ENSECAG00000020507	PDCD11	99	42.609	Equus_caballus
ENSPMAG00000003098	pdcd11	92	42.079	ENSEEUG00000009245	PDCD11	86	41.688	Erinaceus_europaeus
ENSPMAG00000003098	pdcd11	99	40.637	ENSELUG00000004211	pdcd11	99	40.466	Esox_lucius
ENSPMAG00000003098	pdcd11	99	42.346	ENSFCAG00000002384	PDCD11	99	42.053	Felis_catus
ENSPMAG00000003098	pdcd11	99	41.053	ENSFALG00000008775	PDCD11	99	40.609	Ficedula_albicollis
ENSPMAG00000003098	pdcd11	99	41.592	ENSFDAG00000009532	PDCD11	99	41.592	Fukomys_damarensis
ENSPMAG00000003098	pdcd11	88	60.201	ENSFHEG00000022997	pdcd11	95	60.606	Fundulus_heteroclitus
ENSPMAG00000003098	pdcd11	92	39.632	ENSGMOG00000004186	pdcd11	92	45.103	Gadus_morhua
ENSPMAG00000003098	pdcd11	76	38.323	ENSGALG00000008265	PDCD11	98	38.219	Gallus_gallus
ENSPMAG00000003098	pdcd11	95	44.178	ENSGAFG00000012806	pdcd11	99	44.068	Gambusia_affinis
ENSPMAG00000003098	pdcd11	99	39.432	ENSGACG00000018233	pdcd11	94	54.642	Gasterosteus_aculeatus
ENSPMAG00000003098	pdcd11	95	43.437	ENSGAGG00000024314	PDCD11	99	43.385	Gopherus_agassizii
ENSPMAG00000003098	pdcd11	99	42.022	ENSGGOG00000011621	PDCD11	99	41.789	Gorilla_gorilla
ENSPMAG00000003098	pdcd11	99	41.939	ENSHGLG00000001462	PDCD11	99	41.750	Heterocephalus_glaber_female
ENSPMAG00000003098	pdcd11	99	41.412	ENSHGLG00100018779	PDCD11	99	41.118	Heterocephalus_glaber_male
ENSPMAG00000003098	pdcd11	99	39.672	ENSHCOG00000016006	pdcd11	99	39.471	Hippocampus_comes
ENSPMAG00000003098	pdcd11	62	37.702	ENSIPUG00000015102	pdcd11	98	38.470	Ictalurus_punctatus
ENSPMAG00000003098	pdcd11	99	41.026	ENSSTOG00000014553	PDCD11	99	41.816	Ictidomys_tridecemlineatus
ENSPMAG00000003098	pdcd11	99	42.281	ENSJJAG00000015523	Pdcd11	99	42.479	Jaculus_jaculus
ENSPMAG00000003098	pdcd11	99	41.432	ENSLOCG00000011818	pdcd11	99	41.304	Lepisosteus_oculatus
ENSPMAG00000003098	pdcd11	99	42.933	ENSLAFG00000008398	PDCD11	99	42.427	Loxodonta_africana
ENSPMAG00000003098	pdcd11	99	41.895	ENSMFAG00000044058	PDCD11	99	41.662	Macaca_fascicularis
ENSPMAG00000003098	pdcd11	99	41.895	ENSMMUG00000007058	PDCD11	99	41.662	Macaca_mulatta
ENSPMAG00000003098	pdcd11	99	41.947	ENSMNEG00000040726	PDCD11	99	41.715	Macaca_nemestrina
ENSPMAG00000003098	pdcd11	99	41.971	ENSMLEG00000040978	PDCD11	99	41.702	Mandrillus_leucophaeus
ENSPMAG00000003098	pdcd11	99	40.868	ENSMAMG00000009572	pdcd11	99	40.613	Mastacembelus_armatus
ENSPMAG00000003098	pdcd11	99	40.251	ENSMGAG00000010482	PDCD11	99	40.704	Meleagris_gallopavo
ENSPMAG00000003098	pdcd11	88	47.453	ENSMAUG00000014924	Pdcd11	95	47.051	Mesocricetus_auratus
ENSPMAG00000003098	pdcd11	99	42.050	ENSMICG00000012421	PDCD11	99	41.935	Microcebus_murinus
ENSPMAG00000003098	pdcd11	99	41.143	ENSMOCG00000021792	Pdcd11	99	41.368	Microtus_ochrogaster
ENSPMAG00000003098	pdcd11	99	35.279	ENSMMOG00000007572	pdcd11	98	38.682	Mola_mola
ENSPMAG00000003098	pdcd11	99	38.752	ENSMODG00000011077	PDCD11	99	38.732	Monodelphis_domestica
ENSPMAG00000003098	pdcd11	99	34.924	ENSMALG00000003859	pdcd11	98	38.075	Monopterus_albus
ENSPMAG00000003098	pdcd11	99	41.930	MGP_CAROLIEiJ_G0023050	Pdcd11	99	42.139	Mus_caroli
ENSPMAG00000003098	pdcd11	99	41.737	ENSMUSG00000025047	Pdcd11	99	41.803	Mus_musculus
ENSPMAG00000003098	pdcd11	99	41.618	MGP_PahariEiJ_G0014540	Pdcd11	99	41.724	Mus_pahari
ENSPMAG00000003098	pdcd11	99	41.675	MGP_SPRETEiJ_G0023971	Pdcd11	99	41.689	Mus_spretus
ENSPMAG00000003098	pdcd11	99	42.241	ENSMPUG00000016829	PDCD11	99	42.466	Mustela_putorius_furo
ENSPMAG00000003098	pdcd11	99	41.981	ENSMLUG00000004997	PDCD11	99	42.020	Myotis_lucifugus
ENSPMAG00000003098	pdcd11	99	40.632	ENSNGAG00000018143	Pdcd11	99	40.991	Nannospalax_galili
ENSPMAG00000003098	pdcd11	81	52.532	ENSNBRG00000021596	pdcd11	94	46.724	Neolamprologus_brichardi
ENSPMAG00000003098	pdcd11	99	40.620	ENSNLEG00000026700	PDCD11	99	40.590	Nomascus_leucogenys
ENSPMAG00000003098	pdcd11	65	62.338	ENSMEUG00000013719	-	66	62.338	Notamacropus_eugenii
ENSPMAG00000003098	pdcd11	99	40.178	ENSOPRG00000010593	PDCD11	99	39.969	Ochotona_princeps
ENSPMAG00000003098	pdcd11	99	42.201	ENSODEG00000008079	PDCD11	99	42.097	Octodon_degus
ENSPMAG00000003098	pdcd11	99	40.971	ENSOANG00000001636	-	99	40.643	Ornithorhynchus_anatinus
ENSPMAG00000003098	pdcd11	99	42.136	ENSOCUG00000006312	PDCD11	99	42.136	Oryctolagus_cuniculus
ENSPMAG00000003098	pdcd11	99	41.379	ENSORLG00020003642	pdcd11	99	41.208	Oryzias_latipes_hni
ENSPMAG00000003098	pdcd11	99	41.017	ENSORLG00015001618	pdcd11	99	40.899	Oryzias_latipes_hsok
ENSPMAG00000003098	pdcd11	66	41.261	ENSOMEG00000010904	pdcd11	98	41.341	Oryzias_melastigma
ENSPMAG00000003098	pdcd11	99	41.605	ENSOGAG00000008683	PDCD11	99	41.992	Otolemur_garnettii
ENSPMAG00000003098	pdcd11	99	41.832	ENSOARG00000003719	PDCD11	99	41.658	Ovis_aries
ENSPMAG00000003098	pdcd11	99	42.462	ENSPPAG00000024593	PDCD11	99	42.462	Pan_paniscus
ENSPMAG00000003098	pdcd11	99	42.504	ENSPPRG00000015133	PDCD11	99	42.263	Panthera_pardus
ENSPMAG00000003098	pdcd11	99	42.346	ENSPTIG00000011433	PDCD11	99	42.105	Panthera_tigris_altaica
ENSPMAG00000003098	pdcd11	99	41.811	ENSPTRG00000002911	PDCD11	99	41.579	Pan_troglodytes
ENSPMAG00000003098	pdcd11	99	42.000	ENSPANG00000020959	PDCD11	99	41.767	Papio_anubis
ENSPMAG00000003098	pdcd11	99	40.998	ENSPKIG00000000973	pdcd11	99	40.721	Paramormyrops_kingsleyae
ENSPMAG00000003098	pdcd11	77	40.220	ENSPSIG00000005102	PDCD11	94	40.426	Pelodiscus_sinensis
ENSPMAG00000003098	pdcd11	65	54.921	ENSPMGG00000007289	pdcd11	89	56.856	Periophthalmus_magnuspinnatus
ENSPMAG00000003098	pdcd11	99	41.903	ENSPEMG00000010315	Pdcd11	99	42.225	Peromyscus_maniculatus_bairdii
ENSPMAG00000003098	pdcd11	99	40.636	ENSPCIG00000001118	PDCD11	99	40.961	Phascolarctos_cinereus
ENSPMAG00000003098	pdcd11	99	41.689	ENSPFOG00000006012	pdcd11	99	41.605	Poecilia_formosa
ENSPMAG00000003098	pdcd11	99	38.340	ENSPLAG00000014494	pdcd11	98	39.936	Poecilia_latipinna
ENSPMAG00000003098	pdcd11	94	48.654	ENSPMEG00000018177	pdcd11	98	47.942	Poecilia_mexicana
ENSPMAG00000003098	pdcd11	99	41.052	ENSPREG00000000475	pdcd11	99	40.924	Poecilia_reticulata
ENSPMAG00000003098	pdcd11	99	38.272	ENSPPYG00000002621	PDCD11	99	38.087	Pongo_abelii
ENSPMAG00000003098	pdcd11	65	50.936	ENSPCAG00000011663	PDCD11	66	50.188	Procavia_capensis
ENSPMAG00000003098	pdcd11	92	45.136	ENSPCOG00000023327	PDCD11	99	44.747	Propithecus_coquereli
ENSPMAG00000003098	pdcd11	99	42.183	ENSPVAG00000004176	PDCD11	99	41.973	Pteropus_vampyrus
ENSPMAG00000003098	pdcd11	95	40.677	ENSPNAG00000017225	pdcd11	99	40.400	Pygocentrus_nattereri
ENSPMAG00000003098	pdcd11	99	41.497	ENSRNOG00000020304	Pdcd11	99	41.930	Rattus_norvegicus
ENSPMAG00000003098	pdcd11	99	41.947	ENSRBIG00000011889	PDCD11	99	41.873	Rhinopithecus_bieti
ENSPMAG00000003098	pdcd11	99	42.000	ENSRROG00000030483	PDCD11	99	41.925	Rhinopithecus_roxellana
ENSPMAG00000003098	pdcd11	57	43.609	YMR229C	-	74	43.609	Saccharomyces_cerevisiae
ENSPMAG00000003098	pdcd11	99	40.000	ENSSBOG00000030308	PDCD11	99	40.000	Saimiri_boliviensis_boliviensis
ENSPMAG00000003098	pdcd11	99	40.250	ENSSHAG00000018258	PDCD11	99	40.430	Sarcophilus_harrisii
ENSPMAG00000003098	pdcd11	99	42.147	ENSSFOG00015003881	pdcd11	99	41.671	Scleropages_formosus
ENSPMAG00000003098	pdcd11	99	40.579	ENSSMAG00000006612	pdcd11	99	40.263	Scophthalmus_maximus
ENSPMAG00000003098	pdcd11	94	44.977	ENSSDUG00000021302	pdcd11	99	44.530	Seriola_dumerili
ENSPMAG00000003098	pdcd11	72	65.385	ENSSARG00000002540	PDCD11	67	65.385	Sorex_araneus
ENSPMAG00000003098	pdcd11	97	39.069	ENSSPAG00000017558	pdcd11	99	39.234	Stegastes_partitus
ENSPMAG00000003098	pdcd11	99	42.520	ENSSSCG00000010599	PDCD11	99	42.967	Sus_scrofa
ENSPMAG00000003098	pdcd11	69	38.131	ENSTRUG00000014291	pdcd11	99	38.357	Takifugu_rubripes
ENSPMAG00000003098	pdcd11	99	40.126	ENSTNIG00000012085	pdcd11	99	39.708	Tetraodon_nigroviridis
ENSPMAG00000003098	pdcd11	95	58.571	ENSTBEG00000001893	PDCD11	96	58.000	Tupaia_belangeri
ENSPMAG00000003098	pdcd11	89	66.000	ENSTTRG00000003356	PDCD11	90	66.000	Tursiops_truncatus
ENSPMAG00000003098	pdcd11	99	42.152	ENSUAMG00000018015	PDCD11	99	42.017	Ursus_americanus
ENSPMAG00000003098	pdcd11	99	41.592	ENSUMAG00000023567	PDCD11	99	41.434	Ursus_maritimus
ENSPMAG00000003098	pdcd11	63	42.857	ENSVPAG00000007405	PDCD11	78	42.857	Vicugna_pacos
ENSPMAG00000003098	pdcd11	99	42.368	ENSVVUG00000004457	PDCD11	99	42.211	Vulpes_vulpes
ENSPMAG00000003098	pdcd11	99	39.782	ENSXETG00000009482	pdcd11	99	39.605	Xenopus_tropicalis
ENSPMAG00000003098	pdcd11	99	34.744	ENSXCOG00000012420	pdcd11	93	57.014	Xiphophorus_couchianus
ENSPMAG00000003098	pdcd11	99	41.277	ENSXMAG00000004638	pdcd11	99	41.335	Xiphophorus_maculatus