EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003209 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 16970 bases
Position: chrGL478539:22463-39432
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003511	POP1	PF06978.11	1.1e-38	1	2
ENSPMAP00000003511	POP1	PF06978.11	1.1e-38	2	2
ENSPMAP00000003511	POPLD	PF08170.12	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003526	POP1-201	2799	-	ENSPMAP00000003511	932 (aa)	-	S4RE79

Gene Model

Click here to download ENSPMAG00000003209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003209	POP1	100	43.776	ENSG00000104356	POP1	90	44.034	Homo_sapiens
ENSPMAG00000003209	POP1	99	43.020	ENSAPOG00000008198	pop1	91	43.125	Acanthochromis_polyacanthus
ENSPMAG00000003209	POP1	100	42.797	ENSAMEG00000000556	POP1	90	42.797	Ailuropoda_melanoleuca
ENSPMAG00000003209	POP1	100	42.947	ENSACIG00000004169	POP1	93	42.947	Amphilophus_citrinellus
ENSPMAG00000003209	POP1	99	42.029	ENSAOCG00000010991	pop1	91	42.364	Amphiprion_ocellaris
ENSPMAG00000003209	POP1	99	41.805	ENSAPEG00000007607	pop1	95	42.243	Amphiprion_percula
ENSPMAG00000003209	POP1	99	42.503	ENSATEG00000024814	POP1	92	42.813	Anabas_testudineus
ENSPMAG00000003209	POP1	99	42.993	ENSAPLG00000014418	POP1	97	43.098	Anas_platyrhynchos
ENSPMAG00000003209	POP1	99	42.782	ENSACAG00000016083	POP1	90	42.360	Anolis_carolinensis
ENSPMAG00000003209	POP1	86	57.627	ENSANAG00000026360	POP1	88	57.627	Aotus_nancymaae
ENSPMAG00000003209	POP1	99	42.616	ENSACLG00000010951	pop1	91	42.842	Astatotilapia_calliptera
ENSPMAG00000003209	POP1	100	40.061	ENSAMXG00000014483	POP1	84	48.837	Astyanax_mexicanus
ENSPMAG00000003209	POP1	100	43.492	ENSBTAG00000012596	POP1	90	43.677	Bos_taurus
ENSPMAG00000003209	POP1	100	43.776	ENSCJAG00000015567	POP1	91	43.611	Callithrix_jacchus
ENSPMAG00000003209	POP1	100	43.309	ENSCAFG00000000469	POP1	90	42.887	Canis_familiaris
ENSPMAG00000003209	POP1	100	43.175	ENSCAFG00020026765	POP1	90	42.751	Canis_lupus_dingo
ENSPMAG00000003209	POP1	100	44.468	ENSCHIG00000017066	POP1	90	44.397	Capra_hircus
ENSPMAG00000003209	POP1	100	43.560	ENSTSYG00000003097	POP1	90	43.396	Carlito_syrichta
ENSPMAG00000003209	POP1	100	44.000	ENSCAPG00000007251	POP1	90	43.579	Cavia_aperea
ENSPMAG00000003209	POP1	100	44.762	ENSCPOG00000002901	POP1	90	44.339	Cavia_porcellus
ENSPMAG00000003209	POP1	100	43.836	ENSCCAG00000018939	POP1	91	43.611	Cebus_capucinus
ENSPMAG00000003209	POP1	100	44.351	ENSCATG00000040916	POP1	90	43.928	Cercocebus_atys
ENSPMAG00000003209	POP1	100	44.597	ENSCLAG00000007208	POP1	87	44.444	Chinchilla_lanigera
ENSPMAG00000003209	POP1	100	43.717	ENSCSAG00000012340	POP1	99	43.506	Chlorocebus_sabaeus
ENSPMAG00000003209	POP1	100	42.267	ENSCHOG00000011432	POP1	94	42.206	Choloepus_hoffmanni
ENSPMAG00000003209	POP1	100	43.638	ENSCPBG00000006373	POP1	89	43.966	Chrysemys_picta_bellii
ENSPMAG00000003209	POP1	90	33.333	ENSCING00000008323	-	87	33.333	Ciona_intestinalis
ENSPMAG00000003209	POP1	100	43.432	ENSCANG00000001647	POP1	90	43.538	Colobus_angolensis_palliatus
ENSPMAG00000003209	POP1	99	43.116	ENSCGRG00001017308	Pop1	90	43.565	Cricetulus_griseus_chok1gshd
ENSPMAG00000003209	POP1	99	40.555	ENSCGRG00000010824	Pop1	92	41.034	Cricetulus_griseus_crigri
ENSPMAG00000003209	POP1	99	43.487	ENSCSEG00000008737	POP1	91	43.487	Cynoglossus_semilaevis
ENSPMAG00000003209	POP1	99	42.587	ENSCVAG00000022248	pop1	91	42.918	Cyprinodon_variegatus
ENSPMAG00000003209	POP1	100	41.701	ENSDNOG00000019974	POP1	90	41.982	Dasypus_novemcinctus
ENSPMAG00000003209	POP1	100	40.952	ENSDORG00000015384	Pop1	90	39.487	Dipodomys_ordii
ENSPMAG00000003209	POP1	66	33.861	FBgn0026702	l(1)G0045	68	33.861	Drosophila_melanogaster
ENSPMAG00000003209	POP1	87	46.008	ENSETEG00000007839	POP1	78	46.008	Echinops_telfairi
ENSPMAG00000003209	POP1	52	41.968	ENSEBUG00000014694	-	95	40.990	Eptatretus_burgeri
ENSPMAG00000003209	POP1	100	43.170	ENSEASG00005003189	POP1	88	42.887	Equus_asinus_asinus
ENSPMAG00000003209	POP1	100	42.857	ENSECAG00000024236	POP1	90	42.573	Equus_caballus
ENSPMAG00000003209	POP1	57	54.930	ENSEEUG00000003050	-	53	54.930	Erinaceus_europaeus
ENSPMAG00000003209	POP1	100	41.441	ENSELUG00000003526	pop1	91	41.754	Esox_lucius
ENSPMAG00000003209	POP1	100	43.803	ENSFCAG00000002168	POP1	90	43.849	Felis_catus
ENSPMAG00000003209	POP1	99	42.166	ENSFALG00000005711	POP1	90	42.061	Ficedula_albicollis
ENSPMAG00000003209	POP1	100	44.995	ENSFDAG00000017068	POP1	90	44.726	Fukomys_damarensis
ENSPMAG00000003209	POP1	99	42.977	ENSFHEG00000019518	pop1	92	42.947	Fundulus_heteroclitus
ENSPMAG00000003209	POP1	99	41.009	ENSGMOG00000000659	POP1	94	41.207	Gadus_morhua
ENSPMAG00000003209	POP1	99	43.776	ENSGAFG00000019770	POP1	91	43.770	Gambusia_affinis
ENSPMAG00000003209	POP1	99	41.096	ENSGACG00000003499	pop1	90	41.189	Gasterosteus_aculeatus
ENSPMAG00000003209	POP1	100	44.105	ENSGAGG00000011737	POP1	88	43.704	Gopherus_agassizii
ENSPMAG00000003209	POP1	100	44.093	ENSGGOG00000003176	POP1	90	44.139	Gorilla_gorilla
ENSPMAG00000003209	POP1	99	42.555	ENSHBUG00000021583	pop1	91	42.738	Haplochromis_burtoni
ENSPMAG00000003209	POP1	99	43.298	ENSHGLG00000006029	POP1	90	43.684	Heterocephalus_glaber_female
ENSPMAG00000003209	POP1	99	43.298	ENSHGLG00100016879	POP1	90	43.684	Heterocephalus_glaber_male
ENSPMAG00000003209	POP1	100	41.786	ENSHCOG00000013888	pop1	96	41.443	Hippocampus_comes
ENSPMAG00000003209	POP1	99	39.333	ENSIPUG00000018336	pop1	93	39.200	Ictalurus_punctatus
ENSPMAG00000003209	POP1	100	42.978	ENSSTOG00000011455	POP1	87	42.736	Ictidomys_tridecemlineatus
ENSPMAG00000003209	POP1	100	42.173	ENSJJAG00000013325	Pop1	89	42.066	Jaculus_jaculus
ENSPMAG00000003209	POP1	100	42.332	ENSKMAG00000001346	POP1	91	42.332	Kryptolebias_marmoratus
ENSPMAG00000003209	POP1	99	42.353	ENSLBEG00000024457	POP1	94	42.630	Labrus_bergylta
ENSPMAG00000003209	POP1	100	42.973	ENSLACG00000012498	POP1	96	43.377	Latimeria_chalumnae
ENSPMAG00000003209	POP1	100	43.582	ENSLOCG00000009817	POP1	90	43.685	Lepisosteus_oculatus
ENSPMAG00000003209	POP1	100	44.269	ENSLAFG00000010770	POP1	90	44.491	Loxodonta_africana
ENSPMAG00000003209	POP1	100	44.245	ENSMFAG00000000347	POP1	90	43.823	Macaca_fascicularis
ENSPMAG00000003209	POP1	100	44.245	ENSMNEG00000036870	POP1	90	43.611	Macaca_nemestrina
ENSPMAG00000003209	POP1	100	44.351	ENSMLEG00000034986	POP1	90	43.928	Mandrillus_leucophaeus
ENSPMAG00000003209	POP1	99	42.902	ENSMAMG00000004040	pop1	91	42.573	Mastacembelus_armatus
ENSPMAG00000003209	POP1	99	42.827	ENSMZEG00005025448	pop1	91	42.947	Maylandia_zebra
ENSPMAG00000003209	POP1	99	40.538	ENSMGAG00000012167	POP1	90	41.262	Meleagris_gallopavo
ENSPMAG00000003209	POP1	100	44.315	ENSMAUG00000017537	Pop1	90	44.315	Mesocricetus_auratus
ENSPMAG00000003209	POP1	100	44.328	ENSMICG00000004361	POP1	90	44.046	Microcebus_murinus
ENSPMAG00000003209	POP1	100	43.983	ENSMOCG00000006356	Pop1	90	44.089	Microtus_ochrogaster
ENSPMAG00000003209	POP1	99	41.764	ENSMMOG00000018242	pop1	93	41.826	Mola_mola
ENSPMAG00000003209	POP1	100	42.316	ENSMODG00000006561	POP1	89	41.973	Monodelphis_domestica
ENSPMAG00000003209	POP1	99	44.080	ENSMALG00000012621	POP1	91	43.750	Monopterus_albus
ENSPMAG00000003209	POP1	100	44.480	MGP_CAROLIEiJ_G0019726	Pop1	90	44.421	Mus_caroli
ENSPMAG00000003209	POP1	100	43.677	ENSMUSG00000022325	Pop1	90	43.418	Mus_musculus
ENSPMAG00000003209	POP1	100	43.298	MGP_PahariEiJ_G0019735	Pop1	90	43.143	Mus_pahari
ENSPMAG00000003209	POP1	100	43.650	MGP_SPRETEiJ_G0020622	Pop1	90	43.598	Mus_spretus
ENSPMAG00000003209	POP1	100	43.658	ENSMPUG00000015250	POP1	90	43.538	Mustela_putorius_furo
ENSPMAG00000003209	POP1	100	43.592	ENSMLUG00000010204	POP1	90	43.277	Myotis_lucifugus
ENSPMAG00000003209	POP1	100	43.665	ENSNGAG00000001582	Pop1	90	43.246	Nannospalax_galili
ENSPMAG00000003209	POP1	99	41.925	ENSNBRG00000002356	pop1	94	42.116	Neolamprologus_brichardi
ENSPMAG00000003209	POP1	100	43.750	ENSNLEG00000002541	POP1	90	43.717	Nomascus_leucogenys
ENSPMAG00000003209	POP1	100	39.140	ENSMEUG00000003118	POP1	94	39.474	Notamacropus_eugenii
ENSPMAG00000003209	POP1	100	43.579	ENSOPRG00000007667	POP1	90	43.263	Ochotona_princeps
ENSPMAG00000003209	POP1	99	43.390	ENSODEG00000003984	POP1	90	43.354	Octodon_degus
ENSPMAG00000003209	POP1	99	42.827	ENSONIG00000016445	pop1	91	42.738	Oreochromis_niloticus
ENSPMAG00000003209	POP1	55	67.797	ENSOANG00000001278	-	79	67.797	Ornithorhynchus_anatinus
ENSPMAG00000003209	POP1	100	43.533	ENSOCUG00000017400	POP1	90	43.816	Oryctolagus_cuniculus
ENSPMAG00000003209	POP1	100	44.293	ENSORLG00000002839	pop1	93	44.235	Oryzias_latipes
ENSPMAG00000003209	POP1	100	42.166	ENSORLG00020022450	POP1	96	42.542	Oryzias_latipes_hni
ENSPMAG00000003209	POP1	100	43.828	ENSORLG00015012746	POP1	92	43.920	Oryzias_latipes_hsok
ENSPMAG00000003209	POP1	99	42.812	ENSOMEG00000006915	pop1	92	42.842	Oryzias_melastigma
ENSPMAG00000003209	POP1	100	42.450	ENSOGAG00000001466	POP1	90	42.587	Otolemur_garnettii
ENSPMAG00000003209	POP1	100	43.987	ENSPPAG00000018410	POP1	90	44.245	Pan_paniscus
ENSPMAG00000003209	POP1	100	43.547	ENSPPRG00000005002	POP1	90	43.487	Panthera_pardus
ENSPMAG00000003209	POP1	100	43.652	ENSPTIG00000016527	POP1	90	43.487	Panthera_tigris_altaica
ENSPMAG00000003209	POP1	100	44.093	ENSPTRG00000020458	POP1	90	44.351	Pan_troglodytes
ENSPMAG00000003209	POP1	100	44.562	ENSPANG00000009704	POP1	90	44.139	Papio_anubis
ENSPMAG00000003209	POP1	100	44.008	ENSPKIG00000016325	POP1	91	43.704	Paramormyrops_kingsleyae
ENSPMAG00000003209	POP1	100	43.129	ENSPSIG00000012343	POP1	89	43.340	Pelodiscus_sinensis
ENSPMAG00000003209	POP1	100	42.284	ENSPMGG00000022253	POP1	95	42.208	Periophthalmus_magnuspinnatus
ENSPMAG00000003209	POP1	100	43.532	ENSPEMG00000023633	Pop1	90	43.433	Peromyscus_maniculatus_bairdii
ENSPMAG00000003209	POP1	100	44.084	ENSPCIG00000012216	POP1	89	43.455	Phascolarctos_cinereus
ENSPMAG00000003209	POP1	99	43.129	ENSPFOG00000012490	POP1	91	43.022	Poecilia_formosa
ENSPMAG00000003209	POP1	99	43.129	ENSPLAG00000004646	POP1	91	43.022	Poecilia_latipinna
ENSPMAG00000003209	POP1	99	43.823	ENSPMEG00000019592	POP1	91	43.442	Poecilia_mexicana
ENSPMAG00000003209	POP1	99	43.717	ENSPREG00000020951	POP1	91	43.442	Poecilia_reticulata
ENSPMAG00000003209	POP1	100	44.198	ENSPPYG00000018777	POP1	90	44.245	Pongo_abelii
ENSPMAG00000003209	POP1	100	42.649	ENSPCAG00000016662	POP1	90	42.529	Procavia_capensis
ENSPMAG00000003209	POP1	100	44.118	ENSPCOG00000019420	POP1	90	43.836	Propithecus_coquereli
ENSPMAG00000003209	POP1	100	43.323	ENSPVAG00000014468	POP1	90	43.487	Pteropus_vampyrus
ENSPMAG00000003209	POP1	99	42.918	ENSPNYG00000004476	pop1	95	43.098	Pundamilia_nyererei
ENSPMAG00000003209	POP1	100	40.283	ENSPNAG00000000265	pop1	83	53.659	Pygocentrus_nattereri
ENSPMAG00000003209	POP1	100	44.068	ENSRNOG00000005243	Pop1	90	44.068	Rattus_norvegicus
ENSPMAG00000003209	POP1	100	43.717	ENSRBIG00000007996	POP1	90	43.823	Rhinopithecus_bieti
ENSPMAG00000003209	POP1	100	43.432	ENSRROG00000012334	POP1	90	43.538	Rhinopithecus_roxellana
ENSPMAG00000003209	POP1	100	43.776	ENSSBOG00000020830	POP1	91	43.446	Saimiri_boliviensis_boliviensis
ENSPMAG00000003209	POP1	100	43.203	ENSSHAG00000000296	POP1	89	43.414	Sarcophilus_harrisii
ENSPMAG00000003209	POP1	100	43.757	ENSSFOG00015007429	pop1	90	43.652	Scleropages_formosus
ENSPMAG00000003209	POP1	99	42.402	ENSSMAG00000010467	POP1	95	42.630	Scophthalmus_maximus
ENSPMAG00000003209	POP1	99	42.962	ENSSDUG00000007817	POP1	91	43.066	Seriola_dumerili
ENSPMAG00000003209	POP1	99	42.618	ENSSLDG00000012565	POP1	91	42.531	Seriola_lalandi_dorsalis
ENSPMAG00000003209	POP1	100	40.609	ENSSPUG00000003550	-	90	40.399	Sphenodon_punctatus
ENSPMAG00000003209	POP1	100	42.466	ENSSPAG00000014955	pop1	94	42.255	Stegastes_partitus
ENSPMAG00000003209	POP1	100	43.400	ENSSSCG00000006078	POP1	90	43.823	Sus_scrofa
ENSPMAG00000003209	POP1	99	39.076	ENSTGUG00000012011	-	98	38.971	Taeniopygia_guttata
ENSPMAG00000003209	POP1	99	43.098	ENSTRUG00000010856	pop1	92	42.887	Takifugu_rubripes
ENSPMAG00000003209	POP1	100	43.365	ENSTNIG00000013297	pop1	96	43.587	Tetraodon_nigroviridis
ENSPMAG00000003209	POP1	100	42.616	ENSTBEG00000014214	POP1	94	42.571	Tupaia_belangeri
ENSPMAG00000003209	POP1	100	42.055	ENSTTRG00000016071	POP1	90	42.011	Tursiops_truncatus
ENSPMAG00000003209	POP1	100	43.368	ENSUAMG00000017309	POP1	94	43.368	Ursus_americanus
ENSPMAG00000003209	POP1	99	46.635	ENSUMAG00000016952	POP1	89	46.635	Ursus_maritimus
ENSPMAG00000003209	POP1	80	60.234	ENSVPAG00000008278	POP1	72	60.234	Vicugna_pacos
ENSPMAG00000003209	POP1	100	43.326	ENSVVUG00000010994	POP1	90	42.963	Vulpes_vulpes
ENSPMAG00000003209	POP1	99	39.532	ENSXCOG00000017043	POP1	90	39.305	Xiphophorus_couchianus
ENSPMAG00000003209	POP1	99	43.810	ENSXMAG00000002472	POP1	91	43.547	Xiphophorus_maculatus