EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 46887 bases
Position: chrGL477666:13286-60172
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003531	R3H	PF01424.22	1.6e-10	1	1
ENSPMAP00000003531	DEAD	PF00270.29	6.8e-07	1	1
ENSPMAP00000003531	YTH	PF04146.15	2.1e-39	1	1
ENSPMAP00000003531	HA2	PF04408.23	3.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003546	-	4242	-	ENSPMAP00000003531	1414 (aa)	-	S4RE99

Gene Model

Click here to download ENSPMAG00000003218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003218	-	98	62.849	ENSG00000047188	YTHDC2	99	62.509	Homo_sapiens
ENSPMAG00000003218	-	72	54.252	ENSAPOG00000013442	YTHDC2	90	56.146	Acanthochromis_polyacanthus
ENSPMAG00000003218	-	98	62.923	ENSAMEG00000006598	YTHDC2	97	63.378	Ailuropoda_melanoleuca
ENSPMAG00000003218	-	98	55.508	ENSACIG00000012809	YTHDC2	98	55.324	Amphilophus_citrinellus
ENSPMAG00000003218	-	87	63.504	ENSAOCG00000018480	YTHDC2	99	63.504	Amphiprion_ocellaris
ENSPMAG00000003218	-	95	63.504	ENSAPEG00000014873	YTHDC2	99	63.504	Amphiprion_percula
ENSPMAG00000003218	-	98	54.772	ENSATEG00000010847	YTHDC2	97	54.597	Anabas_testudineus
ENSPMAG00000003218	-	98	62.330	ENSACAG00000007754	YTHDC2	97	62.385	Anolis_carolinensis
ENSPMAG00000003218	-	98	60.916	ENSANAG00000022177	YTHDC2	98	60.967	Aotus_nancymaae
ENSPMAG00000003218	-	100	54.167	ENSACLG00000019069	YTHDC2	93	67.717	Astatotilapia_calliptera
ENSPMAG00000003218	-	100	61.166	ENSAMXG00000008735	YTHDC2	99	61.056	Astyanax_mexicanus
ENSPMAG00000003218	-	98	63.181	ENSBTAG00000014099	YTHDC2	99	63.123	Bos_taurus
ENSPMAG00000003218	-	98	61.219	ENSCJAG00000016598	YTHDC2	99	60.955	Callithrix_jacchus
ENSPMAG00000003218	-	98	60.258	ENSCAFG00000000224	YTHDC2	99	66.030	Canis_familiaris
ENSPMAG00000003218	-	98	63.259	ENSCAFG00020003668	YTHDC2	98	63.565	Canis_lupus_dingo
ENSPMAG00000003218	-	98	62.437	ENSCHIG00000026651	YTHDC2	99	62.439	Capra_hircus
ENSPMAG00000003218	-	97	63.341	ENSTSYG00000009634	YTHDC2	98	63.557	Carlito_syrichta
ENSPMAG00000003218	-	76	52.866	ENSCAPG00000015691	YTHDC2	86	52.622	Cavia_aperea
ENSPMAG00000003218	-	98	62.904	ENSCPOG00000000272	YTHDC2	99	62.483	Cavia_porcellus
ENSPMAG00000003218	-	98	62.867	ENSCCAG00000037613	YTHDC2	99	62.815	Cebus_capucinus
ENSPMAG00000003218	-	98	62.921	ENSCATG00000031670	YTHDC2	99	62.789	Cercocebus_atys
ENSPMAG00000003218	-	98	62.047	ENSCLAG00000014076	YTHDC2	99	61.650	Chinchilla_lanigera
ENSPMAG00000003218	-	98	62.921	ENSCSAG00000014899	YTHDC2	99	62.859	Chlorocebus_sabaeus
ENSPMAG00000003218	-	83	69.231	ENSCHOG00000013323	YTHDC2	87	67.176	Choloepus_hoffmanni
ENSPMAG00000003218	-	98	62.069	ENSCPBG00000013876	YTHDC2	99	61.878	Chrysemys_picta_bellii
ENSPMAG00000003218	-	98	62.634	ENSCANG00000025759	YTHDC2	99	62.631	Colobus_angolensis_palliatus
ENSPMAG00000003218	-	98	62.939	ENSCGRG00001021338	Ythdc2	99	62.683	Cricetulus_griseus_chok1gshd
ENSPMAG00000003218	-	98	62.222	ENSCGRG00000010336	Ythdc2	99	61.985	Cricetulus_griseus_crigri
ENSPMAG00000003218	-	83	46.244	ENSCSEG00000017911	YTHDC2	99	46.244	Cynoglossus_semilaevis
ENSPMAG00000003218	-	99	54.290	ENSCVAG00000021377	YTHDC2	99	54.231	Cyprinodon_variegatus
ENSPMAG00000003218	-	98	53.544	ENSDARG00000103525	YTHDC2	98	53.602	Danio_rerio
ENSPMAG00000003218	-	98	61.175	ENSDNOG00000012198	YTHDC2	99	61.189	Dasypus_novemcinctus
ENSPMAG00000003218	-	96	60.701	ENSDORG00000007057	Ythdc2	97	60.384	Dipodomys_ordii
ENSPMAG00000003218	-	63	34.271	FBgn0030833	CG8915	87	34.271	Drosophila_melanogaster
ENSPMAG00000003218	-	81	69.784	ENSETEG00000013681	YTHDC2	81	69.784	Echinops_telfairi
ENSPMAG00000003218	-	91	50.733	ENSEBUG00000014315	-	86	56.919	Eptatretus_burgeri
ENSPMAG00000003218	-	98	63.011	ENSEASG00005015135	YTHDC2	99	62.474	Equus_asinus_asinus
ENSPMAG00000003218	-	98	62.939	ENSECAG00000020630	YTHDC2	99	62.500	Equus_caballus
ENSPMAG00000003218	-	79	66.667	ENSEEUG00000008580	YTHDC2	81	64.485	Erinaceus_europaeus
ENSPMAG00000003218	-	100	60.315	ENSELUG00000015902	YTHDC2	99	60.027	Esox_lucius
ENSPMAG00000003218	-	98	62.814	ENSFCAG00000031967	YTHDC2	99	62.781	Felis_catus
ENSPMAG00000003218	-	92	60.576	ENSFALG00000002623	-	99	60.731	Ficedula_albicollis
ENSPMAG00000003218	-	96	60.617	ENSFALG00000000040	-	99	60.838	Ficedula_albicollis
ENSPMAG00000003218	-	98	62.168	ENSFDAG00000008701	YTHDC2	99	62.742	Fukomys_damarensis
ENSPMAG00000003218	-	99	55.221	ENSFHEG00000009312	YTHDC2	99	53.997	Fundulus_heteroclitus
ENSPMAG00000003218	-	98	60.735	ENSGALG00000000189	YTHDC2	99	60.704	Gallus_gallus
ENSPMAG00000003218	-	85	64.286	ENSGAFG00000008158	YTHDC2	92	64.286	Gambusia_affinis
ENSPMAG00000003218	-	96	62.023	ENSGAGG00000010063	YTHDC2	99	62.637	Gopherus_agassizii
ENSPMAG00000003218	-	98	62.921	ENSGGOG00000014407	YTHDC2	99	62.789	Gorilla_gorilla
ENSPMAG00000003218	-	84	55.789	ENSHBUG00000007492	YTHDC2	94	55.789	Haplochromis_burtoni
ENSPMAG00000003218	-	98	62.455	ENSHGLG00000019014	YTHDC2	99	62.308	Heterocephalus_glaber_female
ENSPMAG00000003218	-	98	62.455	ENSHGLG00100008192	YTHDC2	99	62.308	Heterocephalus_glaber_male
ENSPMAG00000003218	-	90	62.992	ENSHCOG00000014281	YTHDC2	94	62.992	Hippocampus_comes
ENSPMAG00000003218	-	100	58.992	ENSIPUG00000019561	ythdc2	97	58.869	Ictalurus_punctatus
ENSPMAG00000003218	-	98	61.649	ENSSTOG00000013239	YTHDC2	99	61.158	Ictidomys_tridecemlineatus
ENSPMAG00000003218	-	98	60.699	ENSJJAG00000017908	Ythdc2	97	61.131	Jaculus_jaculus
ENSPMAG00000003218	-	99	54.379	ENSKMAG00000015969	YTHDC2	98	54.340	Kryptolebias_marmoratus
ENSPMAG00000003218	-	100	56.246	ENSLBEG00000027926	YTHDC2	99	55.116	Labrus_bergylta
ENSPMAG00000003218	-	99	63.733	ENSLACG00000010991	YTHDC2	98	64.184	Latimeria_chalumnae
ENSPMAG00000003218	-	98	60.541	ENSLOCG00000009001	YTHDC2	98	59.622	Lepisosteus_oculatus
ENSPMAG00000003218	-	89	63.407	ENSLAFG00000003538	YTHDC2	98	64.009	Loxodonta_africana
ENSPMAG00000003218	-	98	62.921	ENSMNEG00000040900	YTHDC2	99	62.789	Macaca_nemestrina
ENSPMAG00000003218	-	98	62.921	ENSMLEG00000043185	YTHDC2	99	62.789	Mandrillus_leucophaeus
ENSPMAG00000003218	-	98	55.214	ENSMAMG00000019193	YTHDC2	98	55.214	Mastacembelus_armatus
ENSPMAG00000003218	-	91	67.460	ENSMZEG00005009153	YTHDC2	98	55.025	Maylandia_zebra
ENSPMAG00000003218	-	94	55.308	ENSMGAG00000006674	YTHDC2	99	57.482	Meleagris_gallopavo
ENSPMAG00000003218	-	98	62.867	ENSMAUG00000016179	Ythdc2	96	63.281	Mesocricetus_auratus
ENSPMAG00000003218	-	98	62.939	ENSMICG00000004030	YTHDC2	96	66.197	Microcebus_murinus
ENSPMAG00000003218	-	98	63.154	ENSMOCG00000011740	Ythdc2	99	62.805	Microtus_ochrogaster
ENSPMAG00000003218	-	83	55.396	ENSMMOG00000011758	YTHDC2	93	55.396	Mola_mola
ENSPMAG00000003218	-	98	62.723	ENSMODG00000015671	YTHDC2	97	62.879	Monodelphis_domestica
ENSPMAG00000003218	-	82	57.204	ENSMALG00000002782	YTHDC2	93	57.204	Monopterus_albus
ENSPMAG00000003218	-	98	62.939	MGP_CAROLIEiJ_G0022248	Ythdc2	98	69.965	Mus_caroli
ENSPMAG00000003218	-	98	62.939	ENSMUSG00000034653	Ythdc2	98	69.965	Mus_musculus
ENSPMAG00000003218	-	98	63.011	MGP_PahariEiJ_G0018981	Ythdc2	98	69.965	Mus_pahari
ENSPMAG00000003218	-	98	62.939	MGP_SPRETEiJ_G0023159	Ythdc2	98	69.965	Mus_spretus
ENSPMAG00000003218	-	96	62.830	ENSMPUG00000000755	YTHDC2	98	63.416	Mustela_putorius_furo
ENSPMAG00000003218	-	98	62.679	ENSMLUG00000006106	YTHDC2	99	62.004	Myotis_lucifugus
ENSPMAG00000003218	-	98	62.634	ENSNGAG00000017798	Ythdc2	99	62.596	Nannospalax_galili
ENSPMAG00000003218	-	98	52.224	ENSNBRG00000000762	YTHDC2	89	56.518	Neolamprologus_brichardi
ENSPMAG00000003218	-	98	62.276	ENSNLEG00000011648	YTHDC2	99	62.386	Nomascus_leucogenys
ENSPMAG00000003218	-	78	59.140	ENSMEUG00000004414	YTHDC2	77	60.700	Notamacropus_eugenii
ENSPMAG00000003218	-	75	91.176	ENSOPRG00000000462	YTHDC2	76	91.176	Ochotona_princeps
ENSPMAG00000003218	-	98	62.939	ENSODEG00000007804	YTHDC2	99	62.771	Octodon_degus
ENSPMAG00000003218	-	99	55.903	ENSONIG00000011601	YTHDC2	99	55.619	Oreochromis_niloticus
ENSPMAG00000003218	-	96	62.949	ENSOCUG00000012096	YTHDC2	99	63.536	Oryctolagus_cuniculus
ENSPMAG00000003218	-	93	48.947	ENSORLG00000019098	YTHDC2	90	63.592	Oryzias_latipes
ENSPMAG00000003218	-	98	49.964	ENSORLG00015000390	YTHDC2	98	49.786	Oryzias_latipes_hsok
ENSPMAG00000003218	-	98	50.325	ENSOMEG00000014221	YTHDC2	98	49.812	Oryzias_melastigma
ENSPMAG00000003218	-	98	62.912	ENSOGAG00000001618	YTHDC2	99	62.570	Otolemur_garnettii
ENSPMAG00000003218	-	97	61.661	ENSOARG00000016223	YTHDC2	97	61.669	Ovis_aries
ENSPMAG00000003218	-	98	62.921	ENSPPAG00000018854	YTHDC2	99	62.789	Pan_paniscus
ENSPMAG00000003218	-	98	62.814	ENSPPRG00000001595	YTHDC2	99	62.781	Panthera_pardus
ENSPMAG00000003218	-	96	62.803	ENSPTIG00000021801	YTHDC2	94	63.390	Panthera_tigris_altaica
ENSPMAG00000003218	-	98	62.921	ENSPTRG00000017143	YTHDC2	99	62.789	Pan_troglodytes
ENSPMAG00000003218	-	79	65.773	ENSPANG00000024470	YTHDC2	99	60.982	Papio_anubis
ENSPMAG00000003218	-	99	59.986	ENSPKIG00000016010	YTHDC2	99	59.773	Paramormyrops_kingsleyae
ENSPMAG00000003218	-	96	62.317	ENSPSIG00000014798	YTHDC2	99	62.949	Pelodiscus_sinensis
ENSPMAG00000003218	-	51	52.682	ENSPMGG00000020677	YTHDC2	98	52.682	Periophthalmus_magnuspinnatus
ENSPMAG00000003218	-	98	62.939	ENSPEMG00000018062	Ythdc2	97	63.333	Peromyscus_maniculatus_bairdii
ENSPMAG00000003218	-	98	62.841	ENSPCIG00000004342	YTHDC2	99	62.526	Phascolarctos_cinereus
ENSPMAG00000003218	-	98	54.016	ENSPFOG00000003895	YTHDC2	99	54.689	Poecilia_formosa
ENSPMAG00000003218	-	98	54.493	ENSPLAG00000007558	YTHDC2	98	54.161	Poecilia_latipinna
ENSPMAG00000003218	-	98	54.695	ENSPMEG00000015205	YTHDC2	99	54.326	Poecilia_mexicana
ENSPMAG00000003218	-	98	54.206	ENSPREG00000012096	YTHDC2	97	53.502	Poecilia_reticulata
ENSPMAG00000003218	-	98	62.143	ENSPPYG00000015691	YTHDC2	99	62.028	Pongo_abelii
ENSPMAG00000003218	-	88	53.435	ENSPCAG00000007733	YTHDC2	89	55.786	Procavia_capensis
ENSPMAG00000003218	-	93	57.994	ENSPCOG00000017526	YTHDC2	96	57.984	Propithecus_coquereli
ENSPMAG00000003218	-	87	69.784	ENSPVAG00000012364	YTHDC2	88	69.784	Pteropus_vampyrus
ENSPMAG00000003218	-	98	54.356	ENSPNYG00000006908	YTHDC2	96	53.963	Pundamilia_nyererei
ENSPMAG00000003218	-	98	60.569	ENSPNAG00000010128	YTHDC2	98	60.873	Pygocentrus_nattereri
ENSPMAG00000003218	-	85	64.167	ENSRNOG00000039241	Ythdc2	97	62.600	Rattus_norvegicus
ENSPMAG00000003218	-	98	61.637	ENSRBIG00000040291	YTHDC2	99	61.490	Rhinopithecus_bieti
ENSPMAG00000003218	-	98	62.921	ENSRROG00000039477	YTHDC2	99	62.955	Rhinopithecus_roxellana
ENSPMAG00000003218	-	98	63.082	ENSSBOG00000023829	YTHDC2	99	63.069	Saimiri_boliviensis_boliviensis
ENSPMAG00000003218	-	98	62.643	ENSSHAG00000003101	YTHDC2	99	62.879	Sarcophilus_harrisii
ENSPMAG00000003218	-	100	55.791	ENSSFOG00015003572	ythdc2	99	55.720	Scleropages_formosus
ENSPMAG00000003218	-	82	49.697	ENSSMAG00000011225	YTHDC2	97	48.497	Scophthalmus_maximus
ENSPMAG00000003218	-	99	54.393	ENSSDUG00000021389	YTHDC2	98	54.552	Seriola_dumerili
ENSPMAG00000003218	-	98	56.125	ENSSLDG00000022840	YTHDC2	98	56.125	Seriola_lalandi_dorsalis
ENSPMAG00000003218	-	84	70.504	ENSSARG00000000924	YTHDC2	88	70.504	Sorex_araneus
ENSPMAG00000003218	-	52	60.027	ENSSPUG00000015912	-	99	60.565	Sphenodon_punctatus
ENSPMAG00000003218	-	100	54.164	ENSSPAG00000014889	YTHDC2	99	53.997	Stegastes_partitus
ENSPMAG00000003218	-	98	63.029	ENSSSCG00000014211	YTHDC2	99	63.394	Sus_scrofa
ENSPMAG00000003218	-	94	60.271	ENSTGUG00000003755	-	99	60.346	Taeniopygia_guttata
ENSPMAG00000003218	-	71	59.347	ENSTGUG00000014992	-	97	60.366	Taeniopygia_guttata
ENSPMAG00000003218	-	99	50.908	ENSTRUG00000006717	YTHDC2	96	63.710	Takifugu_rubripes
ENSPMAG00000003218	-	94	52.381	ENSTNIG00000003707	YTHDC2	99	52.232	Tetraodon_nigroviridis
ENSPMAG00000003218	-	85	62.451	ENSTBEG00000006872	YTHDC2	87	63.316	Tupaia_belangeri
ENSPMAG00000003218	-	83	68.345	ENSTTRG00000003116	YTHDC2	83	68.345	Tursiops_truncatus
ENSPMAG00000003218	-	74	65.877	ENSUAMG00000003688	YTHDC2	99	64.917	Ursus_americanus
ENSPMAG00000003218	-	97	62.974	ENSUMAG00000023877	YTHDC2	99	63.537	Ursus_maritimus
ENSPMAG00000003218	-	94	61.262	ENSVPAG00000007516	YTHDC2	95	61.915	Vicugna_pacos
ENSPMAG00000003218	-	98	63.173	ENSVVUG00000000281	YTHDC2	99	63.043	Vulpes_vulpes
ENSPMAG00000003218	-	100	58.188	ENSXETG00000021517	ythdc2	99	58.258	Xenopus_tropicalis
ENSPMAG00000003218	-	90	60.839	ENSXCOG00000016406	YTHDC2	94	62.222	Xiphophorus_couchianus
ENSPMAG00000003218	-	98	54.487	ENSXMAG00000007618	YTHDC2	97	54.155	Xiphophorus_maculatus