EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000003258 (Gene tree)
Gene ID: -
Gene Symbol: riok3
Alias: -
Full Name: RIO kinase 3 (yeast)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5094 bases
Position: chrGL478057:49341-54434
Accession: ZDB-GENE-040801-133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003602	RIO1	PF01163.22	3.3e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003617	-	1517	-	ENSPMAP00000003602	439 (aa)	-	S4REH0

Gene Model

Click here to download ENSPMAG00000003258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003258	riok3	64	44.326	ENSPMAG00000006351	riok1	65	44.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003258	riok3	97	72.286	ENSG00000101782	RIOK3	85	72.093	Homo_sapiens
ENSPMAG00000003258	riok3	99	70.413	ENSAPOG00000020861	riok3	85	70.413	Acanthochromis_polyacanthus
ENSPMAG00000003258	riok3	97	72.055	ENSAMEG00000013754	RIOK3	71	72.055	Ailuropoda_melanoleuca
ENSPMAG00000003258	riok3	98	71.759	ENSACIG00000019894	riok3	86	71.759	Amphilophus_citrinellus
ENSPMAG00000003258	riok3	99	71.330	ENSAOCG00000007172	riok3	89	70.183	Amphiprion_ocellaris
ENSPMAG00000003258	riok3	99	71.101	ENSAPEG00000002536	riok3	89	69.266	Amphiprion_percula
ENSPMAG00000003258	riok3	99	70.575	ENSATEG00000018303	riok3	86	70.575	Anabas_testudineus
ENSPMAG00000003258	riok3	97	71.163	ENSAPLG00000006497	RIOK3	83	71.163	Anas_platyrhynchos
ENSPMAG00000003258	riok3	97	72.131	ENSACAG00000000159	RIOK3	82	72.131	Anolis_carolinensis
ENSPMAG00000003258	riok3	83	62.097	ENSANAG00000030146	RIOK3	80	62.097	Aotus_nancymaae
ENSPMAG00000003258	riok3	98	71.230	ENSACLG00000018966	riok3	88	71.230	Astatotilapia_calliptera
ENSPMAG00000003258	riok3	98	72.093	ENSAMXG00000015617	riok3	85	72.093	Astyanax_mexicanus
ENSPMAG00000003258	riok3	97	71.824	ENSBTAG00000010042	RIOK3	83	71.824	Bos_taurus
ENSPMAG00000003258	riok3	93	37.825	WBGene00014012	riok-3	77	37.825	Caenorhabditis_elegans
ENSPMAG00000003258	riok3	97	72.055	ENSCJAG00000020556	RIOK3	83	72.055	Callithrix_jacchus
ENSPMAG00000003258	riok3	97	71.824	ENSCAFG00000018201	RIOK3	83	71.824	Canis_familiaris
ENSPMAG00000003258	riok3	97	72.196	ENSCAFG00020014801	RIOK3	91	74.202	Canis_lupus_dingo
ENSPMAG00000003258	riok3	97	72.055	ENSCHIG00000009312	RIOK3	86	72.055	Capra_hircus
ENSPMAG00000003258	riok3	97	72.748	ENSTSYG00000000142	RIOK3	84	75.266	Carlito_syrichta
ENSPMAG00000003258	riok3	97	72.517	ENSCAPG00000005756	RIOK3	89	72.517	Cavia_aperea
ENSPMAG00000003258	riok3	97	72.517	ENSCPOG00000007991	RIOK3	83	72.517	Cavia_porcellus
ENSPMAG00000003258	riok3	97	72.055	ENSCCAG00000028338	RIOK3	84	74.074	Cebus_capucinus
ENSPMAG00000003258	riok3	97	72.517	ENSCATG00000040824	RIOK3	85	74.734	Cercocebus_atys
ENSPMAG00000003258	riok3	97	72.517	ENSCLAG00000006767	RIOK3	83	72.517	Chinchilla_lanigera
ENSPMAG00000003258	riok3	97	72.055	ENSCSAG00000017680	RIOK3	83	72.055	Chlorocebus_sabaeus
ENSPMAG00000003258	riok3	84	73.367	ENSCHOG00000008343	RIOK3	71	73.367	Choloepus_hoffmanni
ENSPMAG00000003258	riok3	96	74.118	ENSCPBG00000027226	RIOK3	82	74.118	Chrysemys_picta_bellii
ENSPMAG00000003258	riok3	98	51.327	ENSCSAVG00000003068	-	92	52.928	Ciona_savignyi
ENSPMAG00000003258	riok3	95	60.284	ENSCANG00000035939	RIOK3	78	75.338	Colobus_angolensis_palliatus
ENSPMAG00000003258	riok3	97	71.824	ENSCGRG00001013249	Riok3	83	71.824	Cricetulus_griseus_chok1gshd
ENSPMAG00000003258	riok3	99	70.522	ENSCGRG00000017636	Riok3	83	71.594	Cricetulus_griseus_crigri
ENSPMAG00000003258	riok3	99	68.276	ENSCSEG00000018289	riok3	91	67.890	Cynoglossus_semilaevis
ENSPMAG00000003258	riok3	98	68.822	ENSCVAG00000011848	riok3	85	68.822	Cyprinodon_variegatus
ENSPMAG00000003258	riok3	97	70.588	ENSDARG00000042751	riok3	84	70.588	Danio_rerio
ENSPMAG00000003258	riok3	97	71.824	ENSDNOG00000039433	RIOK3	83	71.824	Dasypus_novemcinctus
ENSPMAG00000003258	riok3	97	71.824	ENSDORG00000011663	Riok3	83	71.824	Dipodomys_ordii
ENSPMAG00000003258	riok3	93	46.437	FBgn0031643	CG3008	70	46.991	Drosophila_melanogaster
ENSPMAG00000003258	riok3	93	72.816	ENSETEG00000003689	RIOK3	85	72.816	Echinops_telfairi
ENSPMAG00000003258	riok3	97	58.275	ENSEBUG00000000555	riok3	85	58.275	Eptatretus_burgeri
ENSPMAG00000003258	riok3	97	72.286	ENSEASG00005002317	RIOK3	84	72.286	Equus_asinus_asinus
ENSPMAG00000003258	riok3	97	72.286	ENSECAG00000009028	RIOK3	84	72.286	Equus_caballus
ENSPMAG00000003258	riok3	89	64.141	ENSEEUG00000007005	RIOK3	79	64.141	Erinaceus_europaeus
ENSPMAG00000003258	riok3	97	70.561	ENSELUG00000017655	riok3	84	70.561	Esox_lucius
ENSPMAG00000003258	riok3	97	71.824	ENSFCAG00000000517	RIOK3	83	71.824	Felis_catus
ENSPMAG00000003258	riok3	97	72.834	ENSFALG00000006145	RIOK3	83	72.834	Ficedula_albicollis
ENSPMAG00000003258	riok3	97	71.363	ENSFDAG00000001548	RIOK3	83	71.363	Fukomys_damarensis
ENSPMAG00000003258	riok3	99	71.034	ENSFHEG00000011350	riok3	85	71.034	Fundulus_heteroclitus
ENSPMAG00000003258	riok3	96	69.431	ENSGMOG00000005157	riok3	92	69.431	Gadus_morhua
ENSPMAG00000003258	riok3	97	72.600	ENSGALG00000015004	RIOK3	83	72.600	Gallus_gallus
ENSPMAG00000003258	riok3	96	61.229	ENSGAFG00000002403	riok3	83	61.229	Gambusia_affinis
ENSPMAG00000003258	riok3	99	68.433	ENSGACG00000000880	riok3	84	68.433	Gasterosteus_aculeatus
ENSPMAG00000003258	riok3	96	74.468	ENSGAGG00000024785	RIOK3	82	74.468	Gopherus_agassizii
ENSPMAG00000003258	riok3	62	70.504	ENSGGOG00000036734	-	89	70.504	Gorilla_gorilla
ENSPMAG00000003258	riok3	98	71.230	ENSHBUG00000003233	riok3	85	71.230	Haplochromis_burtoni
ENSPMAG00000003258	riok3	97	72.517	ENSHGLG00000003885	RIOK3	83	72.517	Heterocephalus_glaber_female
ENSPMAG00000003258	riok3	97	72.517	ENSHGLG00100002077	RIOK3	83	72.517	Heterocephalus_glaber_male
ENSPMAG00000003258	riok3	98	69.838	ENSHCOG00000006794	riok3	83	69.838	Hippocampus_comes
ENSPMAG00000003258	riok3	97	69.393	ENSIPUG00000001406	Riok3	85	69.393	Ictalurus_punctatus
ENSPMAG00000003258	riok3	97	71.363	ENSSTOG00000006517	RIOK3	83	71.363	Ictidomys_tridecemlineatus
ENSPMAG00000003258	riok3	97	71.824	ENSJJAG00000023689	Riok3	83	71.824	Jaculus_jaculus
ENSPMAG00000003258	riok3	98	70.862	ENSKMAG00000007259	riok3	85	70.862	Kryptolebias_marmoratus
ENSPMAG00000003258	riok3	98	69.444	ENSLBEG00000013689	riok3	85	69.444	Labrus_bergylta
ENSPMAG00000003258	riok3	97	72.066	ENSLACG00000017326	RIOK3	83	72.066	Latimeria_chalumnae
ENSPMAG00000003258	riok3	97	72.535	ENSLOCG00000001652	riok3	83	72.535	Lepisosteus_oculatus
ENSPMAG00000003258	riok3	97	71.594	ENSLAFG00000001380	RIOK3	83	71.594	Loxodonta_africana
ENSPMAG00000003258	riok3	97	72.286	ENSMMUG00000021478	RIOK3	85	74.734	Macaca_mulatta
ENSPMAG00000003258	riok3	85	72.897	ENSMNEG00000041106	RIOK3	81	72.897	Macaca_nemestrina
ENSPMAG00000003258	riok3	97	72.286	ENSMLEG00000028187	RIOK3	85	74.734	Mandrillus_leucophaeus
ENSPMAG00000003258	riok3	97	71.663	ENSMAMG00000008502	riok3	84	71.663	Mastacembelus_armatus
ENSPMAG00000003258	riok3	98	71.230	ENSMZEG00005020212	riok3	85	71.230	Maylandia_zebra
ENSPMAG00000003258	riok3	97	72.261	ENSMGAG00000010079	RIOK3	83	72.261	Meleagris_gallopavo
ENSPMAG00000003258	riok3	97	71.594	ENSMAUG00000020527	Riok3	83	71.594	Mesocricetus_auratus
ENSPMAG00000003258	riok3	97	72.055	ENSMICG00000009293	RIOK3	83	72.055	Microcebus_murinus
ENSPMAG00000003258	riok3	95	71.631	ENSMOCG00000012114	Riok3	79	71.631	Microtus_ochrogaster
ENSPMAG00000003258	riok3	98	66.821	ENSMMOG00000019204	riok3	88	66.821	Mola_mola
ENSPMAG00000003258	riok3	97	73.441	ENSMODG00000021496	RIOK3	83	73.441	Monodelphis_domestica
ENSPMAG00000003258	riok3	98	68.981	ENSMALG00000020848	riok3	88	68.981	Monopterus_albus
ENSPMAG00000003258	riok3	97	71.363	MGP_CAROLIEiJ_G0022001	Riok3	83	71.363	Mus_caroli
ENSPMAG00000003258	riok3	97	71.363	ENSMUSG00000024404	Riok3	100	85.246	Mus_musculus
ENSPMAG00000003258	riok3	97	71.363	MGP_PahariEiJ_G0018739	Riok3	83	71.363	Mus_pahari
ENSPMAG00000003258	riok3	97	72.055	ENSMPUG00000005772	RIOK3	83	72.055	Mustela_putorius_furo
ENSPMAG00000003258	riok3	97	71.824	ENSMLUG00000007081	RIOK3	83	71.824	Myotis_lucifugus
ENSPMAG00000003258	riok3	97	71.824	ENSNGAG00000011446	Riok3	83	71.824	Nannospalax_galili
ENSPMAG00000003258	riok3	76	73.885	ENSNBRG00000016677	riok3	71	73.885	Neolamprologus_brichardi
ENSPMAG00000003258	riok3	97	71.824	ENSNLEG00000006758	RIOK3	83	74.202	Nomascus_leucogenys
ENSPMAG00000003258	riok3	97	72.748	ENSMEUG00000006292	RIOK3	83	72.748	Notamacropus_eugenii
ENSPMAG00000003258	riok3	97	71.363	ENSOPRG00000004803	RIOK3	83	71.363	Ochotona_princeps
ENSPMAG00000003258	riok3	97	72.286	ENSODEG00000006444	RIOK3	83	72.286	Octodon_degus
ENSPMAG00000003258	riok3	98	70.115	ENSONIG00000013422	riok3	87	70.115	Oreochromis_niloticus
ENSPMAG00000003258	riok3	97	71.759	ENSOANG00000012074	RIOK3	88	71.759	Ornithorhynchus_anatinus
ENSPMAG00000003258	riok3	97	71.363	ENSOCUG00000016820	RIOK3	83	71.363	Oryctolagus_cuniculus
ENSPMAG00000003258	riok3	98	70.465	ENSORLG00000003395	riok3	85	70.465	Oryzias_latipes
ENSPMAG00000003258	riok3	98	70.698	ENSORLG00020000672	riok3	85	70.698	Oryzias_latipes_hni
ENSPMAG00000003258	riok3	98	70.465	ENSORLG00015007372	riok3	85	70.465	Oryzias_latipes_hsok
ENSPMAG00000003258	riok3	99	70.507	ENSOMEG00000001380	riok3	85	70.507	Oryzias_melastigma
ENSPMAG00000003258	riok3	97	72.055	ENSOGAG00000014502	RIOK3	75	72.055	Otolemur_garnettii
ENSPMAG00000003258	riok3	97	72.055	ENSOARG00000008042	RIOK3	83	72.055	Ovis_aries
ENSPMAG00000003258	riok3	97	72.286	ENSPPAG00000030258	RIOK3	84	74.734	Pan_paniscus
ENSPMAG00000003258	riok3	97	71.594	ENSPPRG00000023302	RIOK3	83	71.594	Panthera_pardus
ENSPMAG00000003258	riok3	97	71.824	ENSPTIG00000000960	RIOK3	83	71.824	Panthera_tigris_altaica
ENSPMAG00000003258	riok3	97	72.286	ENSPTRG00000009918	RIOK3	84	74.734	Pan_troglodytes
ENSPMAG00000003258	riok3	97	72.286	ENSPANG00000011485	RIOK3	85	74.734	Papio_anubis
ENSPMAG00000003258	riok3	97	72.897	ENSPKIG00000018297	riok3	85	72.897	Paramormyrops_kingsleyae
ENSPMAG00000003258	riok3	98	72.184	ENSPSIG00000006250	RIOK3	84	72.184	Pelodiscus_sinensis
ENSPMAG00000003258	riok3	98	69.213	ENSPMGG00000009414	riok3	90	69.213	Periophthalmus_magnuspinnatus
ENSPMAG00000003258	riok3	97	71.363	ENSPEMG00000023794	Riok3	83	71.363	Peromyscus_maniculatus_bairdii
ENSPMAG00000003258	riok3	97	72.748	ENSPCIG00000013991	RIOK3	90	72.748	Phascolarctos_cinereus
ENSPMAG00000003258	riok3	98	70.766	ENSPFOG00000024127	riok3	85	70.766	Poecilia_formosa
ENSPMAG00000003258	riok3	98	70.766	ENSPLAG00000004956	riok3	85	70.766	Poecilia_latipinna
ENSPMAG00000003258	riok3	98	70.534	ENSPMEG00000020108	riok3	84	74.595	Poecilia_mexicana
ENSPMAG00000003258	riok3	98	70.370	ENSPREG00000010010	riok3	86	70.370	Poecilia_reticulata
ENSPMAG00000003258	riok3	97	65.358	ENSPPYG00000009062	RIOK3	83	65.358	Pongo_abelii
ENSPMAG00000003258	riok3	71	72.864	ENSPCAG00000001021	RIOK3	61	72.864	Procavia_capensis
ENSPMAG00000003258	riok3	97	72.286	ENSPCOG00000022631	RIOK3	84	74.468	Propithecus_coquereli
ENSPMAG00000003258	riok3	97	57.737	ENSPVAG00000015817	RIOK3	83	57.737	Pteropus_vampyrus
ENSPMAG00000003258	riok3	98	71.230	ENSPNYG00000003271	riok3	85	71.230	Pundamilia_nyererei
ENSPMAG00000003258	riok3	97	71.831	ENSPNAG00000006213	riok3	84	71.831	Pygocentrus_nattereri
ENSPMAG00000003258	riok3	97	71.594	ENSRNOG00000023376	Riok3	83	71.594	Rattus_norvegicus
ENSPMAG00000003258	riok3	97	72.055	ENSRBIG00000035071	RIOK3	85	74.734	Rhinopithecus_bieti
ENSPMAG00000003258	riok3	97	72.055	ENSRROG00000045710	RIOK3	85	74.734	Rhinopithecus_roxellana
ENSPMAG00000003258	riok3	97	72.055	ENSSBOG00000034387	RIOK3	84	74.468	Saimiri_boliviensis_boliviensis
ENSPMAG00000003258	riok3	97	72.748	ENSSHAG00000011854	RIOK3	83	72.748	Sarcophilus_harrisii
ENSPMAG00000003258	riok3	97	70.588	ENSSFOG00015012912	riok3	85	70.588	Scleropages_formosus
ENSPMAG00000003258	riok3	99	69.885	ENSSMAG00000011527	riok3	85	69.885	Scophthalmus_maximus
ENSPMAG00000003258	riok3	91	74.372	ENSSDUG00000016018	riok3	85	71.264	Seriola_dumerili
ENSPMAG00000003258	riok3	69	75.159	ENSSLDG00000022246	riok3	91	75.159	Seriola_lalandi_dorsalis
ENSPMAG00000003258	riok3	70	74.372	ENSSARG00000010154	RIOK3	60	74.372	Sorex_araneus
ENSPMAG00000003258	riok3	97	73.953	ENSSPUG00000015246	RIOK3	83	73.953	Sphenodon_punctatus
ENSPMAG00000003258	riok3	99	71.330	ENSSPAG00000000601	riok3	85	71.330	Stegastes_partitus
ENSPMAG00000003258	riok3	97	72.055	ENSSSCG00000029518	RIOK3	97	72.131	Sus_scrofa
ENSPMAG00000003258	riok3	97	72.791	ENSTGUG00000010392	RIOK3	83	72.791	Taeniopygia_guttata
ENSPMAG00000003258	riok3	98	69.355	ENSTRUG00000007055	riok3	85	69.355	Takifugu_rubripes
ENSPMAG00000003258	riok3	99	63.678	ENSTNIG00000001855	riok3	89	63.678	Tetraodon_nigroviridis
ENSPMAG00000003258	riok3	60	70.044	ENSTBEG00000015851	RIOK3	51	70.044	Tupaia_belangeri
ENSPMAG00000003258	riok3	97	72.055	ENSTTRG00000008839	RIOK3	83	72.055	Tursiops_truncatus
ENSPMAG00000003258	riok3	97	72.055	ENSUAMG00000018410	RIOK3	83	72.055	Ursus_americanus
ENSPMAG00000003258	riok3	97	72.055	ENSUMAG00000020218	RIOK3	82	72.055	Ursus_maritimus
ENSPMAG00000003258	riok3	97	72.055	ENSVPAG00000009034	RIOK3	83	72.055	Vicugna_pacos
ENSPMAG00000003258	riok3	97	71.824	ENSVVUG00000003651	RIOK3	63	71.824	Vulpes_vulpes
ENSPMAG00000003258	riok3	96	71.395	ENSXETG00000027370	riok3	83	71.395	Xenopus_tropicalis
ENSPMAG00000003258	riok3	98	69.907	ENSXCOG00000001032	riok3	88	69.907	Xiphophorus_couchianus
ENSPMAG00000003258	riok3	98	70.370	ENSXMAG00000012902	riok3	85	70.370	Xiphophorus_maculatus